Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_03g0038200 | OGI:03093760 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr03:35969230-35973096 | ||||||||
| Gene Symbol | OsbHLH089, bHLH089, bHLH89 | ||||||||||
| DNA seq | tcatgtcactctttcataggtgccaccaatctgcatgtggagccattccgatggtgttgatccctgggcgtattctcttggtgtttgtggatcaaacgtcaaTccaggagccgtgttgtatacctgagcaccaaactgcaaccaaaagacccaaaagaaaataaacaattttaatactaaaaaccaaatttggaagtttacataaagctccacagagctactagtacttagtaaatacataaacacattgaactaaacaaacagacaaatgccatggttagataaagagtacaaatcaggaaaatgtttcaatgatgtgtatcctctgcagatattaaatgccttgccatgcctaaacgtttttgaaattcaggagtatagcttcaataaaatggtaataattttcagaagggagcaatggataacgccttcaaaaactaaaacatatggtagtagcatatagctggcttgcctgtagagtatgggacttgttgAaaaaaacaacatattaacacagtgttcaaagtcaaagattggagctaagataaagtgccagtagcgcatagtatgccacagaatctttcaaatatatcttgagaccttttattgtaataatgatcatgctatttaaactgttaattttactacttgacttacatctttgggtggaaatgcttcgattccattattcacatgagcattaacagcctcaagcttcatggacaaaaactgcagataacagcaaattatagagcgattagctgagatatggagggtaaagaaatttcataaagcgccaatggtgaaacagcatacctcaacttgccgttgcaaagcctggatataattaattatctcatcaagtactgatgctttcccaataacctggccaagcaagcaaaagttttccaatgaaaatcaattacagaaacagaactggggatgttttagaggtcatgttacaaaaatataatatttaaaccccaacttatgggacaaaataaggaaaatatgttgagaccttgttgcatccagggacaagatcctggagaattttcatccgctcacttattttctcacgacgtgcctgccAaaaatgaacagaattttcagtggtcatatcatagtataaacatgaaatggaccgtttgcccccCAaaaaaaagaaagatcttcagaggttcgatttgtaaccagattttccactcctgtaatgggactgtgattgacaagaacggtaacaaaaacaagtacactaactgaccctttcggcaaggctatggctgtcagtagcttgaccccttcttgccctcacatggatgtagtcttgctttggtggttctggtggtggcggattttgatcaccagacttgctagcatttcttgaatcagtttcagcctctgttcttaaactgctattatctgatttacttgccttgaaacgctttgcttctgaatcagtctgctcataaaaattccacataatccgtgcatatcaaaacatgatccatgctttttttttctctttaaaggttaaaggggaaaaggcactgtatattgccttctgacctcaaaagttaaaacaaccactcaagttatcaacatgatcaataattggtgaatatatgaggcaaaaatcatagaaatgcaccaatagaatcaaagaactagaatgcctgacaatgatgacctccactaatattaagtgtgcatgttcaaattcaaattacaggcacctttggctactaaatgcaagcaaagaaatgctgattgcatcttgtatttgagctcatgcaatttctagggttatagatctgatggtgctgcagaatgcctcaattatacggtggaccatggaaccactcaggatccttgtctccagccaaaacattgtgtggaccaacaggttgttggctcagtagttagtactgaagaatggagataataaatagaatttaatagtctgtctaacaacagcttttaaccagcgtgaacagatagcagcaactgttgcaatttagtcaaagacccaaaagctgttgcattgcaccagagttactaagcacttggcattcgacaaggatagttaagacgggtgttggccgatagcttgatcaaatataaacagctccaagaagattccagcagtaacataatgtcgagtgttgagtgttggctacagttatgtatagaagaaaaatatcaagctctatgccatattcacatcgatgggtagttcAaaaaaaactagttccatttcttctagaggtaaaaatttttagatttttgtgggaaaaataaactagtatagtagtatgttagcttgagagttgagttcatatgctaccaacactccagtgaatcaaacataacaagcattaccaagcaacaaaaatcaaaatgtcataataggaaattcactatagatgcaaactacagcactactgggtgctaacaactagtactataatatgaatgtcttataatgttctttcttttgacaaaagttgagaacattacaaaggtgcaaacactatagaagtagtccttgtcaaaaacagcacccagaatcaacttggatatagtgaaaccattatgttaacaatagaaaaccgacaatctaatactccaggttttataaatactaaaggtcaaacactacttatggttgaatgagaaattctataatatgaaagtcacatggatgaacgattgcacataagcttgttccatgttttcctgtgtaacagagcatgacactctcaactgagctcagcccagctgtgaacaataaattgtgttctatattatactacgatgtagaagtaattccacaagcaatccagaggaaactatatcgatcaaaaggcttgaaacctcatctggtgaagccttccacgtgaggaggACacaccccatgttcctacgcctaactgcattcagcattgacaaagtgtcttctcaactctcaattaccaaaggtatttgctaattatagaattcgaaactattgacagtgctagcttttccttactgcactttgtgtgcacattctgtgttcttttcaatttacggaactttcgagactaaattatgctgagaattccttttcttacatacaggtatcatagcagtgactgtctatctgcagccagaactacagattggctcgttccactgtacattaccaaatcaaaaacaagcatcaacggggaacccagctagagctataagaaagcatgaacagcaccacgccaatagtagacacagccagatcgcacaagcaaatttacttcagtctaaagccgccattttccctggtaaacctccagattcccaccaccgaaggctgacacaccaaaattacccccaaactcacccaatgccacacggatcacgaccaatgcggagcataaaaaaacctaccaaatcctgaccgccgcctcctcctccggaagtggagacgatcctggacgagtcgtcctcgagcgcgggggcctcccgctgcctcctccgccctgcgcctcctcctccgccacccccgcggctcccattgctctgctccgtgaccccggacgccgccgcctccaacccacgccctcctcctcctccaccaccaccgccaccgaggtacggcgttcgccagagctcggcggcgagcgtgggggcggggtccatggcagcagcagcagcaatgaagcacctccgcccaagagggctcgccggtggatggagctctagggtttgaggcgggcgaggcgaccagatcgggggcggagaggagagctcgcagtggcactgtacactagtagtagcggtgacgagagggagagagcgctttagagaagagtggatggagtggaaggg
