Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_06g0017760 | OGI:06052790 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr06:20019964-20021015 | ||||||||
| Gene Symbol | prx85 | ||||||||||
| DNA seq | atggcgttgtccaagggtctcttcgtcgcttcgtttacgctatttctcctcgtggctctggcgttcgccgacgagagcaggccggagctctcaccggcgtactacaagaagacgtgccccaacctggagaacgccgtgcgcacggtgatgtcgcagaggatggacatggcgccggccatcctccgcctcttcttccacgactgcttcgtcaacgtaagtagtatatcactctctcatagtaggtaggaggacgccattacgagtgcttttatctcacaatattcgatggcatgcagggatgtgatgcctctgttcttcttgaccggacggactccatggagagagagaaagacgccgagccggccaacacctcgctcgccggattcgacgtcatcgacgagatcaagtcggtgctcgagcacgactgcccggccaccgtctcctgcgccgacatcctcgggctcgcctcccgcgacgccgtcgccctcctcggcgggcccagctggagcgtgccgctcggccgcatggactcgcgccgagccagcaaagacgacgccgagagcgtcgacaacctcccgaacccgaacagcgatctcggcgagctcctcagggtgttcgagacgcacggcctcgacgcccgcgacctcaccgcgctctccggcgcgcacaccgtcggcaaggcccacagctgcgacaactacagggaccgcatctacggcgccaacaacgacaacatcgacccctccttcgccgcgctccgccggcggtcgtgcgagcagggcggcggcgaggcgccgttcgacgagcagacgccgatgcggttcgacaacaagtacttccaggacttgctccagcggcgcggcctcctcacctccgaccaggagctctacacccatggcggggaggtaagcgacctggtggagatgtacgcgacgaaccgcgaggcgttcttcgcggacttcgcgagggcgatggtgaagatggggaacatacgcccgccgcagtggatgccactggaggtgaggctcaactgcaggatggtcaacaattga
More
|
||||||||||
| CDS seq | atggcgttgtccaagggtctcttcgtcgcttcgtttacgctatttctcctcgtggctctggcgttcgccgacgagagcaggccggagctctcaccggcgtactacaagaagacgtgccccaacctggagaacgccgtgcgcacggtgatgtcgcagaggatggacatggcgccggccatcctccgcctcttcttccacgactgcttcgtcaacggcggcggcgaggcgccgttcgacgagcagacgccgatgcggttcgacaacaagtacttccaggacttgctccagcggcgcggcctcctcacctccgaccaggagctctacacccatggcggggaggtaagcgacctggtggagatgtacgcgacgaaccgcgaggcgttcttcgcggacttcgcgagggcgatggtgaagatggggaacatacgcccgccgcagtggatgccactggaggtgaggctcaactgcaggatggtcaacaattga
More
|
||||||||||
| Protein seq | MALSKGLFVASFTLFLLVALAFADESRPELSPAYYKKTCPNLENAVRTVMSQRMDMAPAILRLFFHDCFVNGGGEAPFDEQTPMRFDNKYFQDLLQRRGLLTSDQELYTHGGEVSDLVEMYATNREAFFADFARAMVKMGNIRPPQWMPLEVRLNCRMVNN |
||||||||||
| Function | Peroxidase (Fragment) [UniProtKB/Swiss-Prot:P16147] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_06g0017760 | OsPr106_06g0017760.01 | Chr06 | 20019964 | 20021015 | + | NAM | ||
| CDS seq | atggcgttgtccaagggtctcttcgtcgcttcgtttacgctatttctcctcgtggctctggcgttcgccgacgagagcaggccggagctctcaccggcgtactacaagaagacgtgccccaacctggagaacgccgtgcgcacggtgatgtcgcagaggatggacatggcgccggccatcctccgcctcttcttccacgactgcttcgtcaacggcggcggcgaggcgccgttcgacgagcagacgccgatgcggttcgacaacaagtacttccaggacttgctccagcggcgcggcctcctcacctccgaccaggagctctacacccatggcggggaggtaagcgacctggtggagatgtacgcgacgaaccgcgaggcgttcttcgcggacttcgcgagggcgatggtgaagatggggaacatacgcccgccgcagtggatgccactggaggtgaggctcaactgcaggatggtcaacaattga
More
|
|||||||
| Protein seq | MALSKGLFVASFTLFLLVALAFADESRPELSPAYYKKTCPNLENAVRTVMSQRMDMAPAILRLFFHDCFVNGGGEAPFDEQTPMRFDNKYFQDLLQRRGLLTSDQELYTHGGEVSDLVEMYATNREAFFADFARAMVKMGNIRPPQWMPLEVRLNCRMVNN |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0521400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g32960 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0521400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0017780 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0017600 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0017710 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0017610 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0017780 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0297400 | SBH | 0.006482 | 13.8306715 | 0.0413505 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0017290 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0272900 | SBH | 0.0140095 | 22.333703 | 0.0099385 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0017640 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0017570 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0017260 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0017980 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0017410 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G017410 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0017590 | RBH | 0.0 | 0.0 | 0.0 |
