Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_06g0025960 | OGI:06078100 | 15/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr06:28912809-28920887 | ||||||||
| Gene Symbol | CYP59A, OsCYP59a, OsCYP-14, OsCYP59-1 | ||||||||||
| DNA seq | atgtcggttctcatagtgaccagcgtgggggacatcgaggtggacctccacaccgacatgtgccccctcaccaccaagaacttcctcaagctctgcaagtaagcttttagtttacccgcacctagggcttgttctatgtgtgaattttcgcgggatcatctggctactagaggtaacgagggtctcgtggcgggtgggttagccttcaggaagcagttgagcgggcaattttggcgttgtagagcgggtgctactgggtctggattcgatgtgaagggtgcgtgtagtgtagtgtgttggattgattgattacagttgaagctgctgccataccagtgtgtcgtgaatcattgtgaatgctcttgttcccatgttacttcgagtttcgattgcgtttaacttgttagtgtagtgctgttaagttgatagcatcttacaagtgctgttggtagcacttgtctgtggcgctcctcatatgacaatctgtattaaccatctctgtacatgtctcttggatattttcaacgttattcacccagtgtttgcatgatttttctttttgttgcaacatggcgacatgcttcatcagattttgctgtaggactttttttttcttgcaacggttttgatgcttctgcctgtcatgtatttgttgcggccgtagcccatagtaggaaattgtggcatttgtagtggaaaattgtttcagcggagtggacaaataaactggagcagacaattgtttcagctagaacatgccattgttgcgattgtagcgagaaatcgtttcagctgcaacaaggaaattgcttcaattcttcttttggaattgttgctacgtgagtagaatatcattgctagctaagccaccaatatttatatctaatcgttgatttgatttgtgagggatgttgatattgtggtagacattttattttctttatgattagtgataaatgaaagcagctgtggtacaatttagaagagccagaagttgacttccgaagcaaaagattacggcctccgtggagtccatgaattggttgatttaatggttgcttatatagtagcgaggatcacttatttcagaaacgtctgacaatagctctcggattgaacatccgagcactagttgttatcattagtatttggttctagggatgaggtgggatgaaacaggatggttctacatttttgggatgaggtggaatagaattgtttcgtttagttgtttggttgagaatgggatgattcaatattttgtttggtttaagcgagatgggatggaatggtccaatccagagtttggtttggagaatagaattagattttctttttagaaaatggaataaacccggcctctacatccaattggatttacgcagccaagaataagataggattgactcaggtaacctgcaccttagactggtgagaataaacctttttttttaaatttcccttatttccttttccccttcttaatttttctctctcccttatcatctgtaggaatgagctttcctggctacagcttcttccttgtcttcctctctcttcattattttgttcacatccaaaactatttgttctccagattcctgagtggtgctatggctagtgagtggaggaagcggagtggatgacgccactttgctgcacaagccggcgactctcatgagcgcgtcaaggcagtgatccactagcggcatcaatggtcgagtgcaagaaaccttttaacctcatggaggtggtagcccactgcttctcagcttgaggagagtggtggctgctcgcagtctcgcagatgggcggtgaacaaatccagcgagaagctctcccccgcactgctgaacattcttgcatgagttcatctgggcaaaagagtggtatcatctcatcctgaatcttgttggaatattcgtcaaaatgaaactacctcgtcctgaaatgtttcgtcccatcccaagaacagaacacatgggctcatcccaggaccataaccattcgttctatcccacttgatctcaggaaccaaacacatagaggattgttctttgattcttagtgtcgttgtctgaactaaaattatgtaaatatgtttgtctacttatcttgcaaaagttaaatactgcaaaatagcaggctatgaaatatgactgagttgactacttatggcaattggagtaatcattctctcgctgttcctatgattttacttaccaggatgaagtattataacgggtgcctgttccacaagatagagaaggatttcttggcacaaactggggactcaactggaacaggagctggaggcgactctgtatacaagtaatcaattaatatagcgcaataggagcctctccttctgtttcctgtaaaaaaataatcaattgctcagatgtctcactgccaccgattgtcaaatacatgcctgaaaacggattcattttttttcctgtagattcctttatggtgaccaagcacgattttttgatgatgagatccatccggagcttaggcattctaaaatgggaactattgctatggcaagtgctggtgaaaattgcaacgcctcgcaggtgtgatacttagtccctaaacttcctaccgaacccaaatgttttgattaccagtaattagtccattttgatgtcctcactgctgtttttagcctttcgtttatgtttgtgtgacttattagttctacatcaccttgcgggatggcgtggactacctcgatgataaacacactgtgagtagcaccttactattattacattgacttagagattttttttcttgaaaaaccctactttatctgcagtgactcacaagtatatcttcatcaattgtaggtgtttggcatggttgctgaaggctttgacacgattacaaagattaatgaaacatatgttgatgataaagggagaccatttaaggatatcaggtaaaatacctttgaaaagtactaaactgcatagttagaacatgcttgccaatatttacttactttctggtctttctgttgtttctgctttatttccattgctgaccttctgcaaaatacttaatgaacaggattagacatacatatgtcttggatgacccttttgatgatcctcctcagctcagtaaacttattcctgagaattctcctgtagggaaaccacaggatgaggtaatatgagttctgctattgtgctcatgttggaaagacaataatcaaaattgactaatcagaatcacaggctgtcttacatttgtttaattcgttttaccttccacattgttgaaaactttataacaatttatttgggcacatacctgtttaagagtatgtatggattttagttgaggcagccactgggtgtacatgtaatttattttccctgttctgtctgtaccaaattatgctaaaagttcctatgcaatgtcctgctaatgtactatgttatatattttcttttcaccgtcaatgtacagattgcagaagagcgcttagaggataactgggtccctccagatgaaacagtggctcctgaagaactcgaggatactatccgctccaaagaagcacatacaaatgctgttattcttcagagcgtaagtcctggtgccaaattaaaatccaaaactacgcttattaattattaatcatgttataacttgtgactcataaaacttgtcttattcagttaggagatattccagacgctgagatcaaaccacaagacaatgttttatttgttcgtgaactcaacaaagtaacacaagttagtatcggctcttaattgattaactctgttcgccagttccactaatttttttgcttatccatcctgctttggtagtagcactacgtacagattcttatgtatagacatttcattcatttaatgctcctgtgattatatcacagattattttggacatcataaatatcggattgatatcccatagcttatgaaatattttttggtaagagaagctaaagggctaatattcattgttttgtaggatgaagatttatatacaattttttctcattttggctctgtgacgtcgtaagtgccttttcctaagctcaaataatttgcttatcttcctgttgcttctcttgttaatttttttaattgttccttgcagagctgaaataattcgtgactataagactggtgatagcttatgctttgcttttattggtaagtttcattcctcaaaagctggggtgcattgacatacttcgatcaagcattggatttagacagagtcctgctatttttctggagtaccctgagcccagtttgttcatcgaatacttgcctgagctatatcactagatttcgtaggcattcatcatccagttattcagttgtgttgtacatcagcctcttagatctgttatcctaacagggctccaactgaattacctatgcaataactgttggtgtttattgaaaggcatatactttagttgcagcatgtaaacacaccttttattttgttactatatacccgtgcattgcaaatggtcccatactactgaaaatgggctaggggctaatatatggatctaacataaagtgagaatatatttttatccaacaactattccctttttttcccgtctttcttagcgatttctttttgtgtgtaacaatttttctctagtgattttttttatggttccaaaaaaagaaggtttctgctactgttgctagattttctaaaatagtttttttttgtgcggaacctttttctccagcaattttttttccatgagcgagggggagggggtgggaaggaggacaactgtgcttttatagtagtagagatagctagtaatatacccatgcattggaacgggtccgtactactgaaaatgggctagggactattaatatggatttaacataaagtgagaattttttttatctaacaacttttcctttattttttctttatttcttagcgatttattttctttttgtgcagaacaattttgctctagcgattttttttctggttcaaaaaattaaacgatttctactactgttgctagatttcctaattttttttgtgtggaacctttttttctagcgatttttttccatgagcaagggggagggggtgggaaggaggatgagtgtgcttttatagtagtagagataaactcgcaaatggataaaatacatgaattgtcaaagaagattaatggtgttttctcctaaaaaacaaacctaatgatttaagaaaacaaactgagtgactccattgtacacttctgaggtattaaaccatagaagttaactgatagctcaactgttctcagggttacaatgtcagtgcaacatatttggtgcagactcaagtagccagtagatggcctaagaaagaatctctcttgttccacctggattaattggcaagatcagaatgttgttacaaaatactaaaaattatcttggtcttttgtagaatttgagaaaaaggaggcatgtgagcgcgcattcttcatggttagttgcctaaattcctgtttccagtggcagataaaatttcttctcttatataattatactctataattccttctgccacctactccctccgttttatattataagactttctagcattacccacattcatatatagattcattaacatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggaggaagtagcattctagcatattttttatatatttatttatgcttgactagtgaatgttacctagtttctgcattgacaattcagcagtctatgtttttgtaactatattagagtgttttcatgggagcatttgcttactcaatgatatgcttatagatggacaattgtttgattgatgatcgaagaatacgtgttgacttcagccaaagtgtttcaaaacagtggcgtcagttcagacaaagcaaaagtaatgcaaataaaggtaagataagtcatgtattcttatttccatggcttatcgttgcaattccagcttcttttttatttaagctaactgcaaaatcagtaggggaggtgctctactgttggttttttcctttaaggaaaagaactaaacaaatctattcctcatcaatattcttttcatctagacttactttggtggcactcaaatatgcatattctcatttcaaaccatagttgtagcattctgtgttcattagaaattcttgaatcctataaggaattttaccattttgtaccatggtgaagatgtcgagtcagtagctagtacctttaaatattttcaagtgaaaagatggcaacaatgttcccaataagttgggggcaaagaagaaagaacacgtcgatctgagtaagacttcaacatgtattttgtccttagcatttcttacttaaatctcttgcttgaacatgcatttgttctttggagttcatctgtaaataggagaagtgtgatatgaatacctcgtcttagtatatcagtgagtgtgaagatccccaaacagaatctaattgttacatgagtctttattttttcagtttttggcaaaactctgaagcacttgctgcatacagttcgtattttcatcatttgctaggcattctgatactcggattgttggtttctttgtatatgtaatatatgcgatccatgtagatagccctgcactgaacttaaccataaattcttccagaatcaacgggaccgtgttttgttctttacaacacgagctgggcaacggacttgaatgataattagatgctttaagaacattcctctactagagtaacttgtataactggtgactggtgagagttctcgtaacatctctgccagacaatattaagccatgaaatttctatttctctgtagaaaaagttgttttcaggaatacgcgagacgcacatttttatattaagaaggaataaatgaaattacaggggggccaaacaatttaaaaaagaaggggacagggtacaggtgtgggggggaaacagaaatcctaatctcctaaggagtttggcgacccgtgaacaaatgaaggaactaccatggccggtatggctgccctagccatccgccaaactgtagaaaaagttgtgatttatgaaatgatttttgacaagcaacatctcagtctaggttaaccacatcgaacccattgatctctaggtactaggaattacctcagtatgttcattgccgagtttaacattctcaactaggaccctgaattctggtattaagtcgagttagttgtgagaccttatgcttattttatcatgtgggagtttttaattcctgcatagttgattgcttctaatgtatttttttgaattgctgtgcaacaaaatgtccttttaatctcttccacaaacatactttaaagtgaaaaatacatgatgcatttctttctctttgcagatgggtgcttcaagtgtggcgcacttgatctcatagccagagactgtgaccagagggctgagcagaaaaacaaagggccaaattatatcctgaaagacgaaaacactcagcgcagtgggaacaagcgtcgaaggtgattttcccatccgccatcactcatattttctgattgtttcgccttttgataatatgttattattattttgtagctacgatcttgtctttgaagatggtgaaaactataatggtcagcaagatctccgaagcgctgaccgaagaaagatccataagatagatgatcgaagatcagggttgccacctcggggtgaccgtgataggattagccgggagagaacgcacattgatgagaatgataaagaaggtaatagggaccgagggaatcagaagcatgaggactacaaccgttactgtaaacctggtgaacgaagctccagtagacatgatgatcgtggctacagcaagcacgagagcagaagcaaatatagggatggcgatgacgattacagacgacaatcaggaggcagtcgatatggcagggataagtgcgatggtgaacgacgctacagaggagatgatgaccatggaaggagcaaccgccacacgagatga
More
|
||||||||||
