Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_06g0005090 OGI:06010430 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr06:3439588-3449397
Gene Symbol -
DNA seq

atggcttgtgcgagcgcgggaaaacgtgatatgatgaatcagccgggacatggtggtgatgtgcccgtggccaagcggcggcggtgcgtcgaacccaccggcgccgccgcggccggcatcccggaagacattgtggaggaaatcctcctccgcctccctgtcaagtccatcctgcggttcagatccgtgtgcaagtcgtggcgcgccatggtcgccgacccgcgcttcgtgcgcctccagctacaccactccaccacggcggcgcgccattacccaccgtccatgctcatcctggcagactggtgtttgccagagcaacggaggggagcgatcgacttctttagctatccgggccatggcgtcgccgcggactccgcgcttgggatgacatggtcctcgaagtcgaccgtcgccgccgccgcagacgggtacgctgcggctgatggggacgccgtggacgtcgggaacgccgacgacaacttggacgccgccgtcgacgacgggaacgccgccgcggactgggacgacgacgacgactgggacatcgacgttggcgccatcggctgggccttgcatctgcactgcaacgggctcgtgtatagttggccatatgggccgcccggcacggtacggcccaggcacggccgggcctgggccgaggtcagttgggccggcacggcttgacgaacaagccgtgccgtgccgtaccagcccacgggctacaaccacggcctaggcacggcccaagtagcctcgggccgtgccgggctggcccgacggcccggctagcccattgtgcccgtgccggcctaggcacgccctggcaaaaaaaccccttcaaaggttcaattcaacacaacaaattgacataacacatcaaattcatgaaattcacatgtaattcatcaaataagtcaaagaatcacaaacaattcatcaagtcaccagttcatcaaatcatgcatacatcacgtcacagatttacaagcacagatttacaaacaaatgaacaattcttcaagtcaccaattcatcaagtgtaacgctccgcttttcgtgaggcgttaaaaactaattcggcaaaaatcctaattgcgaaaatttcgttctttgagtgttgagtctaagttgtgccaaggatctcaatttaatcccgttattCcctctcatcgaaatcaaaaatcctcaacctcgaaattcctcttccgactcaagtctccaaatcaaactctgaaattctatccctctctttgaatcatcaccaaatacttccccagatccaaaatatccaaaaccccatcttgaatcctccgtctactccttcctctcatcgagatcccaatttcaaaatctaagtcaaattccaagttcaaattctcttcgaatcaatctcctccgaaaaagtctattttgcctccttctaaatttggatgggcctgatccccctcccctcggcccatctcctctctcagccgttcctcctctcccctctctccgcacgtgcgttgcgcgTgcGccgcgctcgagagaagagagcgcccactctcttctcacccacgctctctctctctctccgtttctctctctctcccgtaaaagcttcccccaccggcgccgatttcccgccgccgccgttcgaaatccgaccgcgccctcgcatccacgcgcgcgctcgtgcgtggccgaccgcccggtcgccgccgcgtcggccctgccgcgcctacgcctcccggccccgcctgcccgccgcccaaaacggaagggaagagttcccctttccaccgccctcttcgcctttttccccctcgggctcaaccgctcgctctctcgccctcgtccgcttgcgctcggaggcagagccgctgacggcagccgccagctcgccgcccccaCcCTTGACCCAGCGCCAGCTCGCCCCGAGCCAGCCGGCGCTGCTCCTCCCGCTCCCGCGGTTCAAATTCCGCCGCACGATCCACCGCCTTCGCCGCCCAACACATCCACGCCGTCGCCGGCCTCCGTCTCGCCCCCTCTCCCTTTCCTTTATCCCGAAACAGCAAGAACAGAGCTCCCTTTTCCccccacctttttccttttgcccgacaccgccggcgtcatcacctgtcgccgccttggctgcacgcgtcgatgaccgcccgctcgctctccttgaccgccaatgtcggttccccctcccaaactgcctcttttccatctataaagcccgggccgagcctccctatctcattctctcacggcatctctcctccaccaccgccgcgccttgttgccgccttgcagctgccgaccctcccttcgccgtcgcgcgtgctggtgaagccggcgtgagcgcgaggagccgaagaggactccggccacccttcttcttccccttccctggcccaaggccggagaactcgccccgcgccgtcgaccgcccatcactgcccgcccggctcggtagtgcctcctcccgtttcccttcctcgctctccctcgccccctctagtctgcgtgatagctcggtggcactcccgaacacgcgtagatgccgcccctagacccgccgccgcccggcatggcctcgccgccgttgccgcccgctcccggaggccgccgctcgtcgccagccctccttggtgctcttccgccccatccaacgccggaagcggactccttgaaccccggagatgcttccaccgcctcgaattgaatcctcgtcgcccctccgccgtttgccctttttctcaccgccggcgagggccgccgcgattcgtcgtcgccggtcttccttccgtgaatccgagccggtggcgcaccttatctcctccgtctcattattccggtgtgccccctccctctcgaatcgtcgcgacaagctccggtgaactcggccgccgtccgccgtccatctcggcctccccttcttCctcctcccGccggcccgcgtggctaccacgtaggcgccacgtcggagtcacctcggccgcgaccgggtcagcacgaccagcctgccgcctccccctccctcaaccggtgcgcgcggtccacggagagccctatggctgcgcgtgggcccgccgcatctcggtccatccggcgcaccgcccgtgcgccatcttcaccaaaccctagcgccgcccccgcgtgaacccattcctccatgaacccagccgccgacaggtgggcccgtcccgggacccgcatggtggaccgcggtccacccGgtcggtctcctccccctcccacgccccattgggccgccctcctcgcggccgtgccggcccattaggctcgcccgagctgcacaagtccctcgggccgcgccaatgccacccgagacaagtctgattgacatccctccatccttttctttttccagggatttaataaatcctttttcccttgtcccataaatcaattccttattccaaaattccataaaccatttcctttggtcccgcatgacagtgactgttaataatattcttgggaatattatttctacaaaCcccataaaccatttctcgtattccagaaaattccgataaatcatttccttgaccagaaaatccaaattaaacttccaaaattcatatcttcccaaccgctcttccgtttgactccgttcaacttccagtaattccgtaaaatcgagatctatttaatggcactaataattagtctaaataggatctttcttttggtcttttgtttaggttttcaattgtttgcgtatagttgcggttatcggattttcgtcgatcgcgggttttctcgaagattcgtgaagcttcgtgaagaccttgagcaaggcaagtcaccctttgatcaattgctcctataattgaaaagtcattattattttgtttgcaacttgcattattagaatcacacacttaacttgcttggcctcggtttgcatgccaaatcgacggacctacccagtagtcgcactaatttccgtaggtcatactaccctgattccttgtcgctccacccttgtggtacctcggtattcgtgctctctgagcgcgtataccaaatatcccacatacaccgttgcttgtcgaaaacttgggaaatgggtttgtgaagccttcaaaacccgacatgtggtgtcggtgtgtttgaaaataaaatgaattgtgaaaactcgcgatgcgggggttgtgcctatgtggtattgtcccgtattcgcatataaggaccgattcctgtgggaaactcatcgaacataatcaaagtgcaaccacaaggtggaatgggacaccctggttaagtaactagacggttcagggaaacctcgcatgccaatagttgggaacgccggggcggggtcggacaaaccgggttcctggtaaggcaaggacgagaagcttgctcacttaccgatcaaggtggttggaatttgatttgtgcAcgcctaaaatggcctatgtttatgtgaggatttgatccttccatgtggcatgaggtaaccctgggtcggctggggaaaggctttgttgcgaacctccgataccgacgggtgttcggaataagttcgtatcttgtgggtaaagtgtacccctctgcagaggttaactaactgttcgaacagccgtgcccacggtcatgggcggatgtgaggtggttcccgttgcgtagatttgtttgcctgtgctttgtgaaaagttgttgtggtgtgggaatcgtaaccagaatcagcctatgtggcagatggatgacctgagtggtcagaaacgaatctgtgtgattcgggatgtctgcgggcatcatagactaggcttcccgagtggaagcggattgttgtgctgctgggcagctggactctgggagtccgagaaaatgaaaaaggctctgggagccgattaatcaagtggaatggctctgggagccgagaagtaatgatctgacccgggaggtcggtacattactaaatgagttgttgaaaaacatctcttaaagtcgaatcgagacgcaagcctcttttcggcccaaacatagaaagaaataaatcacttagtgatttcaaaatgatttcaaacaaaagatttgcaaaacaaccttgcctctcttccaagctagcattaaacacctaaattcccgtgacttgctgagtacgaaagtactcacccttgctctatataaatatatataaatagttcctccgccctgaagagaagataaagtgaagtgaagattagggtttcgtcctggttcccagccgtcgcctgtggtgttgggtgttagaccgttggtttccgctgctgctgctgctgttggtgtttcctcgtccgcgtcgtcggttgtattctcgggctgtctgagctgcaacctaagttaaggtaaataagtcctctatttattttaaggattgctatgattcatatttgtcaccgtgggtaccagcactatgtcctgggactggtaccgagatcgcggtttcgtaggaagcggttcgcgccgttttccctacgacacgctcctgtcaggtgccgttgtacggcggtatcagattggggtatgacatcaagtcacagtctcacagatttacaatcagttcaaatcaattcatcaaatgcatacatcaagtcatctactattttccatcaagtccatcttagaattacaaacctcagaaagttagaatataaaaggggtttatataagctgtgattgtgcaatggctgcctcattaaaaacctttctaggtaaaaactcacacctcgtgagaaaaccctagaaaggaaaagagtacagcccatagctaaaatgttcatatcaattacaatcatccagttcaagggtttacatcaatttcatcatcaagatacatattctcataagcattttgaagctccacattctcagtagtatgctgactttttgcatctgctagctcccagtccttgatcactgccagaatttccaccagcctagggtttagacgccgccgacggtcctcgatgatcctgccagttaagctaaaagtagactcggacgatatagtagaaacaagaacagtcataacatctttagctaagattgaaagaacaggataagttagtttgtgctgttgccaccaactaaggatattgaagtcattatcatattggttgacagtgtcactgtcaagatatgcagacagttcagaaggattgagattagcagttgaagaagctgcctgaagcaaagcagtagcagatgtcatcctggataatgaaccagcaccaagcccagcacctggactggcatcagcattaccagcaccaagcccagcacctggactggcaccagcattaccagcacctggactggcacctgcattaccagcaccaagcccagcagcaacaacagaaccaaaaatcttcccccatgcagtccttttcttaccagtggaagggcctggaatagtggaactatgcaatctaacagaaccaaactttctttcatacttagcaaaagtatcagacaatgaagctctaacagttgttaaataagcagagtaatcatcactaatgagttgagccataatctgaagcactttactaaaCcccctaatcttggccctagggtccaagataaatgcaaatgaataaagaattggaattttagaccagtagttcataaacttagttttcatgggaccaacaacatttgcaaggttttgaacattgccatatgtgtttagatgtccagcaatctctaaaatgtgatgcatgattaatggagatgttggataataaacaccagacaaaacaacagttgaatcataaaattgttcaaggaaacacaaaacagattcagcacatgcccaatgtaagtctgtgagtaatggatggtcattaacaaaaggatgttgtgtactaataaatactgtgaatggttccctatgtggtatgagatgcttaagcattagataagttgaattccatctaacatccatgtccaaaccaaacatacgaggacgataacccgcagcaatgcaaacatttttatatgtagcaatgcgctgattagatgcattcaagaatgaaatggcagctctaatgtcatttagcatgggcttgaacttgtcaagtccagccttaacaatcaaattgatgatatgacatgcacagcgttgatgcaaaaataaatcaccaatataaccagacagagcaggagtaagggtgtccatagctttagaattagcagaagcattgtctaatgtaatagagaaaaccttatcagtaataccatattcttcagcaacagcaatcacacgctcagcaatattagcaccagtatgtgactcatcaataagcctaagacccaagaccctcttttctaattgccaataagaactaacaaagtgagctacaacactcaaataatcttccttagcatgaccagaccatatatcagatgtcaaagcaatagagctagcagaattgagacgatcaataataacagaacgacgatccttaaacaacttataaaaatctctggtagtagtttgtctagagacaggaacaaatctagggttatgagcagccttaatatagttcacaaaagcaggagattgaccaaaactgattggaagatcctctctagcaatcaatctacacaattcaaacctagcaacttcaggactatattcccatggaataacagaaccatctgcactaaatctaagcatggactgaggcaaagcattagacccaagctttctaggtttgcatgacttaatatgcctaagcaaatgtccagtgccagcagaagaacgagcactcaaagttttatgacagtaattgcatttagcagagactcgaaccctattaccattggtcgtttcataaagttcctcaaagtcatcccataccttggaggttttggtcttcttgttggtacaagtcgcactagagccagtcggcgtcccattgccactgtcgtcgaccggcgggtcgtcgtcattgacattcacatggatcaggatgtcggaggtattgccgaacacctccacacgatcctcctccacatcatcatcgtcatcaccgcgcatccccatagtcctcaactcgtagttgacagaggtaggatcgtcgtccatcgcaggcactctggtccctcaacggcggctgccgctaagcaacgggcttgcgacctgcaagcagccaacaacactcaaggttagggtcggaaatggagaaaaaaaaaagaaaaacgatggttccatgcttgtacctgcacagccggagcaccggagttgccgttgaagacgataggctcagagatctacgagaagaccaagggatctggcgaagaagaacaaaagggaaagagacgaagaggaaggctggatctggaagagtggaaggacaatgactcaggcgaccatgcgtggccggtggcccccatcctcatgcgcccctcatgcgagtcaggcgaggcatcgatcggagacgaagaggaaggctggatctgtaagagtgaaagggaggcgactcggtgagtctcaccggtgcgcgcctgaggccctgagtgagtgagcggcggatggtggaggaggagatctggtgggcggtggagcgtcggaggcggatcggcggaggcggttgagcggtggcggctagggttagggttaggcggagaggcggagaggcggagagcgagaggcgagaggggactggggaggggaggggcggcgctcgctggcttatatatgcgggcgcacgcggcgcggcctggctgtctgttgggctgggccgtgctcgtgcctaccgttggtacgggccgtggtcgtgccgaccgttgggccgtgccgtgccgggccggcccatcgtgccgacctcggtccgtgccgtgccgggccggcccaccgtgcccagccataggcccaggcacggcccaatagtcgtgccGggccggcatgggcccgattgctaccgggccatgccgtgcttgggccgggccaaattcccgtgccatgggccgggccatcgggcctcgggccatatggccaactataggctcgtgttgctgcgctcgatgcgcaagtactccactaagatgttagtttgcaacccggcgaccaaggagcttgccgagctaccggcctgtgcgccggactacttcggagtgcaagcggtaggcttctacgccgaccaatctactggcaagacgaaggtggtccactgcttcatccgccactgcgacaagacctacacggactacagcgtcggatgcgaggttttgtccctcggctcgccggcgtggaggccgctcgccgacccaccctacctcgtcaagaccaaaacgtcgccgtccaccggcagctgcaccaccccagggattgtacgcttcgacatgtgcagcgaggagttcgccagtttcccgtgcccaccgttcatggagcggcagaagatgtctgacatcgcttgtggggaactgacggagctgggtggcaagctgtgctatgtgcatgctcccgccgacgatagagttgagctctggacagcttccgccgccgacggaggcggcagcaggccacggtggtcgctgcaatgcaccgtcgtgctaccgcactcctttcacaccttcttccagtttacctacgattaccaaggaggcatatgtttctacgtggattacgccatgatttaccggtacgacgtcgaacgcagagttgtggaacgagtggtggacatgctcgaggagatgacctacttcgacagttcaaggtgcaagctgtaccgctgtgatggggattggatgcaccacgccattcagtacagtgagagcttggtatccatccaagcaaattaa

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CDS seq

atggcttgtgcgagcgcgggaaaacgtgatatgatgaatcagccgggacatggtggtgatgtgcccgtggccaagcggcggcggtgcgtcgaacccaccggcgccgccgcggccggcatcccggaagacattgtggaggaaatcctcctccgcctccctgtcaagtccatcctgcggttcagatccgtgtgcaagtcgtggcgcgccatggtcgccgacccgcgcttcgtgcgcctccagctacaccactccaccacggcggcgcgccattacccaccgtccatgctcatcctggcagactggtgtttgccagagcaacggaggggagcgatcgacttctttagctatccgggccatggcgtcgccgcggactccgcgcttgggatgacatggtcctcgaagtcgaccgtcgccgccgccgcagacgggtacgctgcggctgatggggacgccgtggacgtcgggaacgccgacgacaacttggacgccgccgagcttgccgagctaccggcctgtgcgccggactacttcggagtgcaagcggtaggcttctacgccgaccaatctactggcaagacgaaggtggtccactgcttcatccgccactgcgacaagacctacacggactacagcgtcggatgcgaggttttgtccctcggctcgccggcgtggaggccgctcgccgacccaccctacctcgtcaagaccaaaacgtcgccgtccaccggcagctgcaccaccccagggattgtacgcttcgacatgtgcagcgaggagttcgccagtttcccgtgcccaccgttcatggagcggcagaagatgtctgacatcgcttgtggggaactgacggagctgggtggcaagctgtgctatgtgcatgctcccgccgacgatagagttgagctctggacagcttccgccgccgacggaggcggcagcaggccacggtggtcgctgcaatgcaccgtcgtgctaccgcactcctttcacaccttcttccagtttacctacgattaccaaggaggcatatgtttctacgtggattacgccatgatttaccggtacgacgtcgaacgcagagttgtggaacgagtggtggacatgctcgaggagatgacctacttcgacagttcaaggtgcaagctgtaccgctgtgatggggattggatgcaccacgccattcagtacagtgagagcttggtatccatccaagcaaattaa

