Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_07g0010240 | OGI:07029990 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr07:10704515-10708317 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | aggtccagcaatggctgagaaactcatcacccacgcgctgcgagacgcactgtttcagttcgcggtcaagtccaggaagctggcgtctccgatgttgtgggcgttggggcgcgcgtcgacggggccggtcaccgtcggcgacgacgagctggcggcgctcaggtccatgctccgcagggtccacgccgcgctccgcgacgccgacagcctgtccgtcaccgaccactccgtccgcctctggctcgccgagctcggcgacctcgagtaccgcgccgaggacgtgttcgaggagctcgagtacgagtgccaccgcgccgcgcagctggaggacctcaagatcgacctcctgcgcgccgcggcgctggcgacggggaagcggaagagggaggtcgcgcagctgttcgccgccgcgccggccgcgcgcctccgccgcaagatcgacgacatttgggcgaggtacgaggagatcgcgtcagatcggaagaagctccggctaaggcccggtgacggcgcggcacggccggcggtcggtgccctcgtgccgagcagctcgctcccccgttgccagatccacggccgggagcgcgacctccagagggtcgtcgagatggtctgccaaagccagcccgacggcaggagaaactacgccgtcgtggcaatcgttggtatggccggcgttgggaagacgtcgcttatgcagcacgtctgcggcgaggaggccgtcgcgtcgcgtttcgacctcgcgctctgggtctgggtgtcccaagagttcgatgtcgtcggcgtgacggcaaagatcgttgaggccatcaccaggtcacgccccgactgctccgagctgagcgcgctccacggaaccatggtcgaacaccttacgggcaagaggtgcctgctcgtcctcgatgacgtctgggatgacaaccccaaccattgggacaccatcaccgcgcagctgagcttctgcgcgccggggagcacagtcgtcgtcacgaccaggagcaggatggtcgccaagatggttacccccaatgtgtaccatcttggctgcttgtccgacgaacactgctggctcgtgtgccagcgacgtgcatcgcacgggtgcaccaccgccaccattgatgatgagcttaccaacatcggccagcagattgcaaagaaatgcagaggcgtaccattggcagcagaggcagcaggcacagccatgagcacctcaatcaccaggaagcactggacacatgtactgaatagcaacctgtgggcagacaatgatgaggccaagaaccatgtgctgccagcactcaaggtgagctatgaccatttgcgccattgaaacgatgcttcgccttctgctcattgttccccaagagcttcgtcttcgacaaggatgcgctggttcagctctggacagcgcagggcttcattgatgccggaggagaacagaggcctgaagatgtaggcaccggctacttctatgatttggtagcaagatgcttcttccagccatccccatctcatggaatcgatcaagagaagtttgtcatgcatgatctatatcaggagcttgcacagtttgtttcaggcaatgaatgcagaatgatacaacatattgtttcaggcaatgaatgccggacgatacagcagagtaacctgaaccgagccgacaagacatcggctcgccatttgtccattgtcaacaatgagtcccatcctgagcaagaactatcattggactcattttgtggccaagatctgagaacattcctgtttctttcaagattggaacagatcatccatggagaaatgccactcagaagaaagattgctccatatggactgatgacagattttgaatgtctaagggttctagatttaagcaacactgacattgtggaggtaccaaagtctattggaagcctgatacatctgaggtaccttggtctggataacactagaattcagatgctgccggagtcagtaggtgctctcttccacttacagacaatcaagcttaaccattgttcctcccttactcagttgccccacggcagtaagctcctgcagaacttaagatgctttgagatagcacattccaatgtacagatgccatctgggatcagagcattgactagcctacagaagctacctgtttttgtcgtcggagatggatctgctggatgcggaatcggagagctggatgagctgataaacatcagaggagacctgcacattataggtttaagcaatcttgatgctgcacaagctgccaatgtcaatctatggaaaaaggagggacttcagaagctaacactcgaatggtgtgacatacttcagaattcagacgtgacaattcagaagtgtccagctagttggacctgaatttcttggcgatgttggagatatcccttacaacaacaggaagaaagcctattttgcttttcctgcattggagtctctgaagttcagggatatgggagcctgggaggaatggtcaggtgtcaaggatgaacacttcccagaacttaagtatctcagcattgttaggtgtggaaagctgaaggtattgcgtgatctgcagccaaatgaagcaaacagagtaccagattgtcgttgcgtgccacaacagaatgacagagcagctcaggtgttacagtgtctcagaccaaattcaaatctggaggagctcatcatcaaaggttataatggatcatcattcccatcatgggtagggtctctgcctttggacaggttagcttctatagaactaaaagattgccaaaattgcgaagaactgccgccacttgggtgcttgccatccctgaaacatgttgtgatacagtcactgccaagtgtccagctagttggacctgaatttcttggcgatgttggagatatcccttacaacaacaggaagaaagcctattttgcttttcctgcattggagtctctgaagttcagggatatgggagcctgggaggaatggtcaggtgtcaaggatgaacacttcccagaacttaagtatctcagcattgttaggtgtggaaagctgaaggtattgcccaacttcacttcaggaccaaagcagagaatcaggaattgtgagaaactactccagcctctatgccaggtatgttcttcaagttcaagtcagatgaataccatcaatttttcttgcatcgatttttatataagagatttttttatatgcaaatttcgttgttcatctgctcttggatcatttttactatagtcacagctgacagctgcaaatatcatttctctcttttttcttatggattgcacaaatatgctcataattgctcatcagttacgaccaagaatcattaaatcatatgaaatgagcattagactttttgcactcacaaacagggtgaatgaggcagactatttcagttaacagggacttctggtttacaatataaaaactattttagcccatactacaatttttttatcatggaataattaaactaaaaataatttgttcattcttccctgatcagaatatacactggaatttgatggaatacataccaccttcaagtgaactgtcgtacacatgcatggcagaaggtgatatttcaatcctagaagcttcctgttcatacagtacatagaacattggaaatggagggaggggcacccattattgtaaatgctcatggattggtgctattttgtcagaaaatcttatttccaggattgacatgaatttttcagtaagtacacatcgtatgaaattgttttgttccaaatgtacccgatcaagaatattcattcacacc
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| CDS seq | atggctgagaaactcatcacccacgcgctgcgagacgcactgtttcagttcgcggtcaagtccaggaagctggcgtctccgatgttgtgggcgttggggcgcgcgtcgacggggccggtcaccgtcggcgacgacgagctggcggcgctcaggtccatgctccgcagggtccacgccgcgctccgcgacgccgacagcctgtccgtcaccgaccactccgtccgcctctggctcgccgagctcggcgacctcgagtaccgcgccgaggacgtgttcgaggagctcgagtacgagtgccaccgcgccgcgcagctggaggacctcaagatcgacctcctgcgcgccgcggcgctggcgacggggaagcggaagagggaggtcgcgcagctgttcgccgccgcgccggccgcgcgcctccgccgcaagatcgacgacatttgggcgaggtacgaggagatcgcgtcagatcggaagaagctccggctaaggcccggtgacggcgcggcacggccggcggtcggtgccctcgtgccgagcagctcgctcccccgttgccagatccacggccgggagcgcgacctccagagggtcgtcgagatggtctgccaaagccagcccgacggcaggagaaactacgccgtcgtggcaatcgttggtatggccggcgttgggaagacgtcgcttatgcagcacgtctgcggcgaggaggccgtcgcgtcgcgtttcgacctcgcgctctgggtctgggtgtcccaagagttcgatgtcgtcggcgtgacggcaaagatcgttgaggccatcaccaggtcacgccccgactgctccgagctgagcgcgctccacggaaccatggtcgaacaccttacgggcaagaggtgcctgctcgtcctcgatgacgtctgggatgacaaccccaaccattgggacaccatcaccgcgcagctgagcttctgcgcgccggggagcacagtcgtcgtcacgaccaggagcaggatggtcgccaagatggttacccccaatgtgtaccatcttggctgcttgtccgacgaacactgctggctcgtgtgccagcgacgtgcatcgcacgggtgcaccaccgccaccattgatgatgagcttaccaacatcggccagcagattgcaaagaaatgcagaggcgtaccattggcagcagaggcagcaggcacagccatgagcacctcaatcaccaggaagcactggacacatgtactgaatagcaacctgtgggcagacaatgatgaggccaagaaccatgtgctgccagcactcaagagcttcgtcttcgacaaggatgcgctggttcagctctggacagcgcagggcttcattgatgccggaggagaacagaggcctgaagatgtaggcaccggctacttctatgatttggtagcaagatgcttcttccagccatccccatctcatggaatcgatcaagagaagtttgtcatgcatgatctatatcaggagcttgcacagtttgtttcaggcaatgaatgcagaatgatacaacatattgtttcaggcaatgaatgccggacgatacagcagagtaacctgaaccgagccgacaagacatcggctcgccatttgtccattgtcaacaatgagtcccatcctgagcaagaactatcattggactcattttgtggccaagatctgagaacattcctgtttctttcaagattggaacagatcatccatggagaaatgccactcagaagaaagattgctccatatggactgatgacagattttgaatgtctaagggttctagatttaagcaacactgacattgtggaggtaccaaagtctattggaagcctgatacatctgaggtaccttggtctggataacactagaattcagatgctgccggagtcagtaggtgctctcttccacttacagacaatcaagcttaaccattgttcctcccttactcagttgccccacggcagtaagctcctgcagaacttaagatgctttgagatagcacattccaatgtacagatgccatctgggatcagagcattgactagcctacagaagctacctgtttttgtcgtcggagatggatctgctggatgcggaatcggagagctggatgagctgataaacatcagaggagacctgcacattataggtttaagcaatcttgatgctgcacaagctgccaatgtcaatctatggaaaaaggagggacttcagaagctaacactcgaatggaagaaagcctattttgcttttcctgcattggagtctctgaagttcagggatatgggagcctgggaggaatggtcaggtgtcaaggatgaacacttcccagaacttaagtatctcagcattgttaggtgtggaaagctgaaggtattgcgtgatctgcagccaaatgaagcaaacagagtaccagattgtcgttgcgtgccacaacagaatgacagagcagctcaggtgttacagtgtctcagaccaaattcaaatctggaggagctcatcatcaaaggttataatggatcatcattcccatcatgggtagggtctctgcctttggacaggttagcttctatagaactaaaagattgccaaaattgcgaagaactgccgccacttgggtgcttgccatccctgaaacatgttgtgatacagtcactgccaagtgtccagctagttggacctgaatttcttggcgatgttggagatatcccttacaacaacaggaagaaagcctattttgcttttcctgcattggagtctctgaagttcagggatatgggagcctgggaggaatggtcaggtgtcaaggatgaacacttcccagaacttaagtatctcagcattgttaggtgtggaaagctgaaggtattgcccaacttcacttcaggaccaaagcagagaatcaggaattgtgagaaactactccagcctctatgccagaatatacactggaatttgatggaatacataccaccttcaagtgaactgtcgtacacatgcatggcagaaggtgatatttcaatcctagaagcttcctgttcatacagtacatag
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| Protein seq | MAEKLITHALRDALFQFAVKSRKLASPMLWALGRASTGPVTVGDDELAALRSMLRRVHAALRDADSLSVTDHSVRLWLAELGDLEYRAEDVFEELEYECHRAAQLEDLKIDLLRAAALATGKRKREVAQLFAAAPAARLRRKIDDIWARYEEIASDRKKLRLRPGDGAARPAVGALVPSSSLPRCQIHGRERDLQRVVEMVCQSQPDGRRNYAVVAIVGMAGVGKTSLMQHVCGEEAVASRFDLALWVWVSQEFDVVGVTAKIVEAITRSRPDCSELSALHGTMVEHLTGKRCLLVLDDVWDDNPNHWDTITAQLSFCAPGSTVVVTTRSRMVAKMVTPNVYHLGCLSDEHCWLVCQRRASHGCTTATIDDELTNIGQQIAKKCRGVPLAAEAAGTAMSTSITRKHWTHVLNSNLWADNDEAKNHVLPALKSFVFDKDALVQLWTAQGFIDAGGEQRPEDVGTGYFYDLVARCFFQPSPSHGIDQEKFVMHDLYQELAQFVSGNECRMIQHIVSGNECRTIQQSNLNRADKTSARHLSIVNNESHPEQELSLDSFCGQDLRTFLFLSRLEQIIHGEMPLRRKIAPYGLMTDFECLRVLDLSNTDIVEVPKSIGSLIHLRYLGLDNTRIQMLPESVGALFHLQTIKLNHCSSLTQLPHGSKLLQNLRCFEIAHSNVQMPSGIRALTSLQKLPVFVVGDGSAGCGIGELDELINIRGDLHIIGLSNLDAAQAANVNLWKKEGLQKLTLEWKKAYFAFPALESLKFRDMGAWEEWSGVKDEHFPELKYLSIVRCGKLKVLRDLQPNEANRVPDCRCVPQQNDRAAQVLQCLRPNSNLEELIIKGYNGSSFPSWVGSLPLDRLASIELKDCQNCEELPPLGCLPSLKHVVIQSLPSVQLVGPEFLGDVGDIPYNNRKKAYFAFPALESLKFRDMGAWEEWSGVKDEHFPELKYLSIVRCGKLKVLPNFTSGPKQRIRNCEKLLQPLCQNIHWNLMEYIPPSSELSYTCMAEGDISILEASCSYST |
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| Function | Putative disease resistance protein At3g14460 [UniProtKB/Swiss-Prot:Q9LRR5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_07g0010240 | OsPr106_07g0010240.01 | Chr07 | 10704515 | 10708317 | + | NAM | ||
