Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_03g0020060 | OGI:03042190 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr03:16394420-16399028 | ||||||||
| Gene Symbol | SAPK1, OsSAPK1, OsSnRK2.1, SnRK2.1 | ||||||||||
| DNA seq | gtattattacttacaatataagtgcattccctatatgtaaatgtgcactcgatatatgtccataatctgcggtgcaattgtgcaaagatgatagtactaaaacagaatctgctgcaagctggttgtcaattgcgagagacgataggaatttgcataaagaagaaatgatcagacaactaaaattcagaatcagcagcacaaagcactctgccaagaatataactagcatgcaattaaattcatcttatttatccacagcgatggcaatctctcggtcacaaagcatatgtgatcccagaagtaaaaacgaggcatgaatgacagcaacacatcagccacaaagaaagctcgctgccccgctacttcagtcttcaaccagctgatgatcgatcgatcgatcgatcgaatttggcatctatcgatcacaaggcgcacacgaagtccccgctgttctcgatgtcaatgtcgtcgatatcgtcgatgtcgtcgagatccatgctccccaggcaggcgacctgcccggcgccggcgagcttcatggcgtcgcccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacggcgtgttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggcaggttcttcaggaaccatgggtggttcttgatctctgggatagttatcctctacaaagagaaatgcatgcaatttacgaatgtttgtcggttgacaccatgttggaaagccaatgcagattgatcactaagctactaggtgaaatggtgaattatttcatgacgaggagtcacctgctcaggatttccaacgaaaatccgggacaggagatgtgtgcagtccgctgaaactcgaacgtagtctggaattgaatactgtacactgagtatcctctgcaaaagaggtcaataggctacatgatcagactgactagaattgagacagattttgaattaacaggagtgggggctatgggcaatggccggatttactcacagtgatcgtcttgcggaagttccttgggtcatcagggtcctcaaaaggatacgcaccaacaagcatcacatagagtgttaccccacatgaccaaacatcagctacctaagattcgaagtaattatgtttcaacagtccagtcatggaaattaagactatttggtaggatcatagagagactcatcccaaatcatgcgaacaaaattacctttccatcgtattcctttctagagaggacctctggagcaatgtaagccggtgtgccaacagttgatttcggttgagagtgcaggacagaagactgaaaattaaaaagaaaggcccaaagggaggggtggccaggtgggtactaattttaggcaacagaaaacatgaatgtcagaggatagtatctgcataaatcataccttggagtaaccaaaatcacaaatcttaagccgaggtgcgacactgccatccaagagagtattttcgagtttcaaatctctatggcatacttgctgcaagcagaaaaagataaggacaaatgtgggcaatagtctacaaaagagttgatatttttaagtcaactagacatcatgtaccatagaatgacaatagctcactccagaaatcagctgttggaagaagaaccttgcctgatgaggataatgaataatttgtcaatgcaatgacataaatctgcataagagtcccaaagattgtggagaatattctctacctcatcctcactgaatctccctgcgttgcaaatcctttcaaatagctcaccaccagcagcatattccataactattgccaaatgtgtgggagttagcacgacctgaaaactaaggactactttaatttttcaactctcaatacaagtttgaatgttaaacctcgtcaaacagtcaaatacatgtgttcagcgatgaatgcagagaaagaactgcggaaagtgctcgcaatattcacaaggatagctttattctaaaaaccctgttcaacagatcttggaagaaaaaatgacgaaagaacctaaaatagccctgaaaattttagcacctaatttaagactttctaggtctgttttgggccttgggccaacttgttgtattcaactctcttctctaatggaatgccatgcaaagcttttgcgtgctccccacaaaagAattttttataacaacgtcgatacagtaaaaggcagcataaaaggacacatacgcattgtcaatctaaataagaatcaaccagccccatcgtttggcctaaacagccaaagaataagccaaaatttgaatttttgaacttaattttgaagttgattttgaaatgcttttaacgtaatttttgttaattttggcttttaagtcgctacgaacaaatctacaaaagttttacttataaattaattttaattttctaataagccaaataagccattttaggtaaaatggcaaccgatgggagccgttcttccctgagttacacagaacacagacagtagtaagacagagttaacctgaaaaacatgactcaacaattaatgccagacactagtacatttagtttcctgaaaatagcagattagcaacttttgctttcatgcacttctccttttcttttgtaaataacttgtttttataataataactcctaatttttgttattttagaaataactactattttcatttatgcagagtgtaaaaaaactgccctgatttttttccttcaaaaaggaatctatgcaattaggcaattagcctactagtctgcccgtgggaaaaacaaagtacaaggttcatgcaaatcatacacactaaagtgagcagcatattcgaagttaaagagaactcaaaacagaaaaagaacaaaacaggggtgaaaacagtgacattcaagggataaaagtcaccatcaaaagagtcctaaatgtgcaactaaactttcacgttacatattccatctgtcctcctataaacatagaggcgtggaagaatacagataactatcgctttctatcagtagaaaaaaaaaattcccgaaaagagcagaaacaatcataacactcaattcaactagagattatattacacattacttccctagaggcccaagagattacctccttgaaccggattatgtttggatgcttcagtgatcggtggttcataatctccctttgaacatgttcatcaatctacacaacgataaaaaaaaaaaagtggagttaaccaatgaaccaaagacgctcaatgatggataccaaaggcccttattagagtaccatttttttttttacagagagattaatattacaaacaaaaacagctcgaacagaacaaaaaatacaacaaaaatatcatcagcccgaaatagtaatggacagcacctcgacagtaaacgaggaagaagaacaagaaacggacagcatAGCacacagtaacagtagagcaattaatgaactaataaatgacgagtgacatgtatgaaaggctagcgaaaacgctagaaacatccaccaaatgccaaagtgagctagaaaaggccatcaaaagcagctacaaatttgaatataaaagacagcaagctacataagtaataaaattgattgaaacttatgtcatcatagccagtgcttcacgccaaaaaaataaaaataaaaaatcactatgcgtagaacagtttggctctgctagcttccttgaggcaaatgtcaccgataagagttcgtcacgtgttagagagtcagggaccaaatatagtcaaagggattgaccaattttcttgggttccttttggcctaacaaaaggtaccagcattttgggatatattccttctctagaagcaaattagttacaactaaaagtaatctagaaagaaatgcgcaagcttcaaccaatcaactgcactaaaaagatgggggaacaaatgtaaaatcctactgcaaaactaacgctaaccgattctcccggatgctgaaaattcggctatttttgcaggactccaaatgtgaaggaaacatttcaagcagcgttgcactagcaattcagacaagccccggccgaacggagcaaacatctcacagccagcacagatcgcacagtcgatgtgcataccataacaaaaaagaaagaaagaaagaaagaaagaaaaaagtttggagggtgaagctttcattttaccttgagtcccctctcgatgaacttgacggcgaagaggtggttggtggcgacgtcgcggacgagcttggccaccccgaagttcccggacccgatgtccctcatcacctcgtaccgctccatatcccctcaacgacctcgctccgctggtccgccccctccgttaatctcttggccgctcgtggcaactcgctcacacgcagccagctcgatcgatctctcgcccgccaagaagaaggagctggatgggacgggaggcggtgcacgagggaggggagggattctggggcgctcgtgatggggattgggatgagcgagaggtggtggtggtgatcgagcaggggaggttgggaGgagggagacgtttcctttgtataggcggcggcagtcgagcgagccccgac
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| CDS seq | atggagcggtacgaggtgatgagggacatcgggtccgggaacttcggggtggccaagctcgtccgcgacgtcgccaccaaccacctcttcgccgtcaagttcatcgagaggggactcaagattgatgaacatgttcaaagggagattatgaaccaccgatcactgaagcatccaaacataatccggttcaaggaggtcgtgctaactcccacacatttggcaatagttatggaatatgctgctggtggtgagctatttgaaaggatttgcaacgcagggagattcagtgaggatgaggcaaggttcttcttccaacagctgatttctggagtgagctattgtcattctatgcaagtatgccatagagatttgaaactcgaaaatactctcttggatggcagtgtcgcacctcggcttaagatttgtgattttggttactccaagtcttctgtcctgcactctcaaccgaaatcaactgttggcacaccggcttacattgctccagaggtcctctctagaaaggaatacgatggaaaggtagctgatgtttggtcatgtggggtaacactctatgtgatgcttgttggtgcgtatccttttgaggaccctgatgacccaaggaacttccgcaagacgatcactaggatactcagtgtacagtattcaattccagactacgttcgagtttcagcggactgcacacatctcctgtcccggattttcgttggaaatcctgagcagaggataactatcccagagatcaagaaccacccatggttcctgaagaacctgcccatcgagatgaccgacgagtaccagaggagcatgcagctggcggacatgaacacgccgtcgcagagcctggaggaggtcatggcgatcattcaggaggcccggaaaccgggcgacgccatgaagctcgccggcgccgggcaggtcgcctgcctggggagcatggatctcgacgacatcgacgatatcgacgacattgacatcgagaacagcggggacttcgtgtgcgccttgtga
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| Protein seq | MERYEVMRDIGSGNFGVAKLVRDVATNHLFAVKFIERGLKIDEHVQREIMNHRSLKHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSVAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCTHLLSRIFVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQEARKPGDAMKLAGAGQVACLGSMDLDDIDDIDDIDIENSGDFVCAL |
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| Function | Serine/threonine-protein kinase SAPK1 [UniProtKB/Swiss-Prot:Q75LR7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_03g0020060 | OsPr106_03g0020060.01 | Chr03 | 16394420 | 16399028 | - | NAM | ||