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Protein seq

MACASAGKRDMMNQPGHGGDVPVAKRRRCVEPTGAAAAGIPEDIVEEILLRLPVKSILRFRSVCKSWRAMVADPRFVRLQLHHSTTAARHYPPSMLILADWCLPEQRRGAIDFFSYPGHGVAADSALGMTWSSKSTVAAAADGYAAADGDAVDVGNADDNLDAAELAELPACAPDYFGVQAVGFYADQSTGKTKVVHCFIRHCDKTYTDYSVGCEVLSLGSPAWRPLADPPYLVKTKTSPSTGSCTTPGIVRFDMCSEEFASFPCPPFMERQKMSDIACGELTELGGKLCYVHAPADDRVELWTASAADGGGSRPRWSLQCTVVLPHSFHTFFQFTYDYQGGICFYVDYAMIYRYDVERRVVERVVDMLEEMTYFDSSRCKLYRCDGDWMHHAIQYSESLVSIQAN

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_06g0005090 OsPr106_06g0005090.01 Chr06 3439588 3449397 + NAM
CDS seq

atggcttgtgcgagcgcgggaaaacgtgatatgatgaatcagccgggacatggtggtgatgtgcccgtggccaagcggcggcggtgcgtcgaacccaccggcgccgccgcggccggcatcccggaagacattgtggaggaaatcctcctccgcctccctgtcaagtccatcctgcggttcagatccgtgtgcaagtcgtggcgcgccatggtcgccgacccgcgcttcgtgcgcctccagctacaccactccaccacggcggcgcgccattacccaccgtccatgctcatcctggcagactggtgtttgccagagcaacggaggggagcgatcgacttctttagctatccgggccatggcgtcgccgcggactccgcgcttgggatgacatggtcctcgaagtcgaccgtcgccgccgccgcagacgggtacgctgcggctgatggggacgccgtggacgtcgggaacgccgacgacaacttggacgccgccgagcttgccgagctaccggcctgtgcgccggactacttcggagtgcaagcggtaggcttctacgccgaccaatctactggcaagacgaaggtggtccactgcttcatccgccactgcgacaagacctacacggactacagcgtcggatgcgaggttttgtccctcggctcgccggcgtggaggccgctcgccgacccaccctacctcgtcaagaccaaaacgtcgccgtccaccggcagctgcaccaccccagggattgtacgcttcgacatgtgcagcgaggagttcgccagtttcccgtgcccaccgttcatggagcggcagaagatgtctgacatcgcttgtggggaactgacggagctgggtggcaagctgtgctatgtgcatgctcccgccgacgatagagttgagctctggacagcttccgccgccgacggaggcggcagcaggccacggtggtcgctgcaatgcaccgtcgtgctaccgcactcctttcacaccttcttccagtttacctacgattaccaaggaggcatatgtttctacgtggattacgccatgatttaccggtacgacgtcgaacgcagagttgtggaacgagtggtggacatgctcgaggagatgacctacttcgacagttcaaggtgcaagctgtaccgctgtgatggggattggatgcaccacgccattcagtacagtgagagcttggtatccatccaagcaaattaa

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Protein seq

MACASAGKRDMMNQPGHGGDVPVAKRRRCVEPTGAAAAGIPEDIVEEILLRLPVKSILRFRSVCKSWRAMVADPRFVRLQLHHSTTAARHYPPSMLILADWCLPEQRRGAIDFFSYPGHGVAADSALGMTWSSKSTVAAAADGYAAADGDAVDVGNADDNLDAAELAELPACAPDYFGVQAVGFYADQSTGKTKVVHCFIRHCDKTYTDYSVGCEVLSLGSPAWRPLADPPYLVKTKTSPSTGSCTTPGIVRFDMCSEEFASFPCPPFMERQKMSDIACGELTELGGKLCYVHAPADDRVELWTASAADGGGSRPRWSLQCTVVLPHSFHTFFQFTYDYQGGICFYVDYAMIYRYDVERRVVERVVDMLEEMTYFDSSRCKLYRCDGDWMHHAIQYSESLVSIQAN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0170866 SBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g07450 RBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os06g0170866 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0005210 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0005080 RBH 0.0 0.000000 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0004990 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0005210 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0005060 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0063000 RBH 0.0160035 0 0.0086735
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0004970 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0062300 SBH 0 0 0.002757
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0005280 SBH 0.0 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0005120 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0005140 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0005150 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0004920 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G004790 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0005080 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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