Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_07g0015310 | OGI:07052560 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr07:19427648-19429966 | ||||||||
| Gene Symbol | WAK70, OsWAK70, OsRLCK230, RLCK230 | ||||||||||
| DNA seq | atggcggagcagtggagactgcatcatgcgtcgatgtccatctcctcgtctcctctcatcgccggcagattcattgccatccaccacttgctgagccaccgcccccactggaggagctggagaggggcgctcggggtgagcagccggccaaaatcctcggccttttgcccccctcaaatctctgacccgagattggaagttgcggcagagccagccatgcaatgtccctcatgcttgtcgtgctccagcttaggctcctcttcctcctctccagcctcatcatcaacaccatcctggcgtgccctccctccatcccgaatcctcagctggattggtggcaaaatcttttgttgttctcaatttatcaatagggtttttttaggcgatctgatgcagccacatgcttgcatagctcatcagaggagatcatgcgaatgccgccatcgttgccctcgccacggtggtcctccatggaggacaccacatcactgttgtatgttgttgtgtgggtcatgtgaaacgacggcttgtttctttttctttctcttttttacctgcagacaagaggaagaaggagagaggtctgaggggcattatcgtcttttaaaaaattgctctctccatttgatccaagaaataataaagtaatggcttcagtgtcctttagcaaattacatctttttaaagtgtcctaaagccaagtcacgtttttatgatgtcccacagctaattacatattttttgagtgtcctgtagcaaattttgcctacattaaaatacggagggagtaacgtgcaatctaaagagaattggctttcctatgcagatgatgttgtttcgtctgaaggaatttatttccccaccgggctggcgaaggataccggccaaacttgtatcgggagtgttcttttttgtccagcctcatgtattatttaggcaaattatgatgaaggacatcgtgactttacggttttagctgtaaaacactgtgcaaaatgacttttgagagaagacactcttgaaagttagatacttgctggtgaacaccttacccataaaaataaggcaaattttgctacaggacatcgtgacttcgtggttttaaccgtaagacatcgcacgaagtgagtcttggggaagacAttctatataataacgtgataatttgctagcggacactgcgttaattattttactccatccgtctcaaaataagtgcaattttacactattcacgttcaacgtttgaccgttcgtcttatttgaaatttttttatgattagtatttttattgctattttacactattcaatgctatatatatatatatatatatataactagcacatcaaaattgaaggaaaatctcatttcttttccttcatcttcatgtccagtgctgtttcgggaccattctcacatatttccaaaagcaataaaatttctctctttttctttagaattagcacatcaaaactaaagggatgatagaaaaatctgagatctcccccaccccccccccccccaaaaaaaaaaaatctcatttcttttccttcatcttgatgtccagtgctgtttcggaaccattctcacatattttcaaaagcaatAaaatttggtttaagagaacgtgaaaaatattttccatgcacatacgtataatgaataggagaagaatgaaaaataggtactatgatcttAaaacagaggccaactgtGagaggaatgtttatgcatacaaggccatcattctttcatatatataaggatttttttagatctgtactgccataaataatttctaacatatagtatatttttgtgacaacAtgctaagattagctgtcttgacacatttgtatcttcaaaatagcattgaattgttgttgctccagtagggctttcaactactatttttgataaaattcagagtaaactggaaatcgtacacatgatctcctcagaaaagtattccatgcgttttattgcctctgcacactatAAattacagaaaaacaatgaatatgttgctttgactaatctaccatcttcatgaatctgcaggcacaatataaccacatattctgtgccactcatatgggagactggtatgagaaactttcacaatcttttagggacactgcaaatgaagtattggcaaaagcagatattgatccaaatgttaggtgcttcacaagaaggcagatgaagcacatcacaaacaactacggcactgtcctgggaaaaggaggtttttggctgctgcgtagatcatgtctaaaattgagatctagaattgagattgatctggttgtatga
More
|
||||||||||
| CDS seq | atggcggagcagtggagactgcatcatgcgtcgatgtccatctcctcgtctcctctcatcgccggcagattcattgccatccaccacttgctgagccaccgcccccactggaggagctggagaggggcgctcggggcacaatataaccacatattctgtgccactcatatgggagactggtatgagaaactttcacaatcttttagggacactgcaaatgaagtattggcaaaagcagatattgatccaaatgttaggtgcttcacaagaaggcagatgaagcacatcacaaacaactacggcactgtcctgggaaaaggaggtttttggctgctgcgtagatcatgtctaaaattgagatctagaattgagattgatctggttgtatga |
||||||||||
| Protein seq | MAEQWRLHHASMSISSSPLIAGRFIAIHHLLSHRPHWRSWRGALGAQYNHIFCATHMGDWYEKLSQSFRDTANEVLAKADIDPNVRCFTRRQMKHITNNYGTVLGKGGFWLLRRSCLKLRSRIEIDLVV |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_07g0015310 | OsPr106_07g0015310.01 | Chr07 | 19427648 | 19429966 | + | NAM | ||
| CDS seq | atggcggagcagtggagactgcatcatgcgtcgatgtccatctcctcgtctcctctcatcgccggcagattcattgccatccaccacttgctgagccaccgcccccactggaggagctggagaggggcgctcggggcacaatataaccacatattctgtgccactcatatgggagactggtatgagaaactttcacaatcttttagggacactgcaaatgaagtattggcaaaagcagatattgatccaaatgttaggtgcttcacaagaaggcagatgaagcacatcacaaacaactacggcactgtcctgggaaaaggaggtttttggctgctgcgtagatcatgtctaaaattgagatctagaattgagattgatctggttgtatga
More
|
|||||||
| Protein seq | MAEQWRLHHASMSISSSPLIAGRFIAIHHLLSHRPHWRSWRGALGAQYNHIFCATHMGDWYEKLSQSFRDTANEVLAKADIDPNVRCFTRRQMKHITNNYGTVLGKGGFWLLRRSCLKLRSRIEIDLVV |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0494800 | SBH | 0.184121 | 0.094410 | 0.327825 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g31210 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0494800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0015470 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0015370 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0015340 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0015250 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0015330 | SBH | 0.0 | 1.501342 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0307700 | RBH | 0.1574245 | 0.4439455 | 0.273859 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0015810 | SBH | 0.0 | 0.280000 | 0.053341 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0319500 | RBH | 0.53648 | 0.294704 | 2.1077665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0015080 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0015240 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0015230 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G015230 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0015150 | SBH | 0.0 | 0.000000 | 0.0 |
