Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_10g0012530 | OGI:10051470 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr10:17825163-17835150 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCCCCCCTCCCAACCCCACCACCACCATCCGCCCCTTCCTCCGCGCCCCCTTTCAAATCCAACGCCTCGAGCTCTCGCCCCAACCGCGCGCCGCCCGAGGGCGCGCCCACCTCGCCGGCGGCGGCCACCAGGCCGCCGCCGTTCGCCATGGTCCCGGCGGTGTCTGAGGCCGTCCTCGCGGTGTTCGACGTCTCCACCACGCTCCGCTCGCAGGgggtacctcgccgggcaggagctgcccagcatcaccctccccgaggaccgcgccccggaggtgttcgagcggctgctcgggtccttcctcgcgcagtcgcatgggcccggcgtgctcccgccgcgccccatgcctcccctgctcggggacggcacccccgtggggctgctccgcctgtacctcgccgtcagggcgtgcggcgggttcgaggccgtgcgttcgtgggcggccgccgccgagatggccggcctcaaccccgccatggacgtccccatcatgctggtgtaccacaagtacctctgccccctggaggcgagcttcctcagggcccagaagctgagggaggaggccgggagcagcggcgggagcgccaagaagggcaagttcctcgcgccggcggccagggacgccgagggcgtcgaggaggtgctggacctgaagcgcaagagggagaacctcgtggggatgctcaactgggtgcgccaggtggccaagaagccagatcggcgtcgctccggcaggaacgccgccgacaaccacctctccatggcgttgatgttccgccgccagatgttcgtcgacgacggcttcagcgacaagccccatggctgcgcatcgcctgagcccgaggcaacagagcccgaggtaaacagctcactgcctcctacatctatttttcttgaaatgctgcttgattgataatttgatatgattgattgtgttattgttttgttaattacattggagatctagattagaatgatgtcgttgctcctactctgttgattataaatgctggtgcttagatttacctttcgggaagctaaatcttccatcacagagcattgctcgaggtgttggactgagggataccatggctaatgtgtaatgcttgatcatgtttgagcattcgtatgtttcctttttcttttccatatgccatgatgtttgctctatgtagttcgaggcataaggaaatgtgttgcaaaaaacttgattagggtagaacctggattttcggttgactgttggttggaacaatcgttctgttttgcctaattcttgccaacttttatctgttaaaacttttccttagtcaaattatttttgcgatcatctggcctttaatttttgaacttgaagctagttctgttcttgtagttacgagcctacgagcatctgcttgtgaggaaaaggaaaacacaaccttttccatttgtagtatggcaagttttgatactactttttctttaaaaaactttaatttagcatatggagttaggtatgccaaagtactataccacacttctatttctaagactagccgttttggggatcattggtgactagtaaatgaagttaagaaagtttgatgctaatacactgtttcatgagaaatttaaaagttctctattctctagaaagtgcccgtgggtgatgcctaacgccttggcctttttaaaattatctgatttgctattcacatgaatatgggtgatcttctttccatatttcagtaagcctactatgagtaacttgctgcctatggatatcctgcacatcacaacatagcatagtatgtattgttagttaaaacaatatatgTtttgctagtaatacatttaggggcaaagataacactcttttcgaaagaaacctaggcttttagggccaaaggttataggaaaaaaacatggacacactgctatgccaccatttttactagtataatctcacattggtgggctccactatctcattttatcctctcctctgcactctccttctccctctccctctcactctcttgatagtgacAaaaaaggtgaaggcacaaggcttcatgattgatgacattcaaggattggatagtgcattgccttaattgggtctactagaatactaatgaaatgtgtcccttatctaaaagagctctattgtcttcaccaatttgtcttctctcttgatcggatctagctatgttgtgttccttgcaatgaaacatccttctcaattgttgaccctgtcgtcacaattccttgagaaattgcaaaagctagagttttgctttaggatgtgtttggttgcaaggataggatgggatgggtcagggcaaacccacttttaggactgtttggtttaggggtgagtgggttgggtttgtccctggagaggaatattcctctcagatccgggaccaagctatccagcaaaatcggccggacgagctcgtctcacctggacagagcatacatcgtcagttcagattgagccgagtttaattgcaatcccacctttgcatccggcggcgctggttcgctcccaccacccgtccacgaccgctggcgctccgacacaaccacccgccaccacctccgcaatcgttggtgctcctccgcgactcactgccgccaccgctccttcgtgagcggccgacactcctctgcgacccgccgccgcctcctagagcggccggcgctccttcgtgactctccactgcctcctccacaagtggttggcactcgtccgcgacccgccactgcctcttctccgcaagcagttgacgctcctccgtggcccaccaacgcctcctccacgagtggccgccgtcgcctcgcctctcctccgcaaccggtcatccactcgtccacccgcctacctgttggtcgctgcagctcctttcgcttgctcgctcgaccgcttgtcgagtcaccaaccgctccgttcctccttcgcccactcatgaatctcctccttctgccttcttgctcgttcactcatcgagtcgtcggccgcaccgtccctcctcgcctgcttgctcgtcgagttgctggctgcgcccgcccacgccgatcctacctctggctgttggctcgtctgcgctcttcccaccaacgtggtgtcgggatcagacgtgggttgacggtagccacaaatggcgtccatcccatccctccctcatcctttctacgaaacaaataactggatggtcccatcctatgaaccaaacatgtgagtggaatcatcacatcctaaaaatcagggatggtcccatgccatcccacctagtcttagaaccaaacacatgcttacattacatagtaaaaccttgggttttgtgaaatttcttcctacaaattagtttctctgatagaaagcctcgaaacgaatgagatggaagcaaggaatgaccaaatgaagcataattctgccctagatatctcttccctacctgcacaactcccattcaaagcagtagttatgatatggtatccatcctatggtatatatcatattagaaacttgtttagagaaactttttatcggagtcactcaacattacttttcctgccaaatcattattacttgagttgaaggccaactacatcgactacgtcttacaactttttgacacattggatggcgtgatggcaatcaagcaatgttggacatcaaagagatagaatataacatgtgatgcttggatggccaatgtcactacaattggtcaaacttcgaacttattggcacactcttcattgaatatattgcctttggcatcaatgttggtgaatttgtggaagtaaacgaaaaggatcatgaattcgtgactcacaccttctgtgttttggttgcccatggagatgaccttgttgatgttagaccacggttaGgggctcctcttatttgctccatccatcaaagcttttgttaatcttgttccacatgacatggcgtttatattatacacttatatgaatgtgtgttcaccacccatatccatcacccttttagctagaatggcaagtagtgcaagtgtgcaaccaatatccatgattgaaggattctttgtgtaatgttttgaaaggcacctacttagcttgactaagtggtatctaggtactagttggcatcctcttgcctgagttacctagccgacgacagccgcatagcccccccacgattatgtgtaagtattggtctactgcttgactagtgctcaatgtcgtggcaaacactggatccctattatctacttccatgTttactagattgttaccattctgatctatctatataacttttatggaaatactagacggcattctccatttaagggatgatcctacacttGtagtttCttcacttgatttgtacccttctttgttaagccgttgccaatcggcttccatattcttgtacttaccagttatgaaatttcatgacatgattttcatgccattataggtgatgtgacaatcaagcagaaagaggtaaacaagaaactacattacaaaacttggaatcgcaattgtgatcttgacatgagaacaaggatgcgattttctttctgatgcaagaactttagtcaatgtctattttatgagactcggtctattgcacttgattccatggatgttttaccgaatcttgttgtttgaaattttggaatgaactgtttatggccgtaaattatgctaaaagtagttgtaggtggggaatagttattgtgccttctattctatggtataactattaccgagaatagaaaatgatgcatggaatggttattgtttcaagcaatgcactacaaaggcgatataattaagtagtgctatatgctagcgtttggttcgggacggggagaatgggacatgatcgtcccgcaacgagcccttgtcccttcttttggtttggagaaccaagtagaacaagctaggacagactcattccaccgtgcggaatgttctgcctagattcggaactatattgtcgaaaaaaattggccgaacgagatcatcccaacttgtctcgctcagtcacatggccacatctgatcaggaaccattggatcactaaggctgactttcgtctcttttcgacggttgagtcttgcagtcaagctcctttttgcctttgcactcaaggactttcatggcattgctttcccttagcattgtaattgaggggatacgaccattgccatggatatcgggccgttgtccttagtgttagctaacacgagatgggggacaagaagatgcatggtagtggcatggcaaaagcaaggagcaaaaacggtagatacaccagaaggttactagaactaatctaatcttattccatttcttcaatcaaacaccgaataaagctccggactatctcatcctttgaaccaaacaaatctagaaccatttcatttcgtcaattcgtcatgtcccatcctatAaaaaaaaggaccatctatctattccaccttattcccccaaccaaaacactatctaagattttaagtagctcttgttgtagttgatgcgaattgaatctcaaggagagattgatcgaagtcggatggcatgatctttcatgaacatacagactgtgataagtagttgccgagttgcaagatgcaaaccaagaaccaaggataactcgacgacaacagtcgcagtgagcagaagtagtcgacaaatgatgtggtagaagcaatgacaccatgctatgctacccatggtcatgattcacactattgaaggataccaatgcacattgttttcacattatcaaaatcataaagtctagcctagttgaccgatagttgaaaaagttggtccagttgtgctatgggattattcatgcatttagaccactttgaaggtaaatatagtgaaccgcaattgaatcgactggctgaataattggaatgttgaatggatgagccaagagctcgggtggatcacttgtctagattatactgataacacttttcatgttttgatataggtgatcccatgaacattaaccatgaccaaattgacgcaatcccttaatcttggattggactagtgtctgatacaagtaaatgttgcgtgttgcaacttggtgggtttattcatcttagttaattgatctaccgtgaaaatgactgctcattggtatgtctatcagcatggacgcacctagaaatgggccaaagccatggtcccaagcctagtttcttgatacatctgtgctacgatggtgaaaatttgcacacctcgatggacctttagtccctactcccatgccctggtccatggcctatgtggcctggggtttgggtttgcccttgcttgtgagggcttcttgattgcttgcccttattgatcaaacttgatcgagtaattgacctgaactagctctcttgccaccgatcaaccagtgattcatggttttatgtactagaatatagtagataaatagttgccaaaaagtcctatgctcctacatccactaccttatagctttctactttctgccaaacaacccgtgcatacatgcttagttggacccatgcctatttgtgagttgcacgtccatggtttgaatccaacaccctaagttttggccacttaatttgtgtcatgcatagattgaggtagatcaaatcatcgttttgcttaaacatcgctttgtctaatcttattttctttgattcatgttgacctaactatagagacggtaaaatgttgcaaagtgcataacctaggatttaggtttggttttttcaagtcgaatcgtcattccaagatatgattgatagcattgctctatctttcttgcacttctatgatttgggacttggtcgattcatgcacttcatactcctctgcataccataaagttgatatcttgttatgtttcgtatttgttaagaggaatgtttggcatttcatactactgatgtgattagtcttggtcaattagattaatttgggctgccaatcgtactgtcaatatcctttaagtggtacatccaaaactccctatgatatgttgtaccatcatttttaggtggtataaattcctcgtgaagtccatccttttgtgatatattaggtatgtagcctacaatatatgaaatcgctttgctcacatgtctttgtgttaacatgcttcttatcttggttggagtatgttgtttcttatttggttgtctatgaaaacattttgatactttgatcaattagtcacacgtttgagtgcctattggttgctcaatcggcatatggttggagatggtagtgttgaaaagttatactggattggcagtttaactaggaaaaagtggaatggttggttgcatccaaaaaccgttcatactttgtaaatttggatgtttttagctattcgaattgggtggtttttaggtgaactaggcattaaaaccgggatgagttggaccgggtggagggctgatgattttttgtagtgggccaaaccgaggtccaattccttccatcaaggcttgtatcatcatttcttctttttgcaaagctcctaaaaaggggcgctaggtggggactcgacctcgggtttccatggtgtaggcaacctagaaaggaacatgcatcctagatgattattttgatattgtagttcgatcgctcggttgaacagtcaaaccacttgaacatcgcttagctagttcactttctagttcaattgattatactgcgggtgcctatgagtgaacactctaaggagcaccgaacacctataaatgtgttttgtgttgattgacgtgatgttttagaaatgagttgctaggagttacttataggattgtagctaatgtacaaaaggctacaatacttttatgtgcactagataagcaaggaaaatcatccatagggtggatgacaagcaagtcttgcctttgccctgggttgttgaggtcatcaaccactatgttttgctataggccaattagaccaatgcccatgtgtcgggttaaggacttgcccctcttgagggtagccttgttcgtcccttgcctcagccatagagcacatggagtctaacccatgccaatactaagggagtgagggtgtaccacctagaaaccatgagctgcttataggggaaccttagaataaagggttccatcaacatgctacaacctttgagaaagaaccaaaacactggccacatacttgagtgtagcaaatagtggcaatgaaacttgaaccagacagataactgatgcataccatctagaagatccattccatgtttgattcttttccctaactatagtgggtatgtaaataaagagtcctcgacttatttaaacataactacaattgctagagacaaggtgatgcttgtaatattcaatagaccagtaacaatgcaaaactgcagcctgtccagttttttttttttctttaaatggtaataccatctacttaaaacactacgatatttcttgtcactgttgtaataccattaatgcaagactttccatgcatatggtgtagtgtaattaattgcttactagctatgccgtgtaaacctgattatcgtaaggatgaggtaaaattgcatattcctcatctcagaatgcatgtatagtgtagtccatgcctatccgtaagaccgtaagatggcaaaacctagttggcttgctactgttttacttggcaagatgcaagtagagtatgttctggaatgatcctaagtttaggctatatttgtacttaccataagattgagccagcacaaaccacacctggcaatacctttcttcagattttgtattctgtgtggaattgtggattgtgcatttatatttcttcagggatacgccatgcttatccactttgtaatcacgaactggttgctacatattagcttattattggtttacagaccatacaaatacaatcattgtagaactcaaaactgcttggcatgcatgctgaactatggcctattattaattgacaattccttcctaagatataaaataaaattgagaaggatcactttttgttcctgcagagtggtcttacaactgaggatggacagtatgatggatgggatgatcaacaatctgcaggtgggagcagtaactggaattctcgtgcaaatcgctcttttggtctggcagatattccagaatggactgggaagccttcattaccttatgaagatccagatatgctgagatttcttggagagcctattttaactccaaaaaacaatgaggtctttgatgatactattggtaagggcaggccagacaagtgcaactgtgaagtcccaggttccacttcttgtgtcagatttcatgtggcagagaaaaagaccgagctgaagcgtgaaatgggctcatcatactatgcaatgaagtttgatgaaattggacaggatgcagcattaacatggcaaaaggatgaagaaaagaagtttgagaccattgtccagcagaatctgccttcatctaagtacaatttctgggtcaagctgcgcgccgccttccgttacaaaggtgaacgtgcccttgtgagttactacaacaatgttttccagccgcgcagaagagccttccagaatcgagtagctcaacatgctaatggtgtagatagtgatgatgactcaattgaacctgccttcctacgccttcgtcaagacggtggtaagagtagatccaggtcttctgcttcctctaggaaccaaaatcagtcttagggtgatagtcttctataagtaactggtggctCCAGttcagcttcacctggagctcaagactcaaaaggttcatttatttttatcttcaccaattggttactggactggagacggtaagtgagcttcaattgggaatctcactgagacttggtggtggtttttgtgaatacctctgtgtggcgcgttgcccgtttaccttaaaatctcaatgcaactgtgttgatatttagactatcttaaaaggttgttttacca
