Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_10g0013940 OGI:10055130 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr10:19166602-19167203
Gene Symbol -
DNA seq

tcagacatcagaccacacaacctcgaattctcccacgctcgcgttgagcccaagcttcttccacaccgccggcgacccgccgacggcgttgttccggcacggcggcgcgaacccgtcctcctcgcggcacccgttcacggagtcgcactcgtccaccaccttggcgacgacggaccgtccggtcgccgcgccggcgaagacgcgtatcctccggttgcagcggcgcgcgccgccgaggcgcagccacccggaggacagcgcgaccaccagctgcgtgttccggtggaagagcatgtcgcaggacgtggggacgcctccgtcctcgccgtggtcgaacaccttcagcgtcaggatcgccggcgtcgtcctggccgacaccggcggcgagcacctgaaccgcgggtaccgctcgccggcgacgcagcagttatgggcgggctccccttggggcacctcgtctcgttgccgtggaggtagacgtagccgctggcatggcagctggccgctgcataatcagaggcgccatggatgatgggggaggtagagagcaagctcatggcctgcaagagagcaaacagaaacagtagccttgtgttatccat

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CDS seq

atggataacacaaggctactgtttctgtttgctctcttgcaggccatgagcttgctctctacctcccccatcatccatggcgcctctgattatgcagcggccagctgccatgccagcggctacgtctacctccacggcaacgagacgaggtgctcgccgccggtgtcggccaggacgacgccggcgatcctgacgctgaaggtgttcgaccacggcgaggacggaggcgtccccacgtcctgcgacatgctcttccaccggaacacgcagctggtggtcgcgctgtcctccgggtggctgcgcctcggcggcgcgcgccgctgcaaccggaggatacgcgtcttcgccggcgcggcgaccggacggtccgtcgtcgccaaggtggtggacgagtgcgactccgtgaacgggtgccgcgaggaggacgggttcgcgccgccgtgccggaacaacgccgtcggcgggtcgccggcggtgtggaagaagcttgggctcaacgcgagcgtgggagaattcgaggttgtgtggtctgatgtctga

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Protein seq

MDNTRLLFLFALLQAMSLLSTSPIIHGASDYAAASCHASGYVYLHGNETRCSPPVSARTTPAILTLKVFDHGEDGGVPTSCDMLFHRNTQLVVALSSGWLRLGGARRCNRRIRVFAGAATGRSVVAKVVDECDSVNGCREEDGFAPPCRNNAVGGSPAVWKKLGLNASVGEFEVVWSDV

Function Putative ripening-related protein 4 [UniProtKB/Swiss-Prot:Q9FWU1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_10g0013940 OsPr106_10g0013940.01 Chr10 19166602 19167203 - NAM
CDS seq

atggataacacaaggctactgtttctgtttgctctcttgcaggccatgagcttgctctctacctcccccatcatccatggcgcctctgattatgcagcggccagctgccatgccagcggctacgtctacctccacggcaacgagacgaggtgctcgccgccggtgtcggccaggacgacgccggcgatcctgacgctgaaggtgttcgaccacggcgaggacggaggcgtccccacgtcctgcgacatgctcttccaccggaacacgcagctggtggtcgcgctgtcctccgggtggctgcgcctcggcggcgcgcgccgctgcaaccggaggatacgcgtcttcgccggcgcggcgaccggacggtccgtcgtcgccaaggtggtggacgagtgcgactccgtgaacgggtgccgcgaggaggacgggttcgcgccgccgtgccggaacaacgccgtcggcgggtcgccggcggtgtggaagaagcttgggctcaacgcgagcgtgggagaattcgaggttgtgtggtctgatgtctga

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Protein seq

MDNTRLLFLFALLQAMSLLSTSPIIHGASDYAAASCHASGYVYLHGNETRCSPPVSARTTPAILTLKVFDHGEDGGVPTSCDMLFHRNTQLVVALSSGWLRLGGARRCNRRIRVFAGAATGRSVVAKVVDECDSVNGCREEDGFAPPCRNNAVGGSPAVWKKLGLNASVGEFEVVWSDV

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_10g0490666 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os10g34896 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os10g0490666 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_10g0015520 SBH 0.0 0.000000 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_10g0015770 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_10g0015200 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0015520 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_10g0013920 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0288400 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_10g0013960 RBH 0.0 0.0 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_10G0309700 SBH 0.012051 0.0038825 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_10g0015160 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0015060 SBH 0.083288 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_10g0013960 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_10g0013670 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_10g0014210 RBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_10G015330 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_10g0015390 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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