Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_09g0010170 | OGI:09043350 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr09:16038307-16039881 | ||||||||
| Gene Symbol | NAC108, ONAC108 | ||||||||||
| DNA seq | tttatttaactctctatataagtaagatgtacatagcaaaaacacacaaccacacactagtttttataatctaagaaagtaaaagaaatgctaagagcgcctgaaatagaggcgtgtataaaatacgcaaacacaaaacgtatattacatgaatgactacagtacaaatatatatacagatacgtgcaagtttaattacagagaggggacatattaagtagctagtgatctgaagaagtagacatggatgatgcatatgcatctaatgatcaaattatggccttcatatatatctcgattgatcgatctagctagctagctagctagctgcatcatccttcagaTttttttttggagaatacgcaaaagacttatgtatcttttgtattaagagaagtaaccagatcatactttagattttagaacatgccattgctcgttggatcaaaggtccagcgagaagctctcgtagtcgagaagctctggcagatcaaaagccgaagaacagttcatcatcagcaactcctcctcgtcgtggccatggaggatcatgtcgtctcctatgttgaaatggtcgcttggcgccatggactcattagcaccggagaagaagctgcagctcgcatggcctgcgccgtccacagagttcgccggcgccggcgacgaacggagatgagcgtcgtcggagggaagatgatgttctgtagttcccctatcgttgttaccatctggtgtcttcctgacgaacaccctgcaaatcacccactcactctaacaaaaacaacagaattcagcagaaaattcgatccaatttagtgaaaacgtttacaaattcagtcgcacaagacattcgaactgttgcatttcactcacgcgggcgacaactgtcgtcggcgtcggggaagaagaggcggtggcggcggcgccgccgtgcaggaggcggtactcgtgcatgacccagctcgtcttctcgcccctcggcgccctccccctgtagaacacgagcgtcttcttcacccccacggggcggccgccgccgccgccgccgccgtgcagcaccgccttgtccttccccgtcgacttccagtacccggccgccgtggccctgttcgtcctcgttcccgacggccacctgaagctcctcgtgcagaagaagtagccgcaccgctcctcctcctcctcctcctcctccgccgccgcatcacctgcacacatcgacgacgacgacgacgacacatcgatcaaagccaacgcacacacgcagcaatgtctcgtcgcaatcgatcgactaacaacgcggcggcggcaggaggtcccagggctcggcgcggtacaggtcggcgtcgcggatggcggcggaggtgaagccggcgtcggccgccttccgggcgaggtagtgggcgacgagctccccgtcggtcggccggaaccggaagcccggaggcaggagtcgcgagatcatcgccgtcgacgacgacgacggcgcgcggtcgccgcctccgcctcctgccatcgtgacaccgccgcgcgcgctcatgcatgcagaatgcgcgcgagcaattaccactctaccag
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| CDS seq | atgagcgcgcgcggcggtgtcacgatggcaggaggcggaggcggcgaccgcgcgccgtcgtcgtcgtcgacggcgatgatctcgcgactcctgcctccgggcttccggttccggccgaccgacggggagctcgtcgcccactacctcgcccggaaggcggccgacgccggcttcacctccgccgccatccgcgacgccgacctgtaccgcgccgagccctgggacctcctgccgccgccgcgttgtgatgcggcggcggaggaggaggaggaggaggaggagcggtgcggctacttcttctgcacgaggagcttcaggtggccgtcgggaacgaggacgaacagggccacggcggccgggtactggaagtcgacggggaaggacaaggcggtgctgcacggcggcggcggcggcggcggccgccccgtgggggtgaagaagacgctcgtgttctacagggggagggcgccgaggggcgagaagacgagctgggtcatgcacgagtaccgcctcctgcacggcggcgccgccgccaccgcctcttcttccccgacgccgacgacagttgtcgcccgcagtgagtgggtgatttgcagggtgttcgtcaggaagacaccagatggtaacaacgataggggaactacagaacatcatcttccctccgacgacgctcatctccgttcgtcgccggcgccggcgaactctgtggacggcgcaggccatgcgagctgcagcttcttctccggtgctaatgagtccatggcgccaagcgaccatttcaacataggagacgacatgatcctccatggccacgacgaggaggagttgctgatgatgaactgttcttcggcttttgatctgccagagcttctcgactacgagagcttctcgctggacctttga