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| CDS seq | ATGGCCCCCCTCCCAACCCCACCACCACCATCCGCCCCTTCCTCCGCGCCCCCTTTCAAATCCAACGCCTCGAGCTCTCGCCCCAACCGCGCGCCGCCCGAGGGCGCGCCCACCTCGCCGGCGGCGGCCACCAGGCCGCCGCCGTTCGCCATGGTCCCGGCGGTGTCTGAGGCCGTCCTCGCGGTGTTCGACGTCTCCACCACGCTCCGCTCGCAGGgggagctgcccagcatcaccctccccgaggaccgcgccccggaggtgttcgagcggctgctcgggtccttcctcgcgcagtcgcatgggcccggcgtgctcccgccgcgccccatgcctcccctgctcggggacggcacccccgtggggctgctccgcctgtacctcgccgtcagggcgtgcggcgggttcgaggccgtgcgttcgtgggcggccgccgccgagatggccggcctcaaccccgccatggacgtccccatcatgctggtgtaccacaagtacctctgccccctggaggcgagcttcctcagggcccagaagctgagggaggaggccgggagcagcggcgggagcgccaagaagggcaagttcctcgcgccggcggccagggacgccgagggcgtcgaggaggtgctggacctgaagcgcaagagggagaacctcgtggggatgctcaactgggtgcgccaggtggccaagaagccagatcggcgtcgctccggcaggaacgccgccgacaaccacctctccatggcgttgatgttccgccgccagatgttcgtcgacgacggcttcagcgacaagccccatggctgcgcatcgcctgagcccgaggcaacagagcccgagagtggtcttacaactgaggatggacagtatgatggatgggatgatcaacaatctgcaggtgggagcagtaactggaattctcgtgcaaatcgctcttttggtctggcagatattccagaatggactgggaagccttcattaccttatgaagatccagatatgctgagatttcttggagagcctattttaactccaaaaaacaatgaggtctttgatgatactattggtaagggcaggccagacaagtgcaactgtgaagtcccaggttccacttcttgtgtcagatttcatgtggcagagaaaaagaccgagctgaagcgtgaaatgggctcatcatactatgcaatgaagtttgatgaaattggacaggatgcagcattaacatggcaaaaggatgaagaaaagaagtttgagaccattgtccagcagaatctgccttcatctaagtacaatttctgggtcaagctgcgcgccgccttccgttacaaaggtgaacgtgcccttgtgagttactacaacaatgttttccagccgcgcagaagagccttccagaatcgagtagctcaacatgctaatggtgtagatagtgatgatgactcaattgaacctgccttcctacgccttcgtcaagacggtggtaagagtagatccaggtcttctgcttcctctaggaaccaaaatcagtcttag
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| Protein seq | MAPLPTPPPPSAPSSAPPFKSNASSSRPNRAPPEGAPTSPAAATRPPPFAMVPAVSEAVLAVFDVSTTLRSQGELPSITLPEDRAPEVFERLLGSFLAQSHGPGVLPPRPMPPLLGDGTPVGLLRLYLAVRACGGFEAVRSWAAAAEMAGLNPAMDVPIMLVYHKYLCPLEASFLRAQKLREEAGSSGGSAKKGKFLAPAARDAEGVEEVLDLKRKRENLVGMLNWVRQVAKKPDRRRSGRNAADNHLSMALMFRRQMFVDDGFSDKPHGCASPEPEATEPESGLTTEDGQYDGWDDQQSAGGSSNWNSRANRSFGLADIPEWTGKPSLPYEDPDMLRFLGEPILTPKNNEVFDDTIGKGRPDKCNCEVPGSTSCVRFHVAEKKTELKREMGSSYYAMKFDEIGQDAALTWQKDEEKKFETIVQQNLPSSKYNFWVKLRAAFRYKGERALVSYYNNVFQPRRRAFQNRVAQHANGVDSDDDSIEPAFLRLRQDGGKSRSRSSASSRNQNQS |
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| Function | AT-rich interactive domain-containing protein 2 [UniProtKB/Swiss-Prot:Q9LDD4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_10g0012530 | OsPr106_10g0012530.01 | Chr10 | 17825163 | 17835150 | + | NAM | ||
