Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_03g0007060 | OGI:03013760 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr03:5183587-5186039 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | acacaccacctcactcgcgttagctcggatctgtagcaaagagcgaagagcgaagctgcagcctgcagctacgcttgttcgcttgagacctagggtacgagcaacaataatagagagtgactgagtgagcgagcactgagtagcaagggcccggcacaaacaggacgcagccggcaacgtgtacgtcgaaccaaacagagaacagctagctaatcgatcggtcgccatgaccaaggacgacgccgtcccggtggccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctcgcctccatgaactccgtcctcctcggctatggtacgtcacgttcgtccgtacgtacgtgcatgcaagcatgtagattaaccggttaagatgttcagatggtaatggcgttcttgatctgtgtatatgcagatatctcggtgatgagcggcgcgcagatattcatgaaggaggatttgaagatcaccgacacgcagatcgagatcctcgccggcgtcatcaacatctactcgctgttcggctcgctggcggcgggcatgacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcacgggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgaggtggcgccgacgtcggcgcgcggcttcctcacctcgttcccggaggtgttcaacaacagcggcatcctcctcggctacgtctccaacttcgccttcgcgcgcctccccgtccacctgagctggcgcgccatgttcctcgtcggcgccgtgccgcccatcttcctcggcatcgccgtcctcgccatgccggagtcgccccggtggctcgtcatgcggggccgcatcgaggacgcgcgccgcgtgctcctcaagacctccgactcgcccgacgaggccgaggaccggctcctcgacatcaagaaagccgtcggcatccccgaggacgcgtccgatggcgaggacgtggtcgccatcgtccgcgcgaataaggcctcacagggagagggggtgtggaaggagctgctgctcaacccgacgaggcccgtccgccgcatgctcgtcgccgggctcggcctgatgttcatccagcaagccaccggcgtcgactgcgtcgtgatgtacagcccgcgggtgttcgagcgcgccggcattaagtcgaagacgaactcgctgggggcgtccatggcggtgggcgtttgcaagaccttcttcatcccgatcgcgacgctcctcctcgaccgcgtcggacggaggccgctcctcctcgccagcggcggcggcatggccatcttcctcttcaccctggccacgtccctgctcatgatggaccggcggccggagggcgaggcgaaggcgctaggcgccataagcatcgccgcgatgctgtcgttcgtggcgtcgttcgcctcggggctgggccccgtcgcgtgggtgtacacgtcggagatctacccggtgcggctgcgtgcgcaggcggcggccatcgggacggggctgaaccggctgatgagcggtgccaccaccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacgcgtccatcgccgccgcagggtgggtgttcatgtacttcttcctgccggagaccaagggcaagagcctggaggacaccgtgaagctcttcggcaaggacacagacgacgacgatgacgtcgacactagccgccatgagcgcaagaggtccactgagctgagcgctcagcactgaacagaacacgtccgtcccgagtccgagtgtggtcgaagcctattcgttctccgatagaaaaaagcttcgacatcgtgtgttgctttgtgaatcttcagattctggccacttaggttagattgctagacttttggatctcgtgcacatcagcttgttggccttagccaacatgtagggacattgagctgctttacgggggaaaagatcgtgtgatattccacactgcagggacgaatccacgtaaaaaggtcgcagtcaccgttgcggttacgcagcttggcacggatctgtgggtctttttcaccctgtacaacaattcaaccggccaatccttcgacgacagcattgagatccagggagccagggtctacctggctatgttttcttgttcagatattaccgtggcagtgtaattgtatacgagtctataatgtatatagctttttatgtatatgactcggtcacttttgtgtccctgtgtgactgtcgcttaatataaaggagatttccttttatttgttttactgtactggtgctggaacacaaaatttcattcgttctgattttttggact
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| CDS seq | atgaccaaggacgacgccgtcccggtggccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctcgcctccatgaactccgtcctcctcggctatgatatctcggtgatgagcggcgcgcagatattcatgaaggaggatttgaagatcaccgacacgcagatcgagatcctcgccggcgtcatcaacatctactcgctgttcggctcgctggcggcgggcatgacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcacgggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgaggtggcgccgacgtcggcgcgcggcttcctcacctcgttcccggaggtgttcaacaacagcggcatcctcctcggctacgtctccaacttcgccttcgcgcgcctccccgtccacctgagctggcgcgccatgttcctcgtcggcgccgtgccgcccatcttcctcggcatcgccgtcctcgccatgccggagtcgccccggtggctcgtcatgcggggccgcatcgaggacgcgcgccgcgtgctcctcaagacctccgactcgcccgacgaggccgaggaccggctcctcgacatcaagaaagccgtcggcatccccgaggacgcgtccgatggcgaggacgtggtcgccatcgtccgcgcgaataaggcctcacagggagagggggtgtggaaggagctgctgctcaacccgacgaggcccgtccgccgcatgctcgtcgccgggctcggcctgatgttcatccagcaagccaccggcgtcgactgcgtcgtgatgtacagcccgcgggtgttcgagcgcgccggcattaagtcgaagacgaactcgctgggggcgtccatggcggtgggcgtttgcaagaccttcttcatcccgatcgcgacgctcctcctcgaccgcgtcggacggaggccgctcctcctcgccagcggcggcggcatggccatcttcctcttcaccctggccacgtccctgctcatgatggaccggcggccggagggcgaggcgaaggcgctaggcgccataagcatcgccgcgatgctgtcgttcgtggcgtcgttcgcctcggggctgggccccgtcgcgtgggtgtacacgtcggagatctacccggtgcggctgcgtgcgcaggcggcggccatcgggacggggctgaaccggctgatgagcggtgccaccaccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacgcgtccatcgccgccgcagggtgggtgttcatgtacttcttcctgccggagaccaagggcaagagcctggaggacaccgtgaagctcttcggcaaggacacagacgacgacgatgacgtcgacactagccgccatgagcgcaagaggtccactgagctgagcgctcagcactga
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| Protein seq | MTKDDAVPVAVAPAKRPPINKYAFGCALLASMNSVLLGYDISVMSGAQIFMKEDLKITDTQIEILAGVINIYSLFGSLAAGMTSDWLGRRYTMVLAAAIFFTGALLMGLAPNYAFLMAGRFVAGIGVGYALMIAPVYTAEVAPTSARGFLTSFPEVFNNSGILLGYVSNFAFARLPVHLSWRAMFLVGAVPPIFLGIAVLAMPESPRWLVMRGRIEDARRVLLKTSDSPDEAEDRLLDIKKAVGIPEDASDGEDVVAIVRANKASQGEGVWKELLLNPTRPVRRMLVAGLGLMFIQQATGVDCVVMYSPRVFERAGIKSKTNSLGASMAVGVCKTFFIPIATLLLDRVGRRPLLLASGGGMAIFLFTLATSLLMMDRRPEGEAKALGAISIAAMLSFVASFASGLGPVAWVYTSEIYPVRLRAQAAAIGTGLNRLMSGATTMSFLSLSNAITIAGSFYLYASIAAAGWVFMYFFLPETKGKSLEDTVKLFGKDTDDDDDVDTSRHERKRSTELSAQH |
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| Function | Polyol transporter 5 [UniProtKB/Swiss-Prot:Q8VZ80] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_03g0007060 | OsPr106_03g0007060.01 | Chr03 | 5183587 | 5186039 | + | NAM | ||
| CDS seq | atgaccaaggacgacgccgtcccggtggccgtggcgccggcgaagcgcccgcccatcaacaagtacgccttcggctgcgctctcctcgcctccatgaactccgtcctcctcggctatgatatctcggtgatgagcggcgcgcagatattcatgaaggaggatttgaagatcaccgacacgcagatcgagatcctcgccggcgtcatcaacatctactcgctgttcggctcgctggcggcgggcatgacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcacgggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgaggtggcgccgacgtcggcgcgcggcttcctcacctcgttcccggaggtgttcaacaacagcggcatcctcctcggctacgtctccaacttcgccttcgcgcgcctccccgtccacctgagctggcgcgccatgttcctcgtcggcgccgtgccgcccatcttcctcggcatcgccgtcctcgccatgccggagtcgccccggtggctcgtcatgcggggccgcatcgaggacgcgcgccgcgtgctcctcaagacctccgactcgcccgacgaggccgaggaccggctcctcgacatcaagaaagccgtcggcatccccgaggacgcgtccgatggcgaggacgtggtcgccatcgtccgcgcgaataaggcctcacagggagagggggtgtggaaggagctgctgctcaacccgacgaggcccgtccgccgcatgctcgtcgccgggctcggcctgatgttcatccagcaagccaccggcgtcgactgcgtcgtgatgtacagcccgcgggtgttcgagcgcgccggcattaagtcgaagacgaactcgctgggggcgtccatggcggtgggcgtttgcaagaccttcttcatcccgatcgcgacgctcctcctcgaccgcgtcggacggaggccgctcctcctcgccagcggcggcggcatggccatcttcctcttcaccctggccacgtccctgctcatgatggaccggcggccggagggcgaggcgaaggcgctaggcgccataagcatcgccgcgatgctgtcgttcgtggcgtcgttcgcctcggggctgggccccgtcgcgtgggtgtacacgtcggagatctacccggtgcggctgcgtgcgcaggcggcggccatcgggacggggctgaaccggctgatgagcggtgccaccaccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacgcgtccatcgccgccgcagggtgggtgttcatgtacttcttcctgccggagaccaagggcaagagcctggaggacaccgtgaagctcttcggcaaggacacagacgacgacgatgacgtcgacactagccgccatgagcgcaagaggtccactgagctgagcgctcagcactga
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| Protein seq | MTKDDAVPVAVAPAKRPPINKYAFGCALLASMNSVLLGYDISVMSGAQIFMKEDLKITDTQIEILAGVINIYSLFGSLAAGMTSDWLGRRYTMVLAAAIFFTGALLMGLAPNYAFLMAGRFVAGIGVGYALMIAPVYTAEVAPTSARGFLTSFPEVFNNSGILLGYVSNFAFARLPVHLSWRAMFLVGAVPPIFLGIAVLAMPESPRWLVMRGRIEDARRVLLKTSDSPDEAEDRLLDIKKAVGIPEDASDGEDVVAIVRANKASQGEGVWKELLLNPTRPVRRMLVAGLGLMFIQQATGVDCVVMYSPRVFERAGIKSKTNSLGASMAVGVCKTFFIPIATLLLDRVGRRPLLLASGGGMAIFLFTLATSLLMMDRRPEGEAKALGAISIAAMLSFVASFASGLGPVAWVYTSEIYPVRLRAQAAAIGTGLNRLMSGATTMSFLSLSNAITIAGSFYLYASIAAAGWVFMYFFLPETKGKSLEDTVKLFGKDTDDDDDVDTSRHERKRSTELSAQH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 24.320362 | 7.300531 | 165.453873 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0197100 | RBH | 22.895287 | 19.265743 | 128.246872 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g10090 | RBH | 14.826767 | 12.424890 | 31.639648 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0197100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0007170 | RBH | 0.927427 | 0.0 | 68.763992 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0007140 | RBH | 4.081654 | 0.0 | 69.786362 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0007190 | RBH | 2.529684 | 1.893389 | 136.326721 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0007180 | RBH | 0.632308 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0007980 | SBH | 0.0 | 0.0 | 2.853496 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0084900 | RBH | 24.857786 | 1.2146285 | 65.877741 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0006980 | RBH | 0.753632 | 0.0 | 27.716585 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0085400 | RBH | 33.7756685 | 2.073353 | 36.9268855 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0007020 | RBH | 2.862448 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0007080 | RBH | 5.751627 | 10.254164 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0007050 | RBH | 44.439934 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0007070 | RBH | 1.942849 | 0.344318 | 42.437553 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0007040 | RBH | 0.623623 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G007070 | RBH | 0.629141 | 1.695941 | 67.921135 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0006890 | RBH | 3.961523 | 14.749030 | 184.110443 |