| CDS seq | atggctgagaaactcatcacccacgcgctgcgagacgcactgtttcagttcgcggtcaagtccaggaagctggcgtctccgatgttgtgggcgttggggcgcgcgtcgacggggccggtcaccgtcggcgacgacgagctggcggcgctcaggtccatgctccgcagggtccacgccgcgctccgcgacgccgacagcctgtccgtcaccgaccactccgtccgcctctggctcgccgagctcggcgacctcgagtaccgcgccgaggacgtgttcgaggagctcgagtacgagtgccaccgcgccgcgcagctggaggacctcaagatcgacctcctgcgcgccgcggcgctggcgacggggaagcggaagagggaggtcgcgcagctgttcgccgccgcgccggccgcgcgcctccgccgcaagatcgacgacatttgggcgaggtacgaggagatcgcgtcagatcggaagaagctccggctaaggcccggtgacggcgcggcacggccggcggtcggtgccctcgtgccgagcagctcgctcccccgttgccagatccacggccgggagcgcgacctccagagggtcgtcgagatggtctgccaaagccagcccgacggcaggagaaactacgccgtcgtggcaatcgttggtatggccggcgttgggaagacgtcgcttatgcagcacgtctgcggcgaggaggccgtcgcgtcgcgtttcgacctcgcgctctgggtctgggtgtcccaagagttcgatgtcgtcggcgtgacggcaaagatcgttgaggccatcaccaggtcacgccccgactgctccgagctgagcgcgctccacggaaccatggtcgaacaccttacgggcaagaggtgcctgctcgtcctcgatgacgtctgggatgacaaccccaaccattgggacaccatcaccgcgcagctgagcttctgcgcgccggggagcacagtcgtcgtcacgaccaggagcaggatggtcgccaagatggttacccccaatgtgtaccatcttggctgcttgtccgacgaacactgctggctcgtgtgccagcgacgtgcatcgcacgggtgcaccaccgccaccattgatgatgagcttaccaacatcggccagcagattgcaaagaaatgcagaggcgtaccattggcagcagaggcagcaggcacagccatgagcacctcaatcaccaggaagcactggacacatgtactgaatagcaacctgtgggcagacaatgatgaggccaagaaccatgtgctgccagcactcaagagcttcgtcttcgacaaggatgcgctggttcagctctggacagcgcagggcttcattgatgccggaggagaacagaggcctgaagatgtaggcaccggctacttctatgatttggtagcaagatgcttcttccagccatccccatctcatggaatcgatcaagagaagtttgtcatgcatgatctatatcaggagcttgcacagtttgtttcaggcaatgaatgcagaatgatacaacatattgtttcaggcaatgaatgccggacgatacagcagagtaacctgaaccgagccgacaagacatcggctcgccatttgtccattgtcaacaatgagtcccatcctgagcaagaactatcattggactcattttgtggccaagatctgagaacattcctgtttctttcaagattggaacagatcatccatggagaaatgccactcagaagaaagattgctccatatggactgatgacagattttgaatgtctaagggttctagatttaagcaacactgacattgtggaggtaccaaagtctattggaagcctgatacatctgaggtaccttggtctggataacactagaattcagatgctgccggagtcagtaggtgctctcttccacttacagacaatcaagcttaaccattgttcctcccttactcagttgccccacggcagtaagctcctgcagaacttaagatgctttgagatagcacattccaatgtacagatgccatctgggatcagagcattgactagcctacagaagctacctgtttttgtcgtcggagatggatctgctggatgcggaatcggagagctggatgagctgataaacatcagaggagacctgcacattataggtttaagcaatcttgatgctgcacaagctgccaatgtcaatctatggaaaaaggagggacttcagaagctaacactcgaatggaagaaagcctattttgcttttcctgcattggagtctctgaagttcagggatatgggagcctgggaggaatggtcaggtgtcaaggatgaacacttcccagaacttaagtatctcagcattgttaggtgtggaaagctgaaggtattgcgtgatctgcagccaaatgaagcaaacagagtaccagattgtcgttgcgtgccacaacagaatgacagagcagctcaggtgttacagtgtctcagaccaaattcaaatctggaggagctcatcatcaaaggttataatggatcatcattcccatcatgggtagggtctctgcctttggacaggttagcttctatagaactaaaagattgccaaaattgcgaagaactgccgccacttgggtgcttgccatccctgaaacatgttgtgatacagtcactgccaagtgtccagctagttggacctgaatttcttggcgatgttggagatatcccttacaacaacaggaagaaagcctattttgcttttcctgcattggagtctctgaagttcagggatatgggagcctgggaggaatggtcaggtgtcaaggatgaacacttcccagaacttaagtatctcagcattgttaggtgtggaaagctgaaggtattgcccaacttcacttcaggaccaaagcagagaatcaggaattgtgagaaactactccagcctctatgccagaatatacactggaatttgatggaatacataccaccttcaagtgaactgtcgtacacatgcatggcagaaggtgatatttcaatcctagaagcttcctgttcatacagtacatag