| CDS seq | ATGGCCCCCCTCCCAACCCCACCACCACCATCCGCCCCTTCCTCCGCGCCCCCTTTCAAATCCAACGCCTCGAGCTCTCGCCCCAACCGCGCGCCGCCCGAGGGCGCGCCCACCTCGCCGGCGGCGGCCACCAGGCCGCCGCCGTTCGCCATGGTCCCGGCGGTGTCTGAGGCCGTCCTCGCGGTGTTCGACGTCTCCACCACGCTCCGCTCGCAGGgggagctgcccagcatcaccctccccgaggaccgcgccccggaggtgttcgagcggctgctcgggtccttcctcgcgcagtcgcatgggcccggcgtgctcccgccgcgccccatgcctcccctgctcggggacggcacccccgtggggctgctccgcctgtacctcgccgtcagggcgtgcggcgggttcgaggccgtgcgttcgtgggcggccgccgccgagatggccggcctcaaccccgccatggacgtccccatcatgctggtgtaccacaagtacctctgccccctggaggcgagcttcctcagggcccagaagctgagggaggaggccgggagcagcggcgggagcgccaagaagggcaagttcctcgcgccggcggccagggacgccgagggcgtcgaggaggtgctggacctgaagcgcaagagggagaacctcgtggggatgctcaactgggtgcgccaggtggccaagaagccagatcggcgtcgctccggcaggaacgccgccgacaaccacctctccatggcgttgatgttccgccgccagatgttcgtcgacgacggcttcagcgacaagccccatggctgcgcatcgcctgagcccgaggcaacagagcccgagagtggtcttacaactgaggatggacagtatgatggatgggatgatcaacaatctgcaggtgggagcagtaactggaattctcgtgcaaatcgctcttttggtctggcagatattccagaatggactgggaagccttcattaccttatgaagatccagatatgctgagatttcttggagagcctattttaactccaaaaaacaatgaggtctttgatgatactattggtaagggcaggccagacaagtgcaactgtgaagtcccaggttccacttcttgtgtcagatttcatgtggcagagaaaaagaccgagctgaagcgtgaaatgggctcatcatactatgcaatgaagtttgatgaaattggacaggatgcagcattaacatggcaaaaggatgaagaaaagaagtttgagaccattgtccagcagaatctgccttcatctaagtacaatttctgggtcaagctgcgcgccgccttccgttacaaaggtgaacgtgcccttgtgagttactacaacaatgttttccagccgcgcagaagagccttccagaatcgagtagctcaacatgctaatggtgtagatagtgatgatgactcaattgaacctgccttcctacgccttcgtcaagacggtggtaagagtagatccaggtcttctgcttcctctaggaaccaaaatcagtcttag
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| Protein seq | MAPLPTPPPPSAPSSAPPFKSNASSSRPNRAPPEGAPTSPAAATRPPPFAMVPAVSEAVLAVFDVSTTLRSQGELPSITLPEDRAPEVFERLLGSFLAQSHGPGVLPPRPMPPLLGDGTPVGLLRLYLAVRACGGFEAVRSWAAAAEMAGLNPAMDVPIMLVYHKYLCPLEASFLRAQKLREEAGSSGGSAKKGKFLAPAARDAEGVEEVLDLKRKRENLVGMLNWVRQVAKKPDRRRSGRNAADNHLSMALMFRRQMFVDDGFSDKPHGCASPEPEATEPESGLTTEDGQYDGWDDQQSAGGSSNWNSRANRSFGLADIPEWTGKPSLPYEDPDMLRFLGEPILTPKNNEVFDDTIGKGRPDKCNCEVPGSTSCVRFHVAEKKTELKREMGSSYYAMKFDEIGQDAALTWQKDEEKKFETIVQQNLPSSKYNFWVKLRAAFRYKGERALVSYYNNVFQPRRRAFQNRVAQHANGVDSDDDSIEPAFLRLRQDGGKSRSRSSASSRNQNQS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_10g0012530 | OsPr106_10g0012530.02 | Chr10 | 17825194 | 17835148 | + | IsoSeq | ||