More
|
||||||||||
| CDS seq | atggaccccgcccccacgctcgccgccgagctctggcgaacgccgtacctcggtggcggtggtggtggaggaggaggagggcgtgggttggaggcggcggcgtccggggtcacggagcagagcaatgggagccgcgggggtggcggaggaggaggcgcagggcggaggaggcagcgggaggcccccgcgctcgaggacgactcgtccaggatcgtctccacttccggaggaggaggcggcggtcaggatttgactgattcagaagcaaagcgtttcaaggcaagtaaatcagataatagcagtttaagaacagaggctgaaactgattcaagaaatgctagcaagtctggtgatcaaaatccgccaccaccagaaccaccaaagcaagactacatccatgtgagggcaagaaggggtcaagctactgacagccatagccttgccgaaagggcacgtcgtgagaaaataagtgagcggatgaaaattctccaggatcttgtccctggatgcaacaagtttggtgctcaggtatacaacacggctcctggAttgacgtttgatccacaaacaccaagagaatacgcccagggatcaacaccatcggaatggctccacatgcagattggtggcacctatgaaagagtgacatga
More
|
||||||||||
| Protein seq | MDPAPTLAAELWRTPYLGGGGGGGGGGRGLEAAASGVTEQSNGSRGGGGGGGAGRRRQREAPALEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKFGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT |
||||||||||
| Function | Transcription factor BHLH089 [UniProtKB/Swiss-Prot:Q84T08] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_03g0038200 | OsPr106_03g0038200.01 | Chr03 | 35969230 | 35973096 | - | NAM | ||
| CDS seq | atggaccccgcccccacgctcgccgccgagctctggcgaacgccgtacctcggtggcggtggtggtggaggaggaggagggcgtgggttggaggcggcggcgtccggggtcacggagcagagcaatgggagccgcgggggtggcggaggaggaggcgcagggcggaggaggcagcgggaggcccccgcgctcgaggacgactcgtccaggatcgtctccacttccggaggaggaggcggcggtcaggatttgactgattcagaagcaaagcgtttcaaggcaagtaaatcagataatagcagtttaagaacagaggctgaaactgattcaagaaatgctagcaagtctggtgatcaaaatccgccaccaccagaaccaccaaagcaagactacatccatgtgagggcaagaaggggtcaagctactgacagccatagccttgccgaaagggcacgtcgtgagaaaataagtgagcggatgaaaattctccaggatcttgtccctggatgcaacaagtttggtgctcaggtatacaacacggctcctggAttgacgtttgatccacaaacaccaagagaatacgcccagggatcaacaccatcggaatggctccacatgcagattggtggcacctatgaaagagtgacatga
More
|
|||||||
| Protein seq | MDPAPTLAAELWRTPYLGGGGGGGGGGRGLEAAASGVTEQSNGSRGGGGGGGAGRRRQREAPALEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKFGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 7.332376 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0802900 | RBH | 0.0 | 0.0 | 2.228613 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g58830 | RBH | 0.0 | 0.0 | 0.538783 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0802900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0038640 | RBH | 0.0 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0038310 | RBH | 0.0 | 1.083895 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0038370 | RBH | 0.0 | 0.000000 | 2.724618 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0038660 | RBH | 0.0 | 0.423948 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0006030 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0572200 | RBH | 2.9186945 | 4.118512 | 10.150207 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0037980 | RBH | 0.0 | 0.615897 | 0.431015 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0574300 | RBH | 3.4455435 | 1.678512 | 15.5579865 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0038550 | RBH | 0.0 | 0.225801 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0038520 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0038130 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0038190 | RBH | 0.0 | 0.360444 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0038230 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G037990 | RBH | 0.0 | 6.395297 | 2.264073 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0037770 | RBH | 0.0 | 0.000000 | 0.000000 |
