Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_09g0007310 | OGI:09034320 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr09:12373130-12375753 | ||||||||
| Gene Symbol | D305, OsD305, RLCK268, OsRLCK268 | ||||||||||
| DNA seq | atgacaaataatttctcagtgtgcattggtgaaggagggtatgggcctgtcttccatggacgactaaaagaaggtactcaggttgctgtcaagatgcattctccaacatcaacaatagggaaaggaatgacagagttcttagctgaggtattcatcaatttcagcccacacaactaacatgaatgcaatatataggtgtgttttttccatggtgccatcataaatgttttttgtttgagtgaattttgttttcatcatcccaaaaagtgcatttcttttgtaccactactattcatccgtacattttattttagccattgacatcttttatcagttaaatcacactatcaggcaatgtttataaaacattaaaaagttccactgtctcccggtaggtaatggcagtggtaaaaccaaaaccccattgacggacaatagtagcaaaacaaaaatgcacattttgagatggcgaaataagtacataacggcagaaacagggactttctcttcgttgtttacctcaccctcatagatatagtctctttgcaaatatcctcgaccccaaatggcatgcatcaatgttatttctgattgttttcattagctttcaaacagcttaaatgtttcaagtacttgttttgacaaattcaataattaggaaagtttggtaattgtaatacattatttggctgaaagtttccatgcacatatgtgctgcattacaattaagtactaaatcatccatagtacgacaagttgttttttggatgttgaaaagatctaacaataggaattccggtggtttataaattattgcataaaatatacccagtcaattgctagaaaattaagggacaaaaattaactccatcgcttcaaacaacaagatatctttgacctggctttacaactgaagaaagcatttagtaacatcctcaaattcttaatatgttttactatcttactttgtaggttgagagcttaacaactgtgcaccataggtatcttgtttttctggttggctactgcagtaacaagaatcatttagctcttatttatgagtatatgccaaacggaagcctttatgatcatatacgaggtttgtgatatgcaaacttcatgttggctttattatgctgtatcattcctgtagaactataagaatgccttattcaatattgtaatatgtcagggatttatatattgtcaattgattacatcttgtaaacatccaggactacataaaaaagagtttccaaatatggacagtatttcatagggcatacctatagatatgagtattaaattgcaactaatatattttcccattcataaattatgaaggatatacaaatttggaatgataccaattgtttgcataactaagttagtaatagcagacacaaacggtattagaacacccgttaacattattatgaacggaaagactaaggtgaaaccatgaaagtttatgtcatgtgttaggagctgtaagtaactaagtgtgttccgttagtgtataatatgtgtactcaacggatcttttaaaacaataaattgtgtgatttcagaactatcagtagagagtaaattctgatatgaaggggtaactagttctgccatagttcataggtgtatcataaacaagcttgctgatgctcaacttggacttgcgtgacataatcttactaactttttagtggtcatttaggcaaaaatgcaattgtccaaacattgcgatggcatgatcgagcacatattgcacttgaagctgcacaaggttagttttgagagaatatattttgttaaatatgcaagctaatacactgaacatgcaattttctacgtaggtttggactacttgcatacaggctgtatgctaccaataatacacagagacctgaagtcacagaacattctactcgggcatgacatggttgcgaagatctcagattttggattatccaggtcttatctcaatgatgcacaaagtcacatatctgtgacagctgctggaactctaggctacatcgatccagagtttgttcctatacctactttatccaataatcacctataaattagtattaggaagtgaaaaaactaactttcactaaatacgcactgttgcattggttcatcctgaattggttacaaaataaacttgaaagtttgataagaaaaccaatattggcatatactaattgcgtgtttggtacaaactgtgtttatacaggtactgtcttagcggtaggctcactataagtagtgatgtcttcagcttcggagtggttttgcttgagattgtaacaggcgaacctccaatcatatcaaccaccgtccacattgtacaacgtgtaaaggagaaggttgctatgggcaatatcgaggcaattattgacccacgatttggtggcgactacgatcccaattcagtctggaaggctgtggacatagcactgttgtgcacgaaggaagcatctcatgaaaggccaacaatgagtacagtagtggcagagctaaaggttgcattggcattggaaaatgctcgtgcaagtggtagcattagtgacattagtcaaggaggtgccaatttcgagctatcactgctgtcagcaagataa
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| CDS seq | atgacaaataatttctcagtgtgcattggtgaaggagggtatgggcctgtcttccatggacgactaaaagaaggtactcaggttgctgtcaagatgcattctccaacatcaacaatagggaaaggaatgacagagttcttagctgaggttgagagcttaacaactgtgcaccataggtatcttgtttttctggttggctactgcagtaacaagaatcatttagctcttatttatgagtatatgccaaacggaagcctttatgatcatatacgaggcaaaaatgcaattgtccaaacattgcgatggcatgatcgagcacatattgcacttgaagctgcacaaggcgaacctccaatcatatcaaccaccgtccacattgtacaacgtgtaaaggagaaggttgctatgggcaatatcgaggcaattattgacccacgatttggtggcgactacgatcccaattcagtctggaaggctgtggacatagcactgttgtgcacgaaggaagcatctcatgaaaggccaacaatgagtacagtagtggcagagctaaaggttgcattggcattggaaaatgctcgtgcaagtggtagcattagtgacattagtcaaggaggtgccaatttcgagctatcactgctgtcagcaagataa
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| Protein seq | MTNNFSVCIGEGGYGPVFHGRLKEGTQVAVKMHSPTSTIGKGMTEFLAEVESLTTVHHRYLVFLVGYCSNKNHLALIYEYMPNGSLYDHIRGKNAIVQTLRWHDRAHIALEAAQGEPPIISTTVHIVQRVKEKVAMGNIEAIIDPRFGGDYDPNSVWKAVDIALLCTKEASHERPTMSTVVAELKVALALENARASGSISDISQGGANFELSLLSAR |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At5g16900 [UniProtKB/Swiss-Prot:C0LGT5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_09g0007310 | OsPr106_09g0007310.01 | Chr09 | 12373130 | 12375753 | + | NAM | ||
| CDS seq | atgacaaataatttctcagtgtgcattggtgaaggagggtatgggcctgtcttccatggacgactaaaagaaggtactcaggttgctgtcaagatgcattctccaacatcaacaatagggaaaggaatgacagagttcttagctgaggttgagagcttaacaactgtgcaccataggtatcttgtttttctggttggctactgcagtaacaagaatcatttagctcttatttatgagtatatgccaaacggaagcctttatgatcatatacgaggcaaaaatgcaattgtccaaacattgcgatggcatgatcgagcacatattgcacttgaagctgcacaaggcgaacctccaatcatatcaaccaccgtccacattgtacaacgtgtaaaggagaaggttgctatgggcaatatcgaggcaattattgacccacgatttggtggcgactacgatcccaattcagtctggaaggctgtggacatagcactgttgtgcacgaaggaagcatctcatgaaaggccaacaatgagtacagtagtggcagagctaaaggttgcattggcattggaaaatgctcgtgcaagtggtagcattagtgacattagtcaaggaggtgccaatttcgagctatcactgctgtcagcaagataa
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| Protein seq | MTNNFSVCIGEGGYGPVFHGRLKEGTQVAVKMHSPTSTIGKGMTEFLAEVESLTTVHHRYLVFLVGYCSNKNHLALIYEYMPNGSLYDHIRGKNAIVQTLRWHDRAHIALEAAQGEPPIISTTVHIVQRVKEKVAMGNIEAIIDPRFGGDYDPNSVWKAVDIALLCTKEASHERPTMSTVVAELKVALALENARASGSISDISQGGANFELSLLSAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.471702 | 2.985442 | 1.707986 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0355400 | SBH | 8.814496 | 8.050460 | 5.618421 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g19160 | RBH | 1.045942 | 1.082684 | 0.263534 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0355400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0007100 | RBH | 0.360081 | 0.761381 | 0.485566 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0007100 | RBH | 0.021575 | 0.000000 | 0.095482 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007260 | RBH | 0.469337 | 1.515820 | 3.716561 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0007200 | RBH | 0.056733 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0006980 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0199300 | SBH | 0.4295035 | 1.904256 | 1.9694425 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007310 | RBH | 0.092096 | 0.000000 | 0.178028 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0176600 | SBH | 2.5580595 | 32.6664675 | 6.983884 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0007220 | RBH | 0.049430 | 0.096666 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0007110 | SBH | 0.142830 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0007000 | RBH | 2.452066 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0006980 | RBH | 0.158854 | 0.0 | 0.309899 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0006990 | RBH | 0.096361 | 0.453330 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G007590 | RBH | 0.000000 | 1.346502 | 0.723738 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007390 | RBH | 0.790303 | 3.103171 | 2.169343 |
