Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_08g0002520 | OGI:08005610 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr08:2095897-2099238 | ||||||||
| Gene Symbol | RLCK245, OsRLCK245, PTK12, OsPTK12 | ||||||||||
| DNA seq | taaggcaacaatcagcttctattatcagagtggttacaaagcaggtctatacatcacacttacaaattgtcatctctccatacaccagctaacagtcaacactaatgctcaaaactgcattctctctatccaattgtgtcatccttgatcctagtatttttcatatcaacaaaacaaaagaattgcacagacaaaaaagaagaaagtgccaagaacaagaacagccgaaaatgttgtgtgtcagacatctgcaagatcagagacactcccaactgattcctgtctctgatggccggagagcgaagattgaacctcggatgcttccaagtcgacagattcatcgtctgctctacctggtggaggcctcctattgtgatgcttcttgctctggctgtgtttcgccacacggatcagagcctggacaacatctctcattgctgggcgcttgcgggaaactcggcttacgcatctgtaggccatagcagccatgtcgttgagctcctccacatcgaatgcgccttctaatcgagaatctgcaatctcctcccatccagttttgccatcagcattgattgcagcctgatcatagattgcattgtaagtcagcaattacaagccttaatgttctgagaaaaaaacaattcttgaacaaaaaagagtaaggaacaaattcttgaacaataagagtaaggaactaaggagggcgcttccttacaagctctacatattccattagaccttgttgagggtttctgccagcaatcatttcaaacagcaaaactccgtagctgtatacatcactcttctttgtgaacgatcgtgaggacacatactctggatcaagatatccataagttccacgtatgttggctccatttcgagtaaccatttcttctcttgataatccaaaatctgcaacctggacaacagaaagtgctcattagtctgagaataaaacattttagtacaataagacaccatatccagtggtatccaagaagtactgtatttcttcaaaaaattgcattattgtgtactacgttgaccatgtcactaaactagatgctgacttgatgaatataggtgcttaatatcatgatgggtagcagagatgtttcacataccctggcatgcatggactggtccagcaaaatgtttggtgatttgatgtcacggtgaactactggaggaactgcctgcactagagttgaatgagatcaaggaatctggttgcatttcatatgtatcatccttccaattatgaaatacaacagcctaccccatcatgtaggtactccaagccccgagcaacatccagagctatgtttaccctcaaatcccaccggagcggtgcaatgttttcacctaaaccataaaaaggatattaagaaagccaaaaaaaaaaaaaaactgagggcacaggttctttcaagaaagtatagcatgctatcatatggagataatgaataccatataagtgcgatgcaaggcttccattaggcatgaatgcatataatagcatatgctgccctttttcagcgcaatagccaaccaaattcaccaggttcctgtggtgcaatcgtccaagaagtaaaacctgaaattaacagtctatcaaataaataccaagcagtcagagtttctggcgcataaagattggcttacctcagtttgaaactccttttcaccttgctttgaattgttagcaagcactttaacagcaagagtttcaccagatgacaaatcagctttataaacaggaccaaaggctccttgacccaatagtgttgtgaaattgctggtggccttctgcagctctctataaagagaaaattatgaacttcagaaagtgtatagtacaagataccttatgaatgtcttgcaaaaaataaaataaaattaatggcacacaattatgtagaaagcaaaaaattagtgataataattgtgttggaagtatcaatatgtgaggcaccaattaccggtaaaatttgagagaagtttatatcagcaaattctatgttcttgttgaacttaaaatcataagatataaaagtctcctttgatgtctaatagttactgacatttagtggtttaattttaccctccttacatttataaattatcagactcattgaagaagaaattacaaatataaaatatgcatatctcgtgggaagtacaattcctacaattaactaaatgtttcctctcgatgtgatttagaaagataacctctgtcaacaataatgaaccaattcatggtttcaaaagatttgcttatcaactaaaaagaacttgatcttaattggatgaaaaactattgatcttgaaaaataaaagagagacatcggccttcagtttgattcaccaaaacacctgagtgaggctggatgctatggtcaactgttaataagtgaagcacattttcatcgaatatataactcaattatattgaaattgaccacaataaggtccaacatggttgtccaattcgacatatcatcgatcattacatccagatatgcatatttgacatgttttcctgtcctcacaccagttttctccccatctagaatgctagaaataaatcttgcaaaatctcattgtacaaccccctctctataagttctccaggtcccactttcctaatgtacacttccactgtgacattcagaaaaaaaaaagtccaaaactaaaagaaaagaattagtaggtaaagaaatatgtgggaagtcaaaggaggataaacaaccactaaactttgaaagttaacaggaatcgattaccaaatgtttcagtaataaacaaattgcccatcactaatcctaaaactagatcaattgttcaacatacaaattagtacaaacaaccatgagagtgcaaggaaacatacttgtatgcatatttgggtatcccagaagctgatatcacactcttcctaccaggcccttccagccacatagatgctccgcgatcttcaacctcccttggcgattcctgccccgtagtggagttcgagagtatcgtgcaagcattaacaccattggcacggatgggaatcgtcgatgccctccttgagctactactccttatctgtgcctgagatcgccgatacctcaagcacagaagtatcccaactgccagcagcacccctatcaccactccaactgttattccaatgatcaggccctcagaaacccctttcatcctccccatttcgccgcagatcttagcaattgagatattgcatccacctcatggaagctctaacagctatgcctgtcctgccaagaagtacataattcagaatttgccaaaagtctttgaacgtgtgagcat
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| CDS seq | atggggaggatgaaaggggtttctgagggcctgatcattggaataacagttggagtggtgataggggtgctgctggcagttgggatacttctgtgcttgaggtatcggcgatctcaggcacagataaggagtagtagctcaaggagggcatcgacgattcccatccgtgccaatggtgttaatgcttgcacgatactctcgaactccactacggggcaggaatcgccaagggaggttgaagatcgcggagcatctatgtggctggaagggcctggtaggaagagtgtgatatcagcttctgggatacccaaatatgcatacaaagagctgcagaaggccaccagcaatttcacaacactattgggtcaaggagcctttggtcctgtttataaagctgatttgtcatctggtgaaactcttgctgttaaagtgcttgctaacaattcaaagcaaggtgaaaaggagtttcaaactgaggttttacttcttggacgattgcaccacaggaacctggtgaatttggttggctattgcgctgaaaaagggcagcatatgctattatatgcattcatgcctaatggaagccttgcatcgcacttatatggtgaaaacattgcaccgctccggtgggatttgagggtaaacatagctctggatgttgctcggggcttggagtacctacatgatggggcagttcctccagtagttcaccgtgacatcaaatcaccaaacattttgctggaccagtccatgcatgccagggttgcagattttggattatcaagagaagaaatggttactcgaaatggagccaacatacgtggaacttatggatatcttgatccagagtatgtgtcctcacgatcgttcacaaagaagagtgatgtatacagctacggagttttgctgtttgaaatgattgctggcagaaaccctcaacaaggtctaatggaatatgtagagcttgctgcaatcaatgctgatggcaaaactggatgggaggagattgcagattctcgattagaaggcgcattcgatgtggaggagctcaacgacatggctgctatggcctacagatgcgtaagccgagtttcccgcaagcgcccagcaatgagagatgttgtccaggctctgatccgtgtggcgaaacacagccagagcaagaagcatcacaataggaggcctccaccaggtagagcagacgatgaatctgtcgacttggaagcatccgaggttcaatcttcgctctccggccatcagagacaggaatcagttgggagtgtctctgatcttgcagatgtctga
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| Protein seq | MGRMKGVSEGLIIGITVGVVIGVLLAVGILLCLRYRRSQAQIRSSSSRRASTIPIRANGVNACTILSNSTTGQESPREVEDRGASMWLEGPGRKSVISASGIPKYAYKELQKATSNFTTLLGQGAFGPVYKADLSSGETLAVKVLANNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCAEKGQHMLLYAFMPNGSLASHLYGENIAPLRWDLRVNIALDVARGLEYLHDGAVPPVVHRDIKSPNILLDQSMHARVADFGLSREEMVTRNGANIRGTYGYLDPEYVSSRSFTKKSDVYSYGVLLFEMIAGRNPQQGLMEYVELAAINADGKTGWEEIADSRLEGAFDVEELNDMAAMAYRCVSRVSRKRPAMRDVVQALIRVAKHSQSKKHHNRRPPPGRADDESVDLEASEVQSSLSGHQRQESVGSVSDLADV |
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| Function | Calcium/calmodulin-regulated receptor-like kinase 1 [UniProtKB/Swiss-Prot:Q9FIU5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_08g0002520 | OsPr106_08g0002520.01 | Chr08 | 2095897 | 2099238 | - | NAM | ||