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| Protein seq | MSARGGVTMAGGGGGDRAPSSSSTAMISRLLPPGFRFRPTDGELVAHYLARKAADAGFTSAAIRDADLYRAEPWDLLPPPRCDAAAEEEEEEEERCGYFFCTRSFRWPSGTRTNRATAAGYWKSTGKDKAVLHGGGGGGGRPVGVKKTLVFYRGRAPRGEKTSWVMHEYRLLHGGAAATASSSPTPTTVVARSEWVICRVFVRKTPDGNNDRGTTEHHLPSDDAHLRSSPAPANSVDGAGHASCSFFSGANESMAPSDHFNIGDDMILHGHDEEELLMMNCSSAFDLPELLDYESFSLDL |
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| Function | NAC domain-containing protein 46 [UniProtKB/Swiss-Prot:Q9SQQ6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_09g0010170 | OsPr106_09g0010170.01 | Chr09 | 16038307 | 16039881 | - | NAM | ||
| CDS seq | atgagcgcgcgcggcggtgtcacgatggcaggaggcggaggcggcgaccgcgcgccgtcgtcgtcgtcgacggcgatgatctcgcgactcctgcctccgggcttccggttccggccgaccgacggggagctcgtcgcccactacctcgcccggaaggcggccgacgccggcttcacctccgccgccatccgcgacgccgacctgtaccgcgccgagccctgggacctcctgccgccgccgcgttgtgatgcggcggcggaggaggaggaggaggaggaggagcggtgcggctacttcttctgcacgaggagcttcaggtggccgtcgggaacgaggacgaacagggccacggcggccgggtactggaagtcgacggggaaggacaaggcggtgctgcacggcggcggcggcggcggcggccgccccgtgggggtgaagaagacgctcgtgttctacagggggagggcgccgaggggcgagaagacgagctgggtcatgcacgagtaccgcctcctgcacggcggcgccgccgccaccgcctcttcttccccgacgccgacgacagttgtcgcccgcagtgagtgggtgatttgcagggtgttcgtcaggaagacaccagatggtaacaacgataggggaactacagaacatcatcttccctccgacgacgctcatctccgttcgtcgccggcgccggcgaactctgtggacggcgcaggccatgcgagctgcagcttcttctccggtgctaatgagtccatggcgccaagcgaccatttcaacataggagacgacatgatcctccatggccacgacgaggaggagttgctgatgatgaactgttcttcggcttttgatctgccagagcttctcgactacgagagcttctcgctggacctttga
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| Protein seq | MSARGGVTMAGGGGGDRAPSSSSTAMISRLLPPGFRFRPTDGELVAHYLARKAADAGFTSAAIRDADLYRAEPWDLLPPPRCDAAAEEEEEEEERCGYFFCTRSFRWPSGTRTNRATAAGYWKSTGKDKAVLHGGGGGGGRPVGVKKTLVFYRGRAPRGEKTSWVMHEYRLLHGGAAATASSSPTPTTVVARSEWVICRVFVRKTPDGNNDRGTTEHHLPSDDAHLRSSPAPANSVDGAGHASCSFFSGANESMAPSDHFNIGDDMILHGHDEEELLMMNCSSAFDLPELLDYESFSLDL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0411900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g24560 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0411900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0010050 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0010000 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0010300 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0010060 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0017120 | RBH | 0.0 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0246300 | RBH | 0 | 0 | 0.0715915 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0010140 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0232300 | RBH | 0.0084565 | 0 | 0.202879 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0010130 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0009920 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0010050 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0009870 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0009920 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G010400 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0010200 | RBH | 0.0 | 0.0 | 0.0 |