| CDS seq | CGCCCCTTCCTCCGCGCCCCCTTTCAAATCCAACGCCTCGAGCTCTCGCCGCCGTTCGCCATGGTCCCGGCGGTGTCTGAGGCCGTCCTCGCGGTGTTCGACGTCTCCACCACGCTCCGCTCGCAGGgggtacctcgccgggcaggagctgcccagcatcaccctccccgaggaccgcgccccggaggtgttcgagcggctgctcgggtccttcctcgcgcagtcgcatgggcccggcgtgctcccgccgcgccccatgcctcccctgctcggggacggcacccccgtggggctgctccgcctgtacctcgccgtcagggcgtgcggcgggttcgaggccgtgcgttcgtgggcggccgccgccgagatggccggcctcaaccccgccatggacgtccccatcatgctggtgtaccacaagtacctctgccccctggaggcgagcttcctcagggcccagaagctgagggaggaggccgggagcagcggcgggagcgccaagaagggcaagttcctcgcgccggcggccagggacgccgagggcgtcgaggaggtgctggacctgaagcgcaagagggagaacctcgtggggatgctcaactgggtgcgccaggtggccaagaagccagatcggcgtcgctccggcaggaacgccgccgacaaccacctctccatggcgttgatgttccgccgccagatgttcgtcgacgacggcttcagcgacaagccccatggctgcgcatc
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| Protein seq | RPFLRAPFQIQRLELSPPFAMVPAVSEAVLAVFDVSTTLRSQGVPRRAGAAQHHPPRGPRPGGVRAAARVLPRAVAWARRAPAAPHASPARGRHPRGAAPPVPRRQGVRRVRGRAFVGGRRRDGRPQPRHGRPHHAGVPQVPLPPGGELPQGPEAEGGGREQRRERQEGQVPRAGGQGRRGRRGGAGPEAQEGEPRGDAQLGAPGGQEARSASLRQERRRQPPLHGVDVPPPDVRRRRLQRQAPWLRI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.636901 | 5.307168 | 2.209743 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0446400 | RBH | 1.532405 | 0.855588 | 2.232748 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g30944 | RBH | 0.756460 | 0.265276 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0446400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0012620 | RBH | 0.098791 | 4.084777 | 1.972255 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0012820 | RBH | 0.000000 | 1.202917 | 0.535304 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0012520 | RBH | 1.851182 | 7.096938 | 1.091319 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0012780 | RBH | 0.077001 | 0.101468 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0267900 | RBH | 2.640742 | 2.624943 | 1.580695 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0012560 | RBH | 0.038550 | 0.333640 | 0.111089 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0288500 | RBH | 3.0996565 | 3.4348475 | 11.0021075 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0012300 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0012280 | RBH | 0.189391 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0012690 | RBH | 0.000000 | 10.240809 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0012300 | RBH | 0.107645 | 0.0 | 0.083353 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0012800 | RBH | 0.073653 | 1.730094 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G012640 | RBH | 0.220202 | 0.0 | 0.633696 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0012580 | RBH | 0.000000 | 4.223351 | 1.485571 |
