Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_10g0018250 | OGI:10063510 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr10:22918548-22927283 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gttaccaccaccaccacctgcaagcaaccaaccaaccaccacccgctcgctcgccgaccgccaccggcgacccaatcacccctcgccgccgccgccggagaaggaggaggagggagggagcagccggcagcggggagggggcgcgctgcgccgttgatgagatgaaggaggtggtgctccacgtgtacgacgtgacgaacagcgactcggagaagacgaacaacaccatcctccagatcaaccgcatcttcaaggaccggatcggcctcggcggcatcttccacagcgccgtccaggttcgcctccgcgcggcctcccagatccccctagtgaggggcgcatttgcttttgcttcgccttcgccttccttcctcctccagatctcgctgattttggttggttctctctcgcccttttttgttcggatctcggaggtgcgcaggtctatggcgaggaggagtggtcgttcgggttctgcgagaacggcagcggcgtcttcagctgccccatcgggaagaaccccatgtacacctaccgcgagtgcatcgtcctcggggagaccgagtgctccatcgccaccgtgaaccggatcctgcgggagctcagccgcgagtggccgggacactcctacgacctcctctccaggaactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggtaaggggattgggattcgcagctcccgctcttccgattagagagtagcaattgcccgtgcaatgtgtatgtgtgcccaagggataccaattctcaactctgtaatgcagagaaactatgcggcgttgtctaacattaacatcggtaggtatagtaacagcagatcctaatttatttagttcatgcaaaaTatgctgttggggaaatggaggagattgttacgaattggagattgtcggggagggatgggtgtacaacttggtggtactcgattagacagtagccaagaagttttactagagagtagcagttgtgctgaactcaaattcagggtgttttattttgttagagggctagtgagtagagctgcagcttagcaggagggatagcatttcttggaggtgctaattctcttggctgtatgttataacattagggacttgatttcagaactagatgaactgataaagaacaataataagctagggccgatgtgcctttatgtgaaatagatgagatttgctcacaagtcacaacttacttaaattaattgtttgtcttatccatgctaagtatggttgtattcctgctcagatttaaaatgacagataatagatttttgttaactgatcttgtgttaaaaactgtgcaggctgggttaatcgttttgccaatgctggtgataccgctgtggtagttgctgagaacacagcagttaaggtatgcttattttaacttttcttacttatgcatcagcaagtttttctcttgtacgttcattgttgtgtagcacacactcttgcctgttggtatgtttaagtttttgtgtgtgttgaactaaatatttcattacaatgcttagttttcattgagtggtgaattcattgtaatgctcattttagaacagcatttataatggcattaagcttcaacaaagcctatagattcgacttagttcatgtccatagcggctatcagtgtgtcatgcgcatcctaataaatccttttataattttttaataaacttcattgtagagaattatgagacgcctcacaacccaacgtgggagggcgattgtatttatatatccaatacaatagagattacaacaaactcttaaataagagttatatacggatacaatctatacaaatctaatctaactctaatacccgcccgtagtcaaagcgggaggaacatcacgaacgcaaagactggacctaaactcagtgaataactgaactggcaagcctttggtcatgatatctgcgaactgatgtgaggacggaacgtgtaaaacacgaacttgtcctaaagcaactttctgtcgaacaaaatgaatatcaatctcaatatgcttcgtccgacgatgatgaacaggattagcggtcatgtagacggcgctaacattatcacaataaacgatagtggccgaagcaagtggaatatgtagttcaagaagaagttgtcgaagccagcaacattcggcaacagcatgtgctactgcacggtactcagcttcagcactagatcgagagacagtggtctgtcgcttggaggaccatgagaccaagttttcaccaaggaaaacacaataccctgatgtggaacgacgagaatcaggacaacccgcctagtcagcatcagaataagctgtcaaagagtcaactggtgcagttccgatgtgaagaccaatgtgtagagtacccttgatgtaacgcaaaatccgtttaactagagcaagatgaggctcacggggatcatgcataaacaagcatacctgctgaactgcataagctatctcaggccgcgtgagagtaaggtactgaagagccccagctagactcctgtactcagtaggatctgaaacgggagctccatctgtagcagaaagtttacatcgagcatcaaccggtgttgcagtaggatgacaccgacataccagctcgccgcaataagtcaacagcatattgccgctgagaaagaaataaaccgtttgaagatcgagtgacagaaattcccaaaaagaagtgtaagtcaccaagatcagtcatagcaaactccgagtgttggcgagcagtaatatgctgaagaagtgaagtggacgaggcagtcagcaggatgtcatcaacatacaaaagtaaatatgcaacattatctccatctttataaatgaagagagaagtgtcagatgccgaagatgtgaaacccaactgacgaatatatgttgcAaaccgttggtaccaagcacgaggagcctgcttcaaaccatagagcggtttttggagcaaacatacagcagtaggcgcagaaggatcaacaaaaccagatggttgctgacaatacactgtctcctctagattgccatggagaaatgcgttcttgacatcaagctgatggataggccaagaccgagaggcagcaatactgagaacaacacgaatagtagcaggtttaacaactggactaaaagtctcatcgtagtcaatcccatgctgttgagaatagccacgaacaacccatcgtgccttgtgtcgagcaagagtcccatcggaatgaaacttatgtcgaaattttccggttacaacattagcaccaggaggtcgaggaaccaaacgccaagtgttgttatcaacaagagccttgtactcatcaGccatagctgcacgccagttagggtcagccaaagcactacgataattggaaggaactggcgaaacagaagtctgcatagcggtataattgaagcgctggacaggacgaagattgccggtctgagagcgagttaccatagcatgacgctgttgatcctgtgtatgttgtgcagctcgaaaagctctggtggtgcgtataggaccatgaaccgccacaggctgagtacgacgcacatacgtatggcgatatggagagatcagcggccgagcataagcaacaccatgcaaggcaggcggctgagcaatagaagaattcgatatagtttacactggtgatgaagaagacatgctcccgcccgtagtactagcatcggcaccagaggatgcactggaaggcgccaatatagctggttctggagcttgcgatgattgtagccttctattatggagaagaagccgatacatatcagggccgaccaagtcatccggcggctcgacctcaggagagggagcgaccagtagagaacacggacgctcgacgtccaaggaggacggagctaccgctttagaaacaccctgtagaagaaaatcaaaagaagaagcagtttggggaatagctgcaaacgggaatgtctgttcatcaaaaaccacatgatgagagatgaaaacacgacgggtagaaatgtccaaacaacgatagcccttgtgagaagccgggtaaccaagaaaaACacaggtagcggatcgaggagagagtttatgaggagtcgtggcactaagattaggataacagaggcaaccaaaaacccgaagattagaataatcaggaactttgtgatgcaggatttgaaacggaatggagtcgtggacggaagttgagggtcttcgattgagtaagtatgtggctgtggctagagcttcggcccagtaagaaggaggcatggatgcttgtatgagtagggtgcgaatggaattgttgattgtgcgaagcatgcgttcggctttgccgttttgaggagaagtgtaaggacaggataagcgaagcaaggttccacggctagcgagaaacgaggtagtggcttggttaacaaatttggtaccattatccgcctggaaacacttaatggaagagtcgaactgggtcgtaacataagcaacaaactcaacaatatgctggtgaacatcagacttatggcgaagaggaaaagtccagcagaagtgactaaaatcatccagcaccactaaataatacttaaagccaGaagtactcaagacaggagaggtccacacatcacagtgaacaagctcaaaagaagatgtactagactgagaccgagaaaaaggtagacgcgtgtgtttccctaactgacacgcatgacacaaactatgatctatcttagtataaggaagaatagctaatttgtggagagtctgaatagcagctgaactgggatgaccaagacgacgatgccacagggtagaggattgggccaggaagctgtgggcagcaatagcaggtgcagcagtaggtagagtgtagaggtcaccacgactattgcagcgaagaatcacacgccgggtacggaggtccttaacagaaaaaccaaactcatcaaactcaatggaacagttattgtcacgagtgaattgacgaacggaaagtagattgcgaaccaaagagggggcgacaaggatgtttttaagatcaaatttagtggttcctataggtagaaaagaagtgccacgacaaataacaggaatagtatgaccattgccaacggtaatgaaggtatgggaattgggaagacgagtaacgagaataccgtcggtagaggacatgtgtgaagtggctcctgtgtcaagcacccaaggacttggactttgcacgaacaactgattgagggcagcaatcagacctgcctgatcccaattgggctgagattgctgcattggtggcaagcccagcattggtggagagacatatgggcctgcaaatgtcgtgtgtgcttgaggatatgggccaagcagaccggcactgttgctgggacgccagagagactgctgctgctgcacagcccatggattgaaacagacccatgggccggtaggtcgtggcccagcctggtgctgctgctgctggaaattgttcccgaagttgccatagccgccgccattgctgttgttttgtcgtccgccattgccgccaccactgctgttggtcgctggttgcggcgaccaccgttgttggagccaccgccacgagactgtgatgaagaagaggacgcacaggtgccggaagtgcagtcattggcagaggaggcagccaccaccatggctgtctcagcctggaccttgtgtgcattggcaattcgcagctctttgagcaacaaggtgttgcgcgccaaggcgaaggagggcagaacaggggcgctggcgatgttgtcggcggtgctcgaaaaacgagagttgaggccgctcagcaagttgaggacaagctgagattcggtgacagggtggccgacgtcgcggagggcattggcagcagtcttcaccttctgacaataatcggcaatgggcatgtcaccttgcgtcattgagtggaactcgtgactgagatagatggcgcggggttccttgtttgcttgaaagagatcgtcgatggcgagccataggtcgcgggcggtctggtcgggttccatgacgacgccgaggatagcatcggaaacggagccgaacagccagccccgaacacaacaatcggcttgtgcccaagtcgagtcttcgggacgagggggtgcggtgccatcaatgtgaggaaggggcccaaacttgccacacatagaagtgaagaaggtcttccacttgttgaaattggggtgcttgagctccaggataattggtatgtgagtcttgacgttgacggtggcatacgggttgacgaagatcgagccggtagaatccctggtgctggcagcagaagatggagtagagccggatgatgtagatgccattgttctcgaggttgtggaagaggaggtggactcggtagacatggcagagaggcagaataatcacgacgcggcgaagacagaaggcggcgcagcgtgagcagggcagagcgcggcgcgggcagggcgcggcgtggcgcgatgggggcagagcgcggcgcggcgcgatgcaggcagggcgcggcgcggaatgagcgagggcgcggcgcggtgcgtcgtggcacggtggggacgcggaaggcgtggtggggctggggcgcggcgagatcgtgaggggaaatcgctggggcgcggcgcggtggtggggacgcggaagtcgcgtgggcagcggaagagaagcgaacgcggaaaaagcgaaggccagaggaagcggcgaattagggtagaaggaaaccggtatctgataccatgtagagaattatgagacgcctcacaacccaacgtggagggcgattgtatttatatatccaatacaatagagattacaacaaactcttaaataagagttatatacggatacaatctatacaaatctaatctaactctaatattcatgttcatagggaagatttctctttgttgattttgtaattgtgactatagtacatacagtatgtagttgagttattttattatgtggtgcacttgacttttctattcaactacttaatttaaagtctgcaccccatctctagattcctggctttaccacaaaaatagatttgaccatgtatgtcactcagaaactttgcttagtctatccttcaggaccttcaccagcaaatccagtgctggtctgattgttcatagattttcatttacatggcagcttggcttggtgagcacagcatgatctacttcgttagctctgttgttttgactcatttacatgatatacttctgtgttagcatattctctgtgaatacattaggtgttaatacatgataccactacgccatgaatccttgaaaattgccatgttatggacttaatccatgcattcaaacaatgtacgtgtagccatcatagtcactagctcatcagttgactgaccatttccctttctcacattgatcaatgagataatgcattgaaagtgaaacacctacttaagagaatctgcatgactataaatggcaacaaacttttcagccacctttcttgaagttgttgacagtatccctttagatgttatggtcatgtcatactgtcatgcccatctaagatactccagttatcttctgtaaatgctattttttccttttatagttacaagatgtccattactagataaatacctcaaaatggtctacttgtcactactgttgcatctatattctttttcttcatgactttcctcatgttggttactttccatattcatgttttagatcttgaggctttctacaatccttggggtgtataggtatctgtagtattaattggagggatagtatgactgaaatgagggatataccttgtgactaacattatgaagcatatatgtctcaagaaccctataaaaacccttagatcttatgctattttcatcaagatatagacagttgtacactcaatgccatttacgtttggacaacAacagttgcatgcattttttttgtttttgctaatgtgattatagaccattcctacaatatgaagtaggataaatgagcgattctgagcttgatcaccgtgttgcttatatgtagtgatatcacattcattatttctcctaacatgcttttttattgtgaaattctgttttgcagttcagacaggctaaaacagaaatagtcaatgccagtagagtagcatacagatttatggcaggcctggcatcgaaaaatcaaaacccacaaccagagtccccaagtaaccaaagcagaaatggcccaactttccaggggacttggttcaagaacatcatttcgaatggcgcaaagccttcctcaagcgaatcaacttcatcgcatgacactggtactggtggtgatgaatcctctttgcagaatcaaaaaccgtcggagcagtcaacacggttgtagccgctgccaccagttatcacctgttgaattgaatctgtagtgtaacagtagccagcatttgttaaaaatacatggcatgtttattcacgcatgaatctcttgtatctctgcgttgtcttgcaacgggaaacatgaaatgttaaaacacgtcatccaaagcttgacagttttgtggttcttttctgtcactcatgtggcggttttggttgatagcctgatagtttttgtggttctttacgttgatgagtttttagacccgctaatattggtgatttacagcaagctgaattcttgggagataggatgcaaaggacaacgag
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| CDS seq | atgaaggaggtggtgctccacgtgtacgacgtgacgaacagcgactcggagaagacgaacaacaccatcctccagatcaaccgcatcttcaaggaccggatcggcctcggcggcatcttccacagcgccgtccaggtctatggcgaggaggagtggtcgttcgggttctgcgagaacggcagcggcgtcttcagctgccccatcgggaagaaccccatgtacacctaccgcgagtgcatcgtcctcggggagaccgagtgctccatcgccaccgtgaaccggatcctgcgggagctcagccgcgagtggccgggacactcctacgacctcctctccaggaactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggctgggttaatcgttttgccaatgctggtgataccgctgtggtagttgctgagaacacagcagttaagttcagacaggctaaaacagaaatagtcaatgccagtagagtagcatacagatttatggcaggcctggcatcgaaaaatcaaaacccacaaccagagtccccaagtaaccaaagcagaaatggcccaactttccaggggacttggttcaagaacatcatttcgaatggcgcaaagccttcctcaagcgaatcaacttcatcgcatgacactggtactggtggtgatgaatcctctttgcagaatcaaaaaccgtcggagcagtcaacacggttgtag
