Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_04g0001080 | OGI:04004540 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr04:1382185-1385921 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaaggtgtagacactgcgagagacttcaaaaatttctcattgatccgcttcagccgagacagtgcatcgtgcatactgatgcgcgagccaggggactcccgaacgcaacataatgcaacatccaccatgggaactaaaagagtctccaacagcagtttcgagtccacagtatcaacctgctgttgttgctgcccatcagctgaggattcttcagaacctgtgatcagaaacctcttgtcaacaacttcatcggcttggtgtggaattgacactcgaacccatttttccaggttcatctctccttcaaacatttgatctacaggactctttcctgttatcatctcaaggagcattatcccgtagctgtagacatcaccacttgtcgatgttttggttccatatccgtattctagatgaatagataaaaaaattcaaataatgagaaacagaacaattttacagccctggtggacttatcgggagataccacaattttcaatttaaagtttgatatctacaccagaaaattccaagttttacactacaaagcattctactccttccattcaaaaataagttgtttcaatagttaaaaatttagtctaaagtaagccgatttctgcccttttatctacccactatgaataaattgtatgttttttcactttagtacccccttactgatcaccttaaaatactattttctattaatgagggacacatactttgacctttttaactcttcactactaaattttctacggaaagtaggaatcaacttatttttggactaagagagtacctcttggtaccacctcgaagatcataaaatttcaccaagaaagatattatatttttagtataaaatgttatttctctttctttcccaccttccccattataaattctatgatcctttgtaatgttcattacaaagtagaaaagttcagttgtcttaagcccacgtaattcacgtaaagaaaagtaaaaaaggttattgagggctacactacaaaattaatcacatcatgtatagaaaggaagagctagcacctggaggtatatagcctatggtacccttcatattgtgagtggtagaaacagattcctcatctctaacacatgtttgtgtgtgcaaccttgcaagcccaaagtcaccaatcttggctgtcatgtcaccatcaagtagaacattgcttggtttgatgtcacagtgcacaacttgacccgccctgcatgatccatcatgcatgtactccaaggcacttgctatgtcaatggcgatagagagtacttcaactgcactgagccctctttcgctatcttcatgacgccttgggccatggatccaatcctcaaggctcccatttgtcatgaactcgtacaccaatgcacggaattcatttccagtgaagtctatacttgagcatagtgtcaccagctttactaggttccgatgccgtatagtgcttaggatctcacactctgcaacccagctattggttgcaccaatcttgttaagatctagcactttgacagcaaagggactagtgtcatgtaagacagccttgtacacagagctgaaggaaccaataccaacgaggttcctttcattaaagttttcggttgcatggaatagttcttcataagaaacaagtgggtagagttttctcttgagtatcgaatcatcaattacagttccaacctttgtcacatcaatccgcaagcattttgatttccataacatgaacatgacacccacaaagataagtaaagtgattgttgatgctattggaactgctaatacaaccactaaattacgatggtgtttggagtatgatcggaatcccgttgattccatgttatatagctctgcattaccatggatgtcaacagcagagctattcttaaagatacccccacttggcaccagacccttcaaatcgttgaaggagaggttcagcttctgaagagcttgcagcttttcaaggccttctggtatacctccaaccaatcgattgttggagaggtctaatatttgcaagcccttaagattcttgatttctctaggaattactccagagattgcattgccacacatggacagagactgaatgctttggcacttcccaattgatgttgggatactgccatctagcaaattgtaggataaatcaatggcgacgatgttccccaatcgaccgatgccctccggtattacaccggtaagtgcattgtatgacatatttagtatagagctaaggctggtaaggctgaaaactatgtcagggatactcccattgaggttgttacatgataagtctagagaaagtatgtggctcaggtggcccaactcctttggaatgctacccgctagtctattcttgcttatgtcaagcattgtcaatgcagtaagatttccgaattgtgtgggaattggcccagataagttgtttcctgatagcccaagcgcatttagatccttgagatagctgatctccaatgggatttctccatctagtaggttatcagtcatgtttagcaatgttaatctagttaattgcccaatcattggtggtatgtgtccagtgatcctattgccaccaatgtatagattttcaagagaacttgatagattaccgattgaatcagggatcttacccacaatttggttctcatagataccaaggtactcgagtttagtgctgtttgtgagatcgtccagtatgcttgtggtgtgaacaatttggttaaaccctatattgtaccaaacaagcttggaaagacgttggaggcctggagggaccttgccagtgaggaaattgtgtgatatccttatgctatggatcttagttatgttgtggagagatggcgggatatgcccggtaagcttgttgtagcaaacaatgaaaatgtggagctttggtagccctagactaatatcattgggtatctccccatgtaacttgttcattgccactgcgaaaaaggctaggttggagatgttgtaaagctgtcttggaactgtgcctgtgaggttgtttatggatagatcaaagtactggagatggcgaaggtgacctaattctttaggaatttctccagcaatagtgtttgtactagcatcaagggtggttaaaagtgacatgttaccaagagatggtgggattgcaccagtcaactggttctgtccaagttttagcatcttaagattttgcagagagtgaaagctaataggtatcatacccgtgatgctatttgccgataaatccaaagtcacaaggtgggtacaattggtgagacctgaaggaatggatccactaaaatggttggagcttccatttaatgtctctagcaggggaagcctaccaagctgatcagggatattgccaatgaacctatttttttgtagatagatggattggagggctgagaggttacctatgtcagggcttatttgtccagccaaattgagactctgtacatcgagcacggagactctaccttggcgattgcagcgcacaccagcccaagaacacacagaggagccttggttccaggatgatagtgcagccatggggtcatcagtgatgagtgatttgaaaatgagcagggcatcatggtctgtataattgctgtgggtagctgattgagattttgtagtatcaattagcaggaataatgcagtgcatacaacaagcaaggttccagaaaggtagtgcaggctggtgctcat
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| CDS seq | atgagcaccagcctgcactacctttctggaaccttgcttgttgtatgcactgcattattcctgctaattgatactacaaaatctcaatcagctacccacagcaattatacagaccatgatgccctgctcattttcaaatcactcatcactgatgaccccatggctgcactatcatcctggaaccaaggctcctctgtgtgttcttgggctggtgtgcgctgcaatcgccaaggtagagtctccgtgctcgatgtacagagtctcaatttggctggacaaataagccctgacataggtaacctctcagccctccaatccatctatctacaaaaaaataggttcattggcaatatccctgatcagcttggtaggcttcccctgctagagacattaaatggaagctccaaccattttagtggatccattccttcaggtctcaccaattgtacccaccttgtgactttggatttatcggcaaatagcatcacgggtatgatacctattagctttcactctctgcaaaatcttaagatgctaaaacttggacagaaccagttgactggtgcaatcccaccatctcttggtaacatgtcacttttaaccacccttgatgctagtacaaacactattgctggagaaattcctaaagaattaggtcaccttcgccatctccagtactttgatctatccataaacaacctcacaggcacagttccaagacagctttacaacatctccaacctagcctttttcgcagtggcaatgaacaagttacatggggagatacccaatgatattagtctagggctaccaaagctccacattttcattgtttgctacaacaagcttaccgggcatatcccgccatctctccacaacataactaagatccatagcataaggatatcacacaatttcctcactggcaaggtccctccaggcctccaacgtctttccaagcttgtttggtacaatatagggtttaaccaaattgttcacaccacaagcatactggacgatctcacaaacagcactaaactcgagtaccttggtatctatgagaaccaaattgtgggtaagatccctgattcaatcggtaatctatcaagttctcttgaaaatctatacattggtggcaataggatcactggacacataccaccaatgattgggcaattaactagattaacattgctaaacatgactgataacctactagatggagaaatcccattggagatcagctatctcaaggatctaaatgcgcttgggctatcaggaaacaacttatctgggccaattcccacacaattcggaaatcttactgcattgacaatgcttgacataagcaagaatagactagcgggtagcattccaaaggagttgggccacctgagccacatactttctctagacttatcatgtaacaacctcaatgggagtatccctgacatagttttcagccttaccagccttagctctatactaaatatgtcatacaatgcacttaccggtgtaataccggagggcatcggtcgattggggaacatcgtcgccattgatttatcctacaatttgctagatggcagtatcccaacatcaattgggaagtgccaaagcattcagtctctgtccatgtgtggcaatgcaatctctggagtaattcctagagaaatcaagaatcttaagggcttgcaaatattagacctctccaacaatcgattggttggaggtataccagaaggccttgaaaagctgcaagctcttcagaagctgaacctctccttcaacgatttgaagggtctggtgccaagtgggggtatctttaagaatagctctgctgttgacatccatggtaatgcagagctatataacatggaatcaacgggattccgatcatactccaaacaccatcgtaatttagtggttgtattagcagttccaatagcatcaacaatcactttacttatctttgtgggtgtcatgttcatgttatggaaatcaaaatgcttgcggattgatgtgacaaaggttggaactgtaattgatgattcgatactcaagagaaaactctacccacttgtttcttatgaagaactattccatgcaaccgaaaactttaatgaaaggaacctcgttggtattggttccttcagctctgtgtacaaggctgtcttacatgacactagtccctttgctgtcaaagtgctagatcttaacaagattggtgcaaccaatagctgggttgcagagtgtgagatcctaagcactatacggcatcggaacctagtaaagctggtgacactatgctcaagtatagacttcactggaaatgaattccgtgcattggtgtacgagttcatgacaaatgggagccttgaggattggatccatggcccaaggcgtcatgaagatagcgaaagagggctcagtgcagttgaagtactctctatcgccattgacatagcaagtgccttggagtacatgcatgatggatcatgcagggcgggtcaagttgtgcactgtgacatcaaaccaagcaatgttctacttgatggtgacatgacagccaagattggtgactttgggcttgcaaggttgcacacacaaacatgtgttagagatgaggaatctgtttctaccactcacaatatgaagggtaccataggctatatacctccaggtgctagctcttcctttctatacatgatctacgggataatgctccttgagatgataacaggaaagagtcctgtagatcaaatgtttgaaggagagatgaacctggaaaaatgggttcgagtgtcaattccacaccaagccgatgaagttgttgacaagaggtttctgatcacaggttctgaagaatcctcagctgatgggcagcaacaacagcaggttgatactgtggactcgaaactgctgttggagactcttttagttcccatggtggatgttgcattatgttgcgttcgggagtcccctggctcgcgcatcagtatgcacgatgcactgtctcggctgaagcggatcaatgagaaatttttgaagtctctcgcagtgtctacaccttga
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| Protein seq | MSTSLHYLSGTLLVVCTALFLLIDTTKSQSATHSNYTDHDALLIFKSLITDDPMAALSSWNQGSSVCSWAGVRCNRQGRVSVLDVQSLNLAGQISPDIGNLSALQSIYLQKNRFIGNIPDQLGRLPLLETLNGSSNHFSGSIPSGLTNCTHLVTLDLSANSITGMIPISFHSLQNLKMLKLGQNQLTGAIPPSLGNMSLLTTLDASTNTIAGEIPKELGHLRHLQYFDLSINNLTGTVPRQLYNISNLAFFAVAMNKLHGEIPNDISLGLPKLHIFIVCYNKLTGHIPPSLHNITKIHSIRISHNFLTGKVPPGLQRLSKLVWYNIGFNQIVHTTSILDDLTNSTKLEYLGIYENQIVGKIPDSIGNLSSSLENLYIGGNRITGHIPPMIGQLTRLTLLNMTDNLLDGEIPLEISYLKDLNALGLSGNNLSGPIPTQFGNLTALTMLDISKNRLAGSIPKELGHLSHILSLDLSCNNLNGSIPDIVFSLTSLSSILNMSYNALTGVIPEGIGRLGNIVAIDLSYNLLDGSIPTSIGKCQSIQSLSMCGNAISGVIPREIKNLKGLQILDLSNNRLVGGIPEGLEKLQALQKLNLSFNDLKGLVPSGGIFKNSSAVDIHGNAELYNMESTGFRSYSKHHRNLVVVLAVPIASTITLLIFVGVMFMLWKSKCLRIDVTKVGTVIDDSILKRKLYPLVSYEELFHATENFNERNLVGIGSFSSVYKAVLHDTSPFAVKVLDLNKIGATNSWVAECEILSTIRHRNLVKLVTLCSSIDFTGNEFRALVYEFMTNGSLEDWIHGPRRHEDSERGLSAVEVLSIAIDIASALEYMHDGSCRAGQVVHCDIKPSNVLLDGDMTAKIGDFGLARLHTQTCVRDEESVSTTHNMKGTIGYIPPGASSSFLYMIYGIMLLEMITGKSPVDQMFEGEMNLEKWVRVSIPHQADEVVDKRFLITGSEESSADGQQQQQVDTVDSKLLLETLLVPMVDVALCCVRESPGSRISMHDALSRLKRINEKFLKSLAVSTP |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_04g0001080 | OsPr106_04g0001080.01 | Chr04 | 1382185 | 1385921 | - | NAM | ||
