Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_02g0035790 | OGI:02093740 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr02:35420570-35423497 | ||||||||
| Gene Symbol | EREBP1, OsEREBP1, OsERF#070, OsERF070, OsERF70, ERF70, AP2/EREBP#084, AP2/EREBP84 | ||||||||||
| DNA seq | gcacgcgcccagtagcaagagcaacaaccctgcaaggctgcaatctaacaagatataatatataaatatatagtcaatgcactatttaatttcggattcaacaaatgaattatgtacagaaaatcaatatggtagctagttatcaccaacatagcgcagcacagcaaagaccgaaagaaagagcagtcaacaacatagattaaaacataatggccatggattcacgatgttcatagccatatacaggtagcaacgacagaaaactagaacggaaaaaaaaaaagcagttcttgagtctcatagatggctgccatacatagacagcggatagggaacaggtccaatcaccaaagagtttcaggatgcagccttttgcatctaagctaaacataacgatatgctacccccaaggtgccatgcaggtgcctcccaatctccaatagtatttattcctgaaaaacacaagcaaaattagagcaatgtaaaaaatcgtgcatattcacagagaaaaaatcaaattgataatccttaccttttttttccctgtgtacatgctccgactagaagacttcgaattcctcaatagaaatcgctaacgggcatgtcatcaaagctccagaggtccatgttgctgacaacatcctgtgatccatccaggttgagaaggctatcaattgagtcaccagcaccatcatccagaaggaacctcatgtagggttctaaatcaggcagatcaacagcactgttctccataacaggagggaccattgggttggtactgctcttaatgaatgcagattcatcgacttcagctatggttgaaatgggagcaattgatgtaatatctggtgtcttggtatcattctcccagccaaagtcagagcagccaaatgagttgcttccctggtcagagttgatgatagggtcctcaataggagcagcagagttctttgcaggaacaaatggcatgttatcaggctgaacaaacggcttgtttgaagtgaagttagcagatgggtagacaaacgcatttgcattggcaagattgttgaatgctggtttgacagtaggcttctgttccacacttgacttgggtgctttagcagtggtggagccagcacgacgcttctgagcagttgttggagcctctggaaaattcaccttggccttcttgccacgaatcctgcgtgcttcagcatcataagctcttgcagcttcttcagcactgttgaaagtgccaagccagacacgaacacccttgcgaggatctctgatttcagcagcccacttaccccaagggcgctggcggatgcccctgaattggttctttctctttcttttggcagactttgcagcaggaccatcaaatccggcagtggtaatggtgctcaagttatctgcaatggaaggtcaacatcaatggcaagaaattacacagatgaacttctcttgctgatgttattttcttttggtcacaaacatgaagttggaacatgcaaccatgcgtataaacattcaaattttaggaaagcatatctcaaatcatgaaattcaagattgtaggaaaaaaaacccatgaatggacctcatcatttctgcaattgcagtctaaagttgtgctttacggactaacatcaatatgctgcagcaacattaattgtaaacaaggaacaccaaaactgagttgcaacacttcaacaaagatctgtggtttagctcacacgactgactagatacaaccgatttagacaatttacacaagaggtaacatccccataaataaaatgaactagtatgtctaagcaaaagaggccaacaaagaccacaaaaaaatgatttgacgctattgaccgaaagatagaaccaaaaacaggcaccaggacgactaaacagccaggagtatatgctaaggcatgtaggacttgacagtcaacatcataaaaatcctttacttcgactaatagttgaattacgtccggaacaatcctctcgcaatcatacaaccacatcaagcgatactagggtcatccatctaacaactaagaacccagatggggagacctccaaagagaacggagaataatttcccctttactgcgaattcaactccttggagaaaaaggtaatcatatggatagcgcaatttagaaaaagaaaaaaaaagatcgaacagtgcaagagctgaaatggcatctctaaaatcctagcagacagaatcagcacatgaagccctgatcaccacaaataagacatggaggcacatcattccaccctaaatcaccaattaaacaggagtatcaccccaaatctgatctctcaggatcaacccctaaaattatctatcccctttttttcctcccaatccatccaccgagcgtcctcgatccccaaaaaaattcccaatcggccgtagaactaacgatttacaacagcaatcaatccctgaagaacaagtaaactacacaaatcaagccgctcccagcgacgcccatacctctggagagggccctcttgaaggcggccggcttgatctcgacgacgtcatcgtcgtcctcctccccgagctccaaatccgagtccccggagtccacctcgaactcctcgaagtcggcctcgaagtcctcgtcgtcctcctccacgaaccccccgaagtggcgcctcccgccgccgccccacctgggcttcttcttctcgggccacaggagcccctccgtcgcccggcgcgacccctccgggtgccccttcaggtggtggatgatggcgccgccgcacatggctcgccgccggtgagccctcgccgccgatgcagtggtggattgcttgcggaggggggcgaaatggtaggcgagagttcgagttctctcttcttcttcttttttttccttttttttttccctcaatcggttcgacaaaatattggagagaagc
More
|
||||||||||
| CDS seq | atgtgcggcggcgccatcatccaccacctgaaggggcacccggaggggtcgcgccgggcgacggaggggctcctgtggcccgagaagaagaagcccaggtggggcggcggcgggaggcgccacttcggggggttcgtggaggaggacgacgaggacttcgaggccgacttcgaggagttcgaggtggactccggggactcggatttggagctcggggaggaggacgacgatgacgtcgtcgagatcaagccggccgccttcaagagggccctctccagagataacttgagcaccattaccactgccggatttgatggtcctgctgcaaagtctgccaaaagaaagagaaagaaccaattcaggggcatccgccagcgcccttggggtaagtgggctgctgaaatcagagatcctcgcaagggtgttcgtgtctggcttggcactttcaacagtgctgaagaagctgcaagagcttatgatgctgaagcacgcaggattcgtggcaagaaggccaaggtgaattttccagaggctccaacaactgctcagaagcgtcgtgctggctccaccactgctaaagcacccaagtcaagtgtggaacagaagcctactgtcaaaccagcattcaacaatcttgccaatgcaaatgcgtttgtctacccatctgctaacttcacttcaaacaagccgtttgttcagcctgataacatgccatttgttcctgcaaagaactctgctgctcctattgaggaccctatcatcaactctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaagacaccagatattacatcaattgctcccatttcaaccatagctgaagtcgatgaatctgcattcattaagagcagtaccaacccaatggtccctcctgttatggagaacagtgctgttgatctgcctgatttagaaccctacatgaggttccttctggatgatggtgctggtgactcaattgatagccttctcaacctggatggatcacaggatgttgtcagcaacatggacctctggagctttgatgacatgcccgttagcgatttctattga