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| Protein seq | MKEVVLHVYDVTNSDSEKTNNTILQINRIFKDRIGLGGIFHSAVQVYGEEEWSFGFCENGSGVFSCPIGKNPMYTYRECIVLGETECSIATVNRILRELSREWPGHSYDLLSRNCNHFCDVLCERLAVPKLPGWVNRFANAGDTAVVVAENTAVKFRQAKTEIVNASRVAYRFMAGLASKNQNPQPESPSNQSRNGPTFQGTWFKNIISNGAKPSSSESTSSHDTGTGGDESSLQNQKPSEQSTRL |
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| Function | Desumoylating isopeptidase 1 homolog [UniProtKB/Swiss-Prot:H2KZK4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_10g0018250 | OsPr106_10g0018250.01 | Chr10 | 22918548 | 22927283 | + | NAM | ||
| CDS seq | atgaaggaggtggtgctccacgtgtacgacgtgacgaacagcgactcggagaagacgaacaacaccatcctccagatcaaccgcatcttcaaggaccggatcggcctcggcggcatcttccacagcgccgtccaggtctatggcgaggaggagtggtcgttcgggttctgcgagaacggcagcggcgtcttcagctgccccatcgggaagaaccccatgtacacctaccgcgagtgcatcgtcctcggggagaccgagtgctccatcgccaccgtgaaccggatcctgcgggagctcagccgcgagtggccgggacactcctacgacctcctctccaggaactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggctgggttaatcgttttgccaatgctggtgataccgctgtggtagttgctgagaacacagcagttaagttcagacaggctaaaacagaaatagtcaatgccagtagagtagcatacagatttatggcaggcctggcatcgaaaaatcaaaacccacaaccagagtccccaagtaaccaaagcagaaatggcccaactttccaggggacttggttcaagaacatcatttcgaatggcgcaaagccttcctcaagcgaatcaacttcatcgcatgacactggtactggtggtgatgaatcctctttgcagaatcaaaaaccgtcggagcagtcaacacggttgtag
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| Protein seq | MKEVVLHVYDVTNSDSEKTNNTILQINRIFKDRIGLGGIFHSAVQVYGEEEWSFGFCENGSGVFSCPIGKNPMYTYRECIVLGETECSIATVNRILRELSREWPGHSYDLLSRNCNHFCDVLCERLAVPKLPGWVNRFANAGDTAVVVAENTAVKFRQAKTEIVNASRVAYRFMAGLASKNQNPQPESPSNQSRNGPTFQGTWFKNIISNGAKPSSSESTSSHDTGTGGDESSLQNQKPSEQSTRL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 7.908484 | 29.558342 | 25.382320 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0533900 | RBH | 1.506653 | 2.500321 | 4.495504 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38970 | RBH | 0.791476 | 1.356449 | 1.010259 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0533900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0018170 | RBH | 1.438168 | 18.629673 | 6.320736 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018570 | RBH | 0.352132 | 2.114498 | 4.045936 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017940 | RBH | 0.554995 | 8.948402 | 7.322462 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018510 | RBH | 0.110676 | 0.884529 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0342900 | RBH | 15.0958255 | 25.425099 | 27.396059 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0018150 | RBH | 1.051664 | 1.896323 | 1.685163 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0367600 | RBH | 17.813964 | 19.1281985 | 32.654118 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017910 | RBH | 0.686295 | 0.115475 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017740 | RBH | 0.314247 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018380 | RBH | 4.233116 | 42.586460 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017950 | RBH | 2.089229 | 0.0 | 2.690086 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018470 | RBH | 0.642986 | 9.973924 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G018150 | RBH | 0.670770 | 10.392816 | 4.275282 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018250 | RBH | 0.850569 | 2.860229 | 3.102250 |