| CDS seq | atgagcaccagcctgcactacctttctggaaccttgcttgttgtatgcactgcattattcctgctaattgatactacaaaatctcaatcagctacccacagcaattatacagaccatgatgccctgctcattttcaaatcactcatcactgatgaccccatggctgcactatcatcctggaaccaaggctcctctgtgtgttcttgggctggtgtgcgctgcaatcgccaaggtagagtctccgtgctcgatgtacagagtctcaatttggctggacaaataagccctgacataggtaacctctcagccctccaatccatctatctacaaaaaaataggttcattggcaatatccctgatcagcttggtaggcttcccctgctagagacattaaatggaagctccaaccattttagtggatccattccttcaggtctcaccaattgtacccaccttgtgactttggatttatcggcaaatagcatcacgggtatgatacctattagctttcactctctgcaaaatcttaagatgctaaaacttggacagaaccagttgactggtgcaatcccaccatctcttggtaacatgtcacttttaaccacccttgatgctagtacaaacactattgctggagaaattcctaaagaattaggtcaccttcgccatctccagtactttgatctatccataaacaacctcacaggcacagttccaagacagctttacaacatctccaacctagcctttttcgcagtggcaatgaacaagttacatggggagatacccaatgatattagtctagggctaccaaagctccacattttcattgtttgctacaacaagcttaccgggcatatcccgccatctctccacaacataactaagatccatagcataaggatatcacacaatttcctcactggcaaggtccctccaggcctccaacgtctttccaagcttgtttggtacaatatagggtttaaccaaattgttcacaccacaagcatactggacgatctcacaaacagcactaaactcgagtaccttggtatctatgagaaccaaattgtgggtaagatccctgattcaatcggtaatctatcaagttctcttgaaaatctatacattggtggcaataggatcactggacacataccaccaatgattgggcaattaactagattaacattgctaaacatgactgataacctactagatggagaaatcccattggagatcagctatctcaaggatctaaatgcgcttgggctatcaggaaacaacttatctgggccaattcccacacaattcggaaatcttactgcattgacaatgcttgacataagcaagaatagactagcgggtagcattccaaaggagttgggccacctgagccacatactttctctagacttatcatgtaacaacctcaatgggagtatccctgacatagttttcagccttaccagccttagctctatactaaatatgtcatacaatgcacttaccggtgtaataccggagggcatcggtcgattggggaacatcgtcgccattgatttatcctacaatttgctagatggcagtatcccaacatcaattgggaagtgccaaagcattcagtctctgtccatgtgtggcaatgcaatctctggagtaattcctagagaaatcaagaatcttaagggcttgcaaatattagacctctccaacaatcgattggttggaggtataccagaaggccttgaaaagctgcaagctcttcagaagctgaacctctccttcaacgatttgaagggtctggtgccaagtgggggtatctttaagaatagctctgctgttgacatccatggtaatgcagagctatataacatggaatcaacgggattccgatcatactccaaacaccatcgtaatttagtggttgtattagcagttccaatagcatcaacaatcactttacttatctttgtgggtgtcatgttcatgttatggaaatcaaaatgcttgcggattgatgtgacaaaggttggaactgtaattgatgattcgatactcaagagaaaactctacccacttgtttcttatgaagaactattccatgcaaccgaaaactttaatgaaaggaacctcgttggtattggttccttcagctctgtgtacaaggctgtcttacatgacactagtccctttgctgtcaaagtgctagatcttaacaagattggtgcaaccaatagctgggttgcagagtgtgagatcctaagcactatacggcatcggaacctagtaaagctggtgacactatgctcaagtatagacttcactggaaatgaattccgtgcattggtgtacgagttcatgacaaatgggagccttgaggattggatccatggcccaaggcgtcatgaagatagcgaaagagggctcagtgcagttgaagtactctctatcgccattgacatagcaagtgccttggagtacatgcatgatggatcatgcagggcgggtcaagttgtgcactgtgacatcaaaccaagcaatgttctacttgatggtgacatgacagccaagattggtgactttgggcttgcaaggttgcacacacaaacatgtgttagagatgaggaatctgtttctaccactcacaatatgaagggtaccataggctatatacctccaggtgctagctcttcctttctatacatgatctacgggataatgctccttgagatgataacaggaaagagtcctgtagatcaaatgtttgaaggagagatgaacctggaaaaatgggttcgagtgtcaattccacaccaagccgatgaagttgttgacaagaggtttctgatcacaggttctgaagaatcctcagctgatgggcagcaacaacagcaggttgatactgtggactcgaaactgctgttggagactcttttagttcccatggtggatgttgcattatgttgcgttcgggagtcccctggctcgcgcatcagtatgcacgatgcactgtctcggctgaagcggatcaatgagaaatttttgaagtctctcgcagtgtctacaccttga