More
|
||||||||||
| Protein seq | MCGGAIIHHLKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQKPTVKPAFNNLANANAFVYPSANFTSNKPFVQPDNMPFVPAKNSAAPIEDPIINSDQGSNSFGCSDFGWENDTKTPDITSIAPISTIAEVDESAFIKSSTNPMVPPVMENSAVDLPDLEPYMRFLLDDGAGDSIDSLLNLDGSQDVVSNMDLWSFDDMPVSDFY |
||||||||||
| Function | Ethylene-responsive transcription factor 1 [UniProtKB/Swiss-Prot:Q6K7E6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_02g0035790 | OsPr106_02g0035790.01 | Chr02 | 35420570 | 35423497 | - | NAM | ||
| CDS seq | atgtgcggcggcgccatcatccaccacctgaaggggcacccggaggggtcgcgccgggcgacggaggggctcctgtggcccgagaagaagaagcccaggtggggcggcggcgggaggcgccacttcggggggttcgtggaggaggacgacgaggacttcgaggccgacttcgaggagttcgaggtggactccggggactcggatttggagctcggggaggaggacgacgatgacgtcgtcgagatcaagccggccgccttcaagagggccctctccagagataacttgagcaccattaccactgccggatttgatggtcctgctgcaaagtctgccaaaagaaagagaaagaaccaattcaggggcatccgccagcgcccttggggtaagtgggctgctgaaatcagagatcctcgcaagggtgttcgtgtctggcttggcactttcaacagtgctgaagaagctgcaagagcttatgatgctgaagcacgcaggattcgtggcaagaaggccaaggtgaattttccagaggctccaacaactgctcagaagcgtcgtgctggctccaccactgctaaagcacccaagtcaagtgtggaacagaagcctactgtcaaaccagcattcaacaatcttgccaatgcaaatgcgtttgtctacccatctgctaacttcacttcaaacaagccgtttgttcagcctgataacatgccatttgttcctgcaaagaactctgctgctcctattgaggaccctatcatcaactctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaagacaccagatattacatcaattgctcccatttcaaccatagctgaagtcgatgaatctgcattcattaagagcagtaccaacccaatggtccctcctgttatggagaacagtgctgttgatctgcctgatttagaaccctacatgaggttccttctggatgatggtgctggtgactcaattgatagccttctcaacctggatggatcacaggatgttgtcagcaacatggacctctggagctttgatgacatgcccgttagcgatttctattga
More
|
|||||||
| Protein seq | MCGGAIIHHLKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQKPTVKPAFNNLANANAFVYPSANFTSNKPFVQPDNMPFVPAKNSAAPIEDPIINSDQGSNSFGCSDFGWENDTKTPDITSIAPISTIAEVDESAFIKSSTNPMVPPVMENSAVDLPDLEPYMRFLLDDGAGDSIDSLLNLDGSQDVVSNMDLWSFDDMPVSDFY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 20.247721 | 96.657593 | 76.174004 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0782700 | RBH | 15.189712 | 13.468544 | 39.389317 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g54160 | RBH | 9.013781 | 8.010937 | 8.853683 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0782700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0036080 | RBH | 2.729762 | 101.378654 | 39.256466 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0036180 | RBH | 0.756768 | 14.460128 | 18.421038 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0036030 | RBH | 3.555151 | 90.065979 | 49.020725 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0035610 | RBH | 0.678651 | 2.113026 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0006390 | RBH | 28.202318 | 62.874046 | 161.158401 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0543200 | RBH | 37.7651385 | 105.1041795 | 62.344086 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0035620 | RBH | 0.880685 | 7.284595 | 7.803195 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0573300 | RBH | 40.123749 | 105.856781 | 91.837364 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0035870 | RBH | 0.869190 | 1.465916 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0035680 | RBH | 2.932533 | 60.097084 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0035920 | RBH | 11.813530 | 75.234589 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0035900 | RBH | 3.675371 | 4.820998 | 8.518211 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035490 | RBH | 1.242309 | 39.879845 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G036130 | RBH | 1.274839 | 26.703045 | 20.539156 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0035870 | RBH | 4.785851 | 75.819832 | 40.730732 |