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| Protein seq | MAEKLITHALRDALFQFAVKSRKLASPMLWALGRASTGPVTVGDDELAALRSMLRRVHAALRDADSLSVTDHSVRLWLAELGDLEYRAEDVFEELEYECHRAAQLEDLKIDLLRAAALATGKRKREVAQLFAAAPAARLRRKIDDIWARYEEIASDRKKLRLRPGDGAARPAVGALVPSSSLPRCQIHGRERDLQRVVEMVCQSQPDGRRNYAVVAIVGMAGVGKTSLMQHVCGEEAVASRFDLALWVWVSQEFDVVGVTAKIVEAITRSRPDCSELSALHGTMVEHLTGKRCLLVLDDVWDDNPNHWDTITAQLSFCAPGSTVVVTTRSRMVAKMVTPNVYHLGCLSDEHCWLVCQRRASHGCTTATIDDELTNIGQQIAKKCRGVPLAAEAAGTAMSTSITRKHWTHVLNSNLWADNDEAKNHVLPALKSFVFDKDALVQLWTAQGFIDAGGEQRPEDVGTGYFYDLVARCFFQPSPSHGIDQEKFVMHDLYQELAQFVSGNECRMIQHIVSGNECRTIQQSNLNRADKTSARHLSIVNNESHPEQELSLDSFCGQDLRTFLFLSRLEQIIHGEMPLRRKIAPYGLMTDFECLRVLDLSNTDIVEVPKSIGSLIHLRYLGLDNTRIQMLPESVGALFHLQTIKLNHCSSLTQLPHGSKLLQNLRCFEIAHSNVQMPSGIRALTSLQKLPVFVVGDGSAGCGIGELDELINIRGDLHIIGLSNLDAAQAANVNLWKKEGLQKLTLEWKKAYFAFPALESLKFRDMGAWEEWSGVKDEHFPELKYLSIVRCGKLKVLRDLQPNEANRVPDCRCVPQQNDRAAQVLQCLRPNSNLEELIIKGYNGSSFPSWVGSLPLDRLASIELKDCQNCEELPPLGCLPSLKHVVIQSLPSVQLVGPEFLGDVGDIPYNNRKKAYFAFPALESLKFRDMGAWEEWSGVKDEHFPELKYLSIVRCGKLKVLPNFTSGPKQRIRNCEKLLQPLCQNIHWNLMEYIPPSSELSYTCMAEGDISILEASCSYST
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0273600 | RBH | 0.270595 | 0.172290 | 0.660818 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g17220 | RBH | 0.182032 | 0.151617 | 0.169216 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0273600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0010080 | RBH | 0.0 | 2.095953 | 0.369707 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0010200 | RBH | 0.041822 | 0.709604 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0010020 | RBH | 0.116790 | 1.636573 | 2.672996 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0009800 | RBH | 0.022784 | 0.056474 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0010220 | RBH | 5.486380 | 1.592026 | 7.105233 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0184100 | RBH | 0.0403555 | 0.0031255 | 0.169466 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0010690 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0180800 | RBH | 0.084773 | 0.0052395 | 2.473952 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0010170 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0010230 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0010170 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0010130 | RBH | 0.056728 | 0.375320 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0010020 | RBH | 0.0 | 1.310649 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G009990 | RBH | 0.049925 | 0.568324 | 0.169237 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0009540 | RBH | 0.748656 | 7.472680 | 0.247295 |