| CDS seq | atggggaggatgaaaggggtttctgagggcctgatcattggaataacagttggagtggtgataggggtgctgctggcagttgggatacttctgtgcttgaggtatcggcgatctcaggcacagataaggagtagtagctcaaggagggcatcgacgattcccatccgtgccaatggtgttaatgcttgcacgatactctcgaactccactacggggcaggaatcgccaagggaggttgaagatcgcggagcatctatgtggctggaagggcctggtaggaagagtgtgatatcagcttctgggatacccaaatatgcatacaaagagctgcagaaggccaccagcaatttcacaacactattgggtcaaggagcctttggtcctgtttataaagctgatttgtcatctggtgaaactcttgctgttaaagtgcttgctaacaattcaaagcaaggtgaaaaggagtttcaaactgaggttttacttcttggacgattgcaccacaggaacctggtgaatttggttggctattgcgctgaaaaagggcagcatatgctattatatgcattcatgcctaatggaagccttgcatcgcacttatatggtgaaaacattgcaccgctccggtgggatttgagggtaaacatagctctggatgttgctcggggcttggagtacctacatgatggggcagttcctccagtagttcaccgtgacatcaaatcaccaaacattttgctggaccagtccatgcatgccagggttgcagattttggattatcaagagaagaaatggttactcgaaatggagccaacatacgtggaacttatggatatcttgatccagagtatgtgtcctcacgatcgttcacaaagaagagtgatgtatacagctacggagttttgctgtttgaaatgattgctggcagaaaccctcaacaaggtctaatggaatatgtagagcttgctgcaatcaatgctgatggcaaaactggatgggaggagattgcagattctcgattagaaggcgcattcgatgtggaggagctcaacgacatggctgctatggcctacagatgcgtaagccgagtttcccgcaagcgcccagcaatgagagatgttgtccaggctctgatccgtgtggcgaaacacagccagagcaagaagcatcacaataggaggcctccaccaggtagagcagacgatgaatctgtcgacttggaagcatccgaggttcaatcttcgctctccggccatcagagacaggaatcagttgggagtgtctctgatcttgcagatgtctga
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| Protein seq | MGRMKGVSEGLIIGITVGVVIGVLLAVGILLCLRYRRSQAQIRSSSSRRASTIPIRANGVNACTILSNSTTGQESPREVEDRGASMWLEGPGRKSVISASGIPKYAYKELQKATSNFTTLLGQGAFGPVYKADLSSGETLAVKVLANNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCAEKGQHMLLYAFMPNGSLASHLYGENIAPLRWDLRVNIALDVARGLEYLHDGAVPPVVHRDIKSPNILLDQSMHARVADFGLSREEMVTRNGANIRGTYGYLDPEYVSSRSFTKKSDVYSYGVLLFEMIAGRNPQQGLMEYVELAAINADGKTGWEEIADSRLEGAFDVEELNDMAAMAYRCVSRVSRKRPAMRDVVQALIRVAKHSQSKKHHNRRPPPGRADDESVDLEASEVQSSLSGHQRQESVGSVSDLADV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 5.528560 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0138700 | RBH | 0.134514 | 0.000000 | 0.234324 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g04420 | RBH | 0.091267 | 0.000000 | 0.060519 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0138700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0002670 | RBH | 0.073929 | 4.338076 | 1.220814 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0002720 | RBH | 0.035040 | 1.608637 | 0.549159 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0002710 | RBH | 0.0 | 1.227629 | 2.785276 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0002690 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0002990 | RBH | 0.0 | 0.0 | 0.902026 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0031500 | RBH | 0.9897415 | 6.4232595 | 0.8692625 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0002390 | RBH | 0.0 | 0.620896 | 0.422776 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0036000 | RBH | 0.613502 | 4.4433505 | 6.658858 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0002530 | RBH | 0.0 | 0.072847 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0002540 | RBH | 0.109353 | 1.811172 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0002370 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0002580 | RBH | 0.0 | 0.572013 | 0.276030 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0002500 | RBH | 0.0 | 2.491255 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G002510 | RBH | 0.000000 | 0.0 | 0.415448 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0002380 | RBH | 0.0 | 2.368519 | 0.940580 |