| CDS seq | atgtcggttctcatagtgaccagcgtgggggacatcgaggtggacctccacaccgacatgtgccccctcaccaccaagaacttcctcaagctctgcaaaggtaacgagggtctcgtggcgggtgggttagccttcaggaagcagttgagcgggcaattttggcgttgtagagcgggtgctactgggtctggattcgatgtgaagggaatgagctttcctggctacagcttcttccttgtcttcctctctcttcattattttgttcacatccaaaactatttgttctccagattcctgagtggtgctatggctacacgattttttgatgatgagatccatccggagcttaggcattctaaaatgggaactattgctatggcaagtgctggtgaaaattgcaacgcctcgcagttctacatcaccttgcgggatggcgtggactacctcgatgataaacacactgtgtttggcatggttgctgaaggctttgacacgattacaaagattaatgaaacatatgttgatgataaagggagaccatttaaggatatcaggattagacatacatatgtcttggatgacccttttgatgatcctcctcagctcagtaaacttattcctgagaattctcctgtagggaaaccacaggatgagattgcagaagagcgcttagaggataactgggtccctccagatgaaacagtggctcctgaagaactcgaggatactatccgctccaaagaagcacatacaaatgctgttattcttcagagcttaggagatattccagacgctgagatcaaaccacaagacaatgttttatttgttcgtgaactcaacaaagtaacacaagatgaagatttatatacaattttttctcattttggctctgtgacgtcagctgaaataattcgtgactataagactggtgatagcttatgctttgcttttattgatgggtgcttcaagtgtggcgcacttgatctcatagccagagactgtgaccagagggctgagcagaaaaacaaagggccaaattatatcctgaaagacgaaaacactcagcgcagtgggaacaagcgtcgaagctacgatcttgtctttgaagatggtgaaaactataatggtcagcaagatctccgaagcgctgaccgaagaaagatccataagatagatgatcgaagatcagggttgccacctcggggtgaccgtgataggattagccgggagagaacgcacattgatgagaatgataaagaaggtaatagggaccgagggaatcagaagcatgaggactacaaccgttactgtaaacctggtgaacgaagctccagtagacatgatgatcgtggctacagcaagcacgagagcagaagcaaatatagggatggcgatgacgattacagacgacaatcaggaggcagtcgatatggcagggataagtgcgatggtgaacgacgctacagaggagatgatgaccatggaaggagcaaccgccacacgagatga
More
|
||||||||||
| Protein seq | MSVLIVTSVGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRKQLSGQFWRCRAGATGSGFDVKGMSFPGYSFFLVFLSLHYFVHIQNYLFSRFLSGAMATRFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKINETYVDDKGRPFKDIRIRHTYVLDDPFDDPPQLSKLIPENSPVGKPQDEIAEERLEDNWVPPDETVAPEELEDTIRSKEAHTNAVILQSLGDIPDAEIKPQDNVLFVRELNKVTQDEDLYTIFSHFGSVTSAEIIRDYKTGDSLCFAFIDGCFKCGALDLIARDCDQRAEQKNKGPNYILKDENTQRSGNKRRSYDLVFEDGENYNGQQDLRSADRRKIHKIDDRRSGLPPRGDRDRISRERTHIDENDKEGNRDRGNQKHEDYNRYCKPGERSSSRHDDRGYSKHESRSKYRDGDDDYRRQSGGSRYGRDKCDGERRYRGDDDHGRSNRHTR |
||||||||||
| Function | Peptidyl-prolyl cis-trans isomerase CYP59 [UniProtKB/Swiss-Prot:Q6Q151] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_06g0025960 | OsPr106_06g0025960.01 | Chr06 | 28912809 | 28920887 | + | NAM | ||
| CDS seq | atgtcggttctcatagtgaccagcgtgggggacatcgaggtggacctccacaccgacatgtgccccctcaccaccaagaacttcctcaagctctgcaaaggtaacgagggtctcgtggcgggtgggttagccttcaggaagcagttgagcgggcaattttggcgttgtagagcgggtgctactgggtctggattcgatgtgaagggaatgagctttcctggctacagcttcttccttgtcttcctctctcttcattattttgttcacatccaaaactatttgttctccagattcctgagtggtgctatggctacacgattttttgatgatgagatccatccggagcttaggcattctaaaatgggaactattgctatggcaagtgctggtgaaaattgcaacgcctcgcagttctacatcaccttgcgggatggcgtggactacctcgatgataaacacactgtgtttggcatggttgctgaaggctttgacacgattacaaagattaatgaaacatatgttgatgataaagggagaccatttaaggatatcaggattagacatacatatgtcttggatgacccttttgatgatcctcctcagctcagtaaacttattcctgagaattctcctgtagggaaaccacaggatgagattgcagaagagcgcttagaggataactgggtccctccagatgaaacagtggctcctgaagaactcgaggatactatccgctccaaagaagcacatacaaatgctgttattcttcagagcttaggagatattccagacgctgagatcaaaccacaagacaatgttttatttgttcgtgaactcaacaaagtaacacaagatgaagatttatatacaattttttctcattttggctctgtgacgtcagctgaaataattcgtgactataagactggtgatagcttatgctttgcttttattgatgggtgcttcaagtgtggcgcacttgatctcatagccagagactgtgaccagagggctgagcagaaaaacaaagggccaaattatatcctgaaagacgaaaacactcagcgcagtgggaacaagcgtcgaagctacgatcttgtctttgaagatggtgaaaactataatggtcagcaagatctccgaagcgctgaccgaagaaagatccataagatagatgatcgaagatcagggttgccacctcggggtgaccgtgataggattagccgggagagaacgcacattgatgagaatgataaagaaggtaatagggaccgagggaatcagaagcatgaggactacaaccgttactgtaaacctggtgaacgaagctccagtagacatgatgatcgtggctacagcaagcacgagagcagaagcaaatatagggatggcgatgacgattacagacgacaatcaggaggcagtcgatatggcagggataagtgcgatggtgaacgacgctacagaggagatgatgaccatggaaggagcaaccgccacacgagatga
More
|
|||||||
| Protein seq | MSVLIVTSVGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRKQLSGQFWRCRAGATGSGFDVKGMSFPGYSFFLVFLSLHYFVHIQNYLFSRFLSGAMATRFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKINETYVDDKGRPFKDIRIRHTYVLDDPFDDPPQLSKLIPENSPVGKPQDEIAEERLEDNWVPPDETVAPEELEDTIRSKEAHTNAVILQSLGDIPDAEIKPQDNVLFVRELNKVTQDEDLYTIFSHFGSVTSAEIIRDYKTGDSLCFAFIDGCFKCGALDLIARDCDQRAEQKNKGPNYILKDENTQRSGNKRRSYDLVFEDGENYNGQQDLRSADRRKIHKIDDRRSGLPPRGDRDRISRERTHIDENDKEGNRDRGNQKHEDYNRYCKPGERSSSRHDDRGYSKHESRSKYRDGDDDYRRQSGGSRYGRDKCDGERRYRGDDDHGRSNRHTR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 3.703271 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0670400 | RBH | 0.355579 | 0.000000 | 0.155917 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g45900 | RBH | 0.304776 | 0.000000 | 0.035062 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0670400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0025890 | RBH | 0.052011 | 0.0 | 2.164878 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0025700 | RBH | 0.146766 | 0.0 | 0.643346 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0025880 | RBH | 0.122441 | 0.000000 | 2.016250 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0025480 | RBH | 0.074007 | 0.039090 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0025970 | RBH | 8.240622 | 13.306072 | 18.167582 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0435900 | SBH | 0.7388315 | 3.366662 | 3.022677 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0025430 | RBH | 0.000000 | 0.0 | 0.571001 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0418900 | SBH | 9.464071 | 17.5895215 | 21.315361 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0025840 | RBH | 0.043178 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0025840 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0025510 | RBH | 0.000000 | 9.137845 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0026110 | RBH | 0.072545 | 0.485218 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0025750 | RBH | 0.074344 | 0.906762 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G025590 | RBH | 0.080155 | 0.682076 | 0.437312 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0025680 | SBH | 0.000000 | 0.0 | 0.537269 |
