Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_11g0023930 | OGI:11079800 | 8/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr11:30579793-30583811 | ||||||||
| Gene Symbol | PIKH, Pi-kh, Pi k-h, Pi54, Pi54rh, Pi-k(h), Pik-h, Pikh, LR21, Lr21, OsLr21 | ||||||||||
| DNA seq | atggcagatccagtgactgtcagtgctgcagtaggctggggcatttctgctgtaggttgggtagtctcgcccatcatcaccaacctcatcaacAAaggcttctcctacctcgatcttggccgccgtggtcgatcagccaagctgaatgaacttgagaataaagtttcagagctacgacgagttcttgaagccgttgaggagactcctgtcagggatcgcttggagccaatgttggagagacttaaatcggctttctatgaagctgaagacatattggatgatgtcgagtattaccatctcgaaaggcaggccttatttcagcccgacgacaagtttcggaggaattggatgaagaagctccagtctgccctgcccgagtgctcctgcctaaaaaaacaggtactttctatctattgtgagcaattttacgatccttttagaaggtaccatgaggtaccactttttctagtataaatttggtatctcttgatacctagatactatgaggtaccaaattgtacactaaaTttttttgtaccccatggtatgtcctcaaggaccatagaattgctcttgtattgtacaactttgtgaattgtgtgtgtgcgtatgtgctaaacagctacaatattgtattttgataggcacatagagaccgggtttatcccattttctaaaaaaaattccttataattgtgctgtgccttcaagagatttggattagtatcatagtatcagtttccaaagagcaaaggggttttccagctagctctacaacatggtaaacatggtgggctagccagcttgggttcgatgcctcaccctttttatttatttgatattagattctttcctaatatttatgtttttttctatcaatttccaaacatataacgtcccgcctttagggcatctctaagagataaggttgcatgataaggatctgaaataaagttgaatgcgttattcgaactcgaaataatttggggaatttttgacataatgtttttattaagaaattcaaaagaatattatggagtgaaatagaaAATaatttaaacagatgtttaagtcgtgtctaaaaggatttttgggaattggaattttacggaggggagatcgaatttggaaaatttgaatcctgaattttgcagttagctgaaaattttgggccaagaattttagggccacaaggaaaggaaaggatttaattaagaccttttggcacctaataattgatacagccaaacaagtgaaattttacaactaaatttatttattAaaatattttataacgtgtcctcgaaaagcagtgtgttgtagcacccccactgtgacttagtttcTtttttttttggaaacaaatagcatgagacagtgcgaagtttcaattgatatagcagaaaaaatttataagattatatccctggaatttgtatgttctgcctttctaggcattgttttgaatgtgttgtccaaacaatgcctaaaaggtatcttattcctaggccttcttctatattaggggtgatggcatgacagatgaattccaaaataaaatccttatccaaaacttgacttgctattcttttgttgttttacagaagagtactggtaggtcaagtgcacctcctgatgtgtcaaggttggcgttgaagagaattctagataagatagataacattatcaatgaagcccacagagttttgcctcctacgaacttgccaggctacactaggactgacaagaaacaaattgtttcttccagttcacgcagtgcagtcactactgcgactcctccgcctgtcttaattggccGAgacaaggatcgtgacgacatcatagctatgcttcatgagaatgtaggtgacatacaaccaggatctggaagtataattggtattcatggcattgccgggtctgggaaatctacccttgcacaacttgtttgtgccagtgagaaaaatgacaagaagaaggctgatcatttcgatcttattatgtgggttcatgtttctcagaattttagagtgcgtaccattcttaccgagatgctcgaggcagctacagggaagcaatgtgacaacttgaataatattgatatcctgatcctccaacagaatctggagggcagaactgcgtaggcatcggttcttgctggtactagatgacatctggtacgacggtcagaatcagcaggagctacagaaaatattgactccattgaaggctgggaaggcaggaagcaagattctagcaactagtcgaaacatgcacgcactgttagctctgggtgcagggagatgtattttcattatctgacatggatgacaacgtcttccttaagttattcatgcattatgcgcttgaaggtgcgaacatcgatgaacaagatcgaaggatatttgaagtgattggagttgacattgcaaaaaagctgaggaaatcacctctggcagccagaacagtaggaggacaactgcgtataagactgaatattgacttctggagggatgctcgtgatcgagaccttctgaatgagacaatgggagctctgtggtggagctaccAacatcttgatgagcaggttaggcgatgcttttcttactgcagcattttccctcgaagacatcggctgaaacgtgatgagttagttacactgtgggtggcagaagggtttattaggactagtgatcaaggagaggaggaagctgttggtcggcaatactttgacgaactagtatcgtcctcatttctgatgaagcaaactggaggtggtccaacgaattactttacagttcatgatctgctgcatgatttagcggagaaggtcgcaggaagtgattgctttagaattgagaaaggattgcaaggagttattcctccaggtgttcaccatctttctatcgagacttttgataaagaaatgattactgagaaaatttcggaaatggaaaatttacactctctgatcattcatgggagcgacatagacatgattgctgatgaaacactatttgaaagtatgttcacgaggatgaggaaattgcgggtactgagagtaaaaaccttcggattcaaacagagaaaggagttaccattcccaaactctatcagcaacttaaagcatctacgatattttggtttcgcaacgggctctacctctacttgcaagctagttttgccaagcacaatgacaaagctttaccatttgcaagtgcttgattttggttgctgcagagaTttagtgttctcctcgaaagaagatttgtgtagactcaacaacctgcggcactcaatcgctagcgatcaagagctggacatcccaaactttggcaggctgacatcactccagacgataccgttgctcacagtaaccaaggaagccgggtgcgagatacagcagctggcgcaactaaacaagcttcgaggcaggctgcagatcgagggtcttgaaaatgttgaaagcaaggaagcagctattggagcaaatcttgctgccaagaaaggcctccaagaattggtactggtatgggattggaatgatgagagctgcagcccggacgttcaagcagaggtactggagggactttgcccacccatggagcttaaaattaacactggaaatcaggggttaccgttgctcaatgtatcctagttggcttgtgggtcagctgctgaacctgaacaatggccccaagctcctgaaccaactgaaactcaacagatgcagcccattgggatctattcctcaacaaagcgagctgttcactgatctttgttcgctcgtgatttggtgttgcagctgggactccttaccagataacatggagcttctcaagtcactcgagaaactagagctatttctttgccctcaaatcttgctgcttccagtgctgcccctgtctcttaagacgtttcgactttatcgctgcagcgacgtgctcacgagttcgtgccaaacaattggttatgaaaactggcaaaagatcaagcacattccaaacaagcatttataa
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| CDS seq | atggcagatccagtgactgtcagtgctgcagtaggctggggcatttctgctgtaggttgggtagtctcgcccatcatcaccaacctcatcaacAAaggcttctcctacctcgatcttggccgccgtggtcgatcagccaagctgaatgaacttgagaataaagtttcagagctacgacgagttcttgaagccgttgaggagactcctaagagtactggtaggtcaagtgcacctcctgatgtgtcaaggttggcgttgaagagaattctagataagatagataacattatcaatgaagcccacagagttttgcctcctacgaacttgccaggctacactaggactgacaagaaacaaattgtttcttccagttcacgcagtgcagtcactactgcgactcctccgcctgtcttaattggccGAgacaaggatcgtgacgacatcatagctatgcttcatgagaatgtaggtgacatacaaccaggatctggaagtataattggtattcatggcattgccgggtctgggaaatctacccttgcacaacttgtttgtgccagtgagaaaaatgacaagaagaaggctgatcatttcgatcttattataatctggagggcagaactgcgtaggcatcggttcttgctggtactagatgacatctggtacgacggtcagaatcagcaggagctacagaaaatattgactccattgaaggctgggaaggcaggaagcaagattctagcaactagtcgaaacatgcacgcactgttagctctgggtgcagggagatgtgcgaacatcgatgaacaagatcgaaggatatttgaagtgattggagttgacattgcaaaaaagctgaggaaatcacctctggcagccagaacagtaggaggacaactgcgtataagactgaatattgacttctggagggatgctcgtgatcgagaccttctgaatgagacaatgggagctctgtggtggagctaccAacatcttgatgagcaggttaggcgatgcttttcttactgcagcattttccctcgaagacatcggctgaaacgtgatgagttagttacactgtgggtggcagaagggtttattaggactagtgatcaaggagaggaggaagctgttggtcggcaatactttgacgaactagtatcgtcctcatttctgatgaagcaaactggaggtggtccaacgaattactttacagttcatgatctgctgcatgatttagcggagaaggtcgcaggaagtgattgctttagaattgagaaaggattgcaaggagttattcctccaggtgttcaccatctttctatcgagacttttgataaagaaatgattactgagaaaatttcggaaatggaaaatttacactctctgatcattcatgggagcgacatagacatgattgctgatgaaacactatttgaaagtatgttcacgaggatgaggaaattgcgggtactgagagtaaaaaccttcggattcaaacagagaaaggagttaccattcccaaactctatcagcaacttaaagcatctacgatattttggtttcgcaacgggctctacctctacttgcaagctagttttgccaagcacaatgacaaagctttaccatttgcaagtgcttgattttggttgctgcagagaTttagtgttctcctcgaaagaagatttgtgtagactcaacaacctgcggcactcaatcgctagcgatcaagagctggacatcccaaactttggcaggctgacatcactccagacgataccgttgctcacagtaaccaaggaagccgggtgcgagatacagcagctggcgcaactaaacaagcttcgaggcaggctgcagatcgagggtcttgaaaatgttgaaagcaaggaagcagctattggagcaaatcttgctgccaagaaaggcctccaagaattggtactggtatgggattggaatgatgagagctgcagcccggacgttcaagcagagctgctgaacctgaacaatggccccaagctcctgaaccaactgaaactcaacagatgcagcccattgggatctattcctcaacaaagcgagctgttcactgatctttgttcgctcgtgatttggtgttgcagctgggactccttaccagataacatggagcttctcaagtcactcgagaaactagagctatttctttgccctcaaatcttgctgcttccagtgctgcccctgtctcttaagacgtttcgactttatcgctgcagcgacgtgctcacgagttcgtgccaaacaattggttatgaaaactggcaaaagatcaagcacattccaaacaagcatttataa
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| Protein seq | MADPVTVSAAVGWGISAVGWVVSPIITNLINKGFSYLDLGRRGRSAKLNELENKVSELRRVLEAVEETPKSTGRSSAPPDVSRLALKRILDKIDNIINEAHRVLPPTNLPGYTRTDKKQIVSSSSRSAVTTATPPPVLIGRDKDRDDIIAMLHENVGDIQPGSGSIIGIHGIAGSGKSTLAQLVCASEKNDKKKADHFDLIIIWRAELRRHRFLLVLDDIWYDGQNQQELQKILTPLKAGKAGSKILATSRNMHALLALGAGRCANIDEQDRRIFEVIGVDIAKKLRKSPLAARTVGGQLRIRLNIDFWRDARDRDLLNETMGALWWSYQHLDEQVRRCFSYCSIFPRRHRLKRDELVTLWVAEGFIRTSDQGEEEAVGRQYFDELVSSSFLMKQTGGGPTNYFTVHDLLHDLAEKVAGSDCFRIEKGLQGVIPPGVHHLSIETFDKEMITEKISEMENLHSLIIHGSDIDMIADETLFESMFTRMRKLRVLRVKTFGFKQRKELPFPNSISNLKHLRYFGFATGSTSTCKLVLPSTMTKLYHLQVLDFGCCRDLVFSSKEDLCRLNNLRHSIASDQELDIPNFGRLTSLQTIPLLTVTKEAGCEIQQLAQLNKLRGRLQIEGLENVESKEAAIGANLAAKKGLQELVLVWDWNDESCSPDVQAELLNLNNGPKLLNQLKLNRCSPLGSIPQQSELFTDLCSLVIWCCSWDSLPDNMELLKSLEKLELFLCPQILLLPVLPLSLKTFRLYRCSDVLTSSCQTIGYENWQKIKHIPNKHL |
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| Function | Putative disease resistance protein RGA3 [UniProtKB/Swiss-Prot:Q7XA40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0023930 | OsPr106_11g0023930.01 | Chr11 | 30579793 | 30583811 | + | NAM | ||
| CDS seq | atggcagatccagtgactgtcagtgctgcagtaggctggggcatttctgctgtaggttgggtagtctcgcccatcatcaccaacctcatcaacAAaggcttctcctacctcgatcttggccgccgtggtcgatcagccaagctgaatgaacttgagaataaagtttcagagctacgacgagttcttgaagccgttgaggagactcctaagagtactggtaggtcaagtgcacctcctgatgtgtcaaggttggcgttgaagagaattctagataagatagataacattatcaatgaagcccacagagttttgcctcctacgaacttgccaggctacactaggactgacaagaaacaaattgtttcttccagttcacgcagtgcagtcactactgcgactcctccgcctgtcttaattggccGAgacaaggatcgtgacgacatcatagctatgcttcatgagaatgtaggtgacatacaaccaggatctggaagtataattggtattcatggcattgccgggtctgggaaatctacccttgcacaacttgtttgtgccagtgagaaaaatgacaagaagaaggctgatcatttcgatcttattataatctggagggcagaactgcgtaggcatcggttcttgctggtactagatgacatctggtacgacggtcagaatcagcaggagctacagaaaatattgactccattgaaggctgggaaggcaggaagcaagattctagcaactagtcgaaacatgcacgcactgttagctctgggtgcagggagatgtgcgaacatcgatgaacaagatcgaaggatatttgaagtgattggagttgacattgcaaaaaagctgaggaaatcacctctggcagccagaacagtaggaggacaactgcgtataagactgaatattgacttctggagggatgctcgtgatcgagaccttctgaatgagacaatgggagctctgtggtggagctaccAacatcttgatgagcaggttaggcgatgcttttcttactgcagcattttccctcgaagacatcggctgaaacgtgatgagttagttacactgtgggtggcagaagggtttattaggactagtgatcaaggagaggaggaagctgttggtcggcaatactttgacgaactagtatcgtcctcatttctgatgaagcaaactggaggtggtccaacgaattactttacagttcatgatctgctgcatgatttagcggagaaggtcgcaggaagtgattgctttagaattgagaaaggattgcaaggagttattcctccaggtgttcaccatctttctatcgagacttttgataaagaaatgattactgagaaaatttcggaaatggaaaatttacactctctgatcattcatgggagcgacatagacatgattgctgatgaaacactatttgaaagtatgttcacgaggatgaggaaattgcgggtactgagagtaaaaaccttcggattcaaacagagaaaggagttaccattcccaaactctatcagcaacttaaagcatctacgatattttggtttcgcaacgggctctacctctacttgcaagctagttttgccaagcacaatgacaaagctttaccatttgcaagtgcttgattttggttgctgcagagaTttagtgttctcctcgaaagaagatttgtgtagactcaacaacctgcggcactcaatcgctagcgatcaagagctggacatcccaaactttggcaggctgacatcactccagacgataccgttgctcacagtaaccaaggaagccgggtgcgagatacagcagctggcgcaactaaacaagcttcgaggcaggctgcagatcgagggtcttgaaaatgttgaaagcaaggaagcagctattggagcaaatcttgctgccaagaaaggcctccaagaattggtactggtatgggattggaatgatgagagctgcagcccggacgttcaagcagagctgctgaacctgaacaatggccccaagctcctgaaccaactgaaactcaacagatgcagcccattgggatctattcctcaacaaagcgagctgttcactgatctttgttcgctcgtgatttggtgttgcagctgggactccttaccagataacatggagcttctcaagtcactcgagaaactagagctatttctttgccctcaaatcttgctgcttccagtgctgcccctgtctcttaagacgtttcgactttatcgctgcagcgacgtgctcacgagttcgtgccaaacaattggttatgaaaactggcaaaagatcaagcacattccaaacaagcatttataa
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| Protein seq | MADPVTVSAAVGWGISAVGWVVSPIITNLINKGFSYLDLGRRGRSAKLNELENKVSELRRVLEAVEETPKSTGRSSAPPDVSRLALKRILDKIDNIINEAHRVLPPTNLPGYTRTDKKQIVSSSSRSAVTTATPPPVLIGRDKDRDDIIAMLHENVGDIQPGSGSIIGIHGIAGSGKSTLAQLVCASEKNDKKKADHFDLIIIWRAELRRHRFLLVLDDIWYDGQNQQELQKILTPLKAGKAGSKILATSRNMHALLALGAGRCANIDEQDRRIFEVIGVDIAKKLRKSPLAARTVGGQLRIRLNIDFWRDARDRDLLNETMGALWWSYQHLDEQVRRCFSYCSIFPRRHRLKRDELVTLWVAEGFIRTSDQGEEEAVGRQYFDELVSSSFLMKQTGGGPTNYFTVHDLLHDLAEKVAGSDCFRIEKGLQGVIPPGVHHLSIETFDKEMITEKISEMENLHSLIIHGSDIDMIADETLFESMFTRMRKLRVLRVKTFGFKQRKELPFPNSISNLKHLRYFGFATGSTSTCKLVLPSTMTKLYHLQVLDFGCCRDLVFSSKEDLCRLNNLRHSIASDQELDIPNFGRLTSLQTIPLLTVTKEAGCEIQQLAQLNKLRGRLQIEGLENVESKEAAIGANLAAKKGLQELVLVWDWNDESCSPDVQAELLNLNNGPKLLNQLKLNRCSPLGSIPQQSELFTDLCSLVIWCCSWDSLPDNMELLKSLEKLELFLCPQILLLPVLPLSLKTFRLYRCSDVLTSSCQTIGYENWQKIKHIPNKHL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0682501 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45600 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0682501 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023970 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023710 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023350 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023300 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0016920 | SBH | 0.381773 | 4.969097 | 2.042245 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0435800 | RBH | 0.137953 | 0.1331205 | 0.105315 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023620 | SBH | 0.393959 | 0.167419 | 0.935478 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0435600 | SBH | 0.2172335 | 0.077836 | 1.2482735 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024120 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024020 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022960 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022690 | SBH | 0.796213 | 0.0 | 0.076279 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023450 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023510 | RBH | 0.192076 | 0.563691 | 0.785586 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024040 | SBH | 0.0 | 0.0 | 0.0 |