| CDS seq | atggagcggtacgaggtgatgagggacatcgggtccgggaacttcggggtggccaagctcgtccgcgacgtcgccaccaaccacctcttcgccgtcaagttcatcgagaggggactcaagattgatgaacatgttcaaagggagattatgaaccaccgatcactgaagcatccaaacataatccggttcaaggaggtcgtgctaactcccacacatttggcaatagttatggaatatgctgctggtggtgagctatttgaaaggatttgcaacgcagggagattcagtgaggatgaggcaaggttcttcttccaacagctgatttctggagtgagctattgtcattctatgcaagtatgccatagagatttgaaactcgaaaatactctcttggatggcagtgtcgcacctcggcttaagatttgtgattttggttactccaagtcttctgtcctgcactctcaaccgaaatcaactgttggcacaccggcttacattgctccagaggtcctctctagaaaggaatacgatggaaaggtagctgatgtttggtcatgtggggtaacactctatgtgatgcttgttggtgcgtatccttttgaggaccctgatgacccaaggaacttccgcaagacgatcactaggatactcagtgtacagtattcaattccagactacgttcgagtttcagcggactgcacacatctcctgtcccggattttcgttggaaatcctgagcagaggataactatcccagagatcaagaaccacccatggttcctgaagaacctgcccatcgagatgaccgacgagtaccagaggagcatgcagctggcggacatgaacacgccgtcgcagagcctggaggaggtcatggcgatcattcaggaggcccggaaaccgggcgacgccatgaagctcgccggcgccgggcaggtcgcctgcctggggagcatggatctcgacgacatcgacgatatcgacgacattgacatcgagaacagcggggacttcgtgtgcgccttgtga
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| Protein seq | MERYEVMRDIGSGNFGVAKLVRDVATNHLFAVKFIERGLKIDEHVQREIMNHRSLKHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSVAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCTHLLSRIFVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQEARKPGDAMKLAGAGQVACLGSMDLDDIDDIDDIDIENSGDFVCAL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.700529 | 1.993706 | 2.918016 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0390200 | RBH | 0.683120 | 0.726643 | 6.426646 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g27280 | RBH | 0.448801 | 0.474804 | 1.607214 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0390200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0020350 | RBH | 0.647057 | 40.985050 | 6.654809 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0020220 | RBH | 0.516617 | 1.239751 | 2.222037 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0020240 | RBH | 0.463760 | 30.922066 | 5.375929 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0020240 | RBH | 0.124384 | 0.791158 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0023670 | RBH | 7.845781 | 50.989571 | 34.392212 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0259500 | RBH | 3.5158675 | 10.230072 | 28.841567 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0019840 | RBH | 0.000000 | 0.522225 | 0.639711 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0260500 | RBH | 8.1479115 | 26.6010475 | 3.5520525 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0020050 | RBH | 0.249928 | 0.161915 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0020070 | RBH | 0.809030 | 1.744249 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0020160 | RBH | 1.360122 | 10.888626 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0020030 | RBH | 0.789347 | 0.932763 | 1.612674 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0019900 | RBH | 0.272444 | 6.272382 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G019930 | RBH | 0.657938 | 3.879245 | 2.470119 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0019790 | RBH | 0.000000 | 4.343329 | 2.008831 |
