Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_07g0025580 | OGI:07074750 | 13/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr07:28068856-28069116 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcgtgtgctgcgggaaggcgaggacatcggcacgacgcctgtcgtcgactctttcgagtggaaggatgcggccacgtacacaatgcctgaaggcagcgctgccgcctgtcgtgtccggcgtgacgtacaccgacaagatcaagttggcagcgacatgcaccacggagagtacagcaagaagctagccaccacaatgtacgagaaggtcgccggagtcgggaccgtcgtggactcgtggctggcaaggtgcagcaagtga |
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| CDS seq | atgcgtgtgctgcgggaaggcgaggacatcggcacgacgcctgtcgtcgactctttcgagtggaaggatgcggccacgtacacaatgcctgaaggcagcgctgccgcctgtcgtgtccggcgtgacgtacaccgacaagatcaagttggcagcgacatgcaccacggagagtacagcaagaagctagccaccacaatgtacgagaaggtcgccggagtcgggaccgtcgtggactcgtggctggcaaggtgcagcaagtga |
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| Protein seq | MRVLREGEDIGTTPVVDSFEWKDAATYTMPEGSAAACRVRRDVHRQDQVGSDMHHGEYSKKLATTMYEKVAGVGTVVDSWLARCSK |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_07g0025580 | OsPr106_07g0025580.01 | Chr07 | 28068856 | 28069116 | + | NAM | ||
| CDS seq | atgcgtgtgctgcgggaaggcgaggacatcggcacgacgcctgtcgtcgactctttcgagtggaaggatgcggccacgtacacaatgcctgaaggcagcgctgccgcctgtcgtgtccggcgtgacgtacaccgacaagatcaagttggcagcgacatgcaccacggagagtacagcaagaagctagccaccacaatgtacgagaaggtcgccggagtcgggaccgtcgtggactcgtggctggcaaggtgcagcaagtga
More
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| Protein seq | MRVLREGEDIGTTPVVDSFEWKDAATYTMPEGSAAACRVRRDVHRQDQVGSDMHHGEYSKKLATTMYEKVAGVGTVVDSWLARCSK |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.703893 | 0.000000 | 1.629672 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025410 | SBH | 0.000000 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0025480 | SBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0025310 | SBH | 0.379354 | 0.000000 | 0.599194 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0025330 | RBH | 0.000000 | 0.071093 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0025490 | SBH | 0.802174 | 0.000000 | 1.423092 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025990 | RBH | 0.000000 | 0.101747 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0025360 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0025430 | SBH | 0.000000 | 2.100342 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0025320 | RBH | 0.508073 | 6.937309 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0025580 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0025240 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G025230 | RBH | 0.000000 | 0.000000 | 0.679776 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0025240 | RBH | 0.000000 | 0.000000 | 0.000000 |