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| Protein seq | MSTSLHYLSGTLLVVCTALFLLIDTTKSQSATHSNYTDHDALLIFKSLITDDPMAALSSWNQGSSVCSWAGVRCNRQGRVSVLDVQSLNLAGQISPDIGNLSALQSIYLQKNRFIGNIPDQLGRLPLLETLNGSSNHFSGSIPSGLTNCTHLVTLDLSANSITGMIPISFHSLQNLKMLKLGQNQLTGAIPPSLGNMSLLTTLDASTNTIAGEIPKELGHLRHLQYFDLSINNLTGTVPRQLYNISNLAFFAVAMNKLHGEIPNDISLGLPKLHIFIVCYNKLTGHIPPSLHNITKIHSIRISHNFLTGKVPPGLQRLSKLVWYNIGFNQIVHTTSILDDLTNSTKLEYLGIYENQIVGKIPDSIGNLSSSLENLYIGGNRITGHIPPMIGQLTRLTLLNMTDNLLDGEIPLEISYLKDLNALGLSGNNLSGPIPTQFGNLTALTMLDISKNRLAGSIPKELGHLSHILSLDLSCNNLNGSIPDIVFSLTSLSSILNMSYNALTGVIPEGIGRLGNIVAIDLSYNLLDGSIPTSIGKCQSIQSLSMCGNAISGVIPREIKNLKGLQILDLSNNRLVGGIPEGLEKLQALQKLNLSFNDLKGLVPSGGIFKNSSAVDIHGNAELYNMESTGFRSYSKHHRNLVVVLAVPIASTITLLIFVGVMFMLWKSKCLRIDVTKVGTVIDDSILKRKLYPLVSYEELFHATENFNERNLVGIGSFSSVYKAVLHDTSPFAVKVLDLNKIGATNSWVAECEILSTIRHRNLVKLVTLCSSIDFTGNEFRALVYEFMTNGSLEDWIHGPRRHEDSERGLSAVEVLSIAIDIASALEYMHDGSCRAGQVVHCDIKPSNVLLDGDMTAKIGDFGLARLHTQTCVRDEESVSTTHNMKGTIGYIPPGASSSFLYMIYGIMLLEMITGKSPVDQMFEGEMNLEKWVRVSIPHQADEVVDKRFLITGSEESSADGQQQQQVDTVDSKLLLETLLVPMVDVALCCVRESPGSRISMHDALSRLKRINEKFLKSLAVSTP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0122200 | RBH | 2.648540 | 2.445087 | 0.422144 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g03210 | RBH | 1.728495 | 1.509768 | 0.103668 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0122200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001050 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0001020 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0001080 | RBH | 0.0 | 0.462739 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0001090 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0000620 | SBH | 2.477253 | 2.460262 | 4.295597 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0025500 | RBH | 0.760835 | 0.694158 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0001200 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0024300 | RBH | 1.1023455 | 3.1848745 | 0.035089 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0001070 | RBH | 0.075250 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0001160 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0001160 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0001020 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0001190 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G001160 | RBH | 0.0 | 0.0 | 0.115396 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0001170 | RBH | 0.0 | 0.0 | 0.0 |
