Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_02g0021560 | OGI:02061920 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr02:23319054-23322241 | ||||||||
| Gene Symbol | OsTPS5, TPS5 | ||||||||||
| DNA seq | tcacacattgagcgggtcatgcaccacagcactcgccgctcctaacatctcctccagcgagcaataaccattggcctgcaaataggtcaggttcgccaccttgcacatgttccaaaacagatccttgcacggcctagggacaccgccgccgccgccggcggtaataaccagcctcagcagctccctcttggaggcctccacggtccgccgtatctcctccttcgccatgtccaccgacgacgccgagtgcaggtgcagcagcaggacgctgttggcgatcttgccgtcgccgctctccctcccgtacgacgccatgtcgttgaggaggcggcagcacacgttggtgagccgcatcaggccgccgtactcggggcccctgaccacctcctcggggaggagctccggccccatcaggtacagcgacgtggggacgatgggccccagcgcgaacgacacctccgccaccggcatgtactcctccatggacggcacgtgcccctctctgctccactccgcctccttcatcatcgctctcgccgtgtccagccactgcatgcattcattcattttgcaagcaacagcttaattggttaatcattagagaaaactcgatctgatcattaattaattgatccatatatgcagcatcaaggaacatgtgccttacaagttgggcaatgtggctgatgacgctgcgattttgcacctctgcagccctttctccgatcttgttgctcgtgttatacaccgcgtagaacacggtctccacatcctcggagcaaaacccgatttcgttgtgcgcatcccacctgcatatcccgccgcgatggcattaatttgctgatcatgtcatgtgttttgattaatttccagtgtaagtatatattaagagccatcggggaagattattacttttcgaataatgcgatgagattttgtagctcttcgctcgatcccgcgacatcgaacaagtcatcgactgcggttgtcagcagacagttctggatccatgcaatgcgggcatccgataattcactaggtaacacagatgaagcgaggaagaagaacacatccaatggcagtatccttagaaacttgagctggtccagccgaacctctttcacccatcttttgccaacaacaagttgcatacaacttaaaattagaatctgaacaaagtatcttcttcgcttgaatatatatatgagaatatatatagacaataacagggatgtgatagttgtatttacctatcaacatactgaagttcttgccggtaaagggattgggcagaatggaattctgcaacggccaatgctataatatcttcagcgatgtggtgcggcctgaataatatttcattacaatttcttttctaagaatatataggaatgaagtgtgcaattattaaaaggtcacactgctttgtaagactagtcaccagcctgtgcattggatgaacaattattgttgttattgtgataacaaaacttttaatgatatgctatgtgtgtgtgtgtgtgttccttattattcgaattatatatattgtggcttagacaaagaataatttgttattaattttgaattttggaattaaatcaattgccagatgttttctggttaacgtgcatggaaactttttatctcaaagtgccaaaatggtctaggcgcagatagatggatctcttacagaaatgctgattttcgcatttgaatcccgttggtgctaaattgttcgatgttcctcttgtgttctaatggttccaaaacagaagagtagaatggaagttgaagagcacattccacctgaaagtatataggaaatgctgagacgacatatacacgattattatgggaatctgaaagcgaataaacataattcagttactgttgttacctcctggggcattactgatgttgatattttgttggaacataattgctgccttagtagttcagtcgtccaagagtcaattttatccaaagtccactcatcatcaaagattcgtacctttgaagctttatacaattcaagtatagctttggtatcattcagactgccctggacgactgaatcagggaatctggattcttcagaaaagtgagctaacacatctgcaccaaagtttaagctggttggttagttagcaaattagtgttagcaaagctctcgccgtaagggcaagtgctatggtagatgtgactaccaccttcaaatttatccatatcatttattcataaattaagaggcaactcatacaatatgtcacgtctaatacacaaatacaaatgtctctaatactctcacactcttcttgaaatttgtgtggaggttacctcttaatttagaggtggctcatcatctctctcctcacttctctcttccacctcatcatttaatccaatgtgacacttttaggggcagcatatggagcattatagtacttgccctaacgaactaaacccgtacaggtaatacctgatgaaacgtcatatccatgcatacgcaggatgcgaaatgccattgcacatgtctccatgtccatgatcatctcctcgtccttttgcagccataacctgcaataatttgaacccgtgtggataaatgaaagaaaaaaaaaaagccaagtagctaggaacacgcgaggatatatatgtgatctgcaagggctgttacttgtacgccatgtccaggattcttgttatctcgcgagagaaatgacgagaaattccaaccttttcaagagtatctaccaggaatagtttggaatatgtctttgaaactgcaaattaaatgaaaattggattcagcattagatgcacacactggtggatatcagactctgtttcctactcctgatcagccacgtttattctctagataaaacgaagactcaccttctgacatcgacaacctgagtgtttctctgacggtgtttatcctgtctgtcttttctcttacttctccatcattcaggtacaccatcttgatcatttaatttcattaagattcaatacgcttatcagtatgcgactatgcgtgaataagagatgaatgttttaacagtgcatgtgtttgtagctttatatttgtatgttttatgcacgtaccttctgtcgcctgtattcatcaagtggctgtttgcttgtatctatcccccgtgtgttgctgtgtaccttgcacc
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| CDS seq | atggtgtacctgaatgatggagaagtaagagaaaagacagacaggataaacaccgtcagagaaacactcaggttgtcgatgtcagaagtttcaaagacatattccaaactattcctggtagatactcttgaaaaggttggaatttctcgtcatttctctcgcgagataacaagaatcctggacatggcgtacaagttatggctgcaaaaggacgaggagatgatcatggacatggagacatgtgcaatggcatttcgcatcctgcaatccagattccctgattcagtcgtccagggcagtctgaatgataccaaagctatacttgaattgtataaagcttcaaaggtggaatgtgctcttcaacttccattctactcttctgttttggaaccattagaacacaagaggaacatcgaacaatttagcaccaacgggattcaaatgcgaaaatcagcatttctgccgcaccacatcgctgaagatattatagcattggccgttgcagaattccattctgcccaatccctttaccggcaagaacttcagtatgttgatagatgggtgaaagaggttcggctggaccagctcaagtttctaaggatactgccattggatgtgttcttcttcctcgcttcatctgtgttacctagtgaattatcggatgcccgcattgcatggatccagaactgtctgctgacaaccgcagtcgatgacttgttcgatgtcgcgggatcgagcgaagagctacaaaatctcatcgcattattcgaaaagtgggatgcgcacaacgaaatcgggttttgctccgaggatgtggagaccgtgttctacgcggtgtataacacgagcaacaagatcggagaaagggctgcagaggtgcaaaatcgcagcgtcatcagccacattgcccaactttggctggacacggcgagagcgatgatgaaggaggcggagtggagcagagaggggcacgtgccgtccatggaggagtacatgccggtggcggaggtgtcgttcgcgctggggcccatcgtccccacgtcgctgtacctgatggggccggagctcctccccgaggaggtggtcaggggccccgagtacggcggcctgatgcggctcaccaacgtgtgctgccgcctcctcaacgacatggcgtcgtacgggagggagagcggcgacggcaagatcgccaacagcgtcctgctgctgcacctgcactcggcgtcgtcggtggacatggcgaaggaggagatacggcggaccgtggaggcctccaagagggagctgctgaggctggttattaccgccggcggcggcggcggtgtccctaggccgtgcaaggatctgttttggaacatgtgcaaggtggcgaacctgacctatttgcaggccaatggttattgctcgctggaggagatgttaggagcggcgagtgctgtggtgcatgacccgctcaatgtgtga
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| Protein seq | MVYLNDGEVREKTDRINTVRETLRLSMSEVSKTYSKLFLVDTLEKVGISRHFSREITRILDMAYKLWLQKDEEMIMDMETCAMAFRILQSRFPDSVVQGSLNDTKAILELYKASKVECALQLPFYSSVLEPLEHKRNIEQFSTNGIQMRKSAFLPHHIAEDIIALAVAEFHSAQSLYRQELQYVDRWVKEVRLDQLKFLRILPLDVFFFLASSVLPSELSDARIAWIQNCLLTTAVDDLFDVAGSSEELQNLIALFEKWDAHNEIGFCSEDVETVFYAVYNTSNKIGERAAEVQNRSVISHIAQLWLDTARAMMKEAEWSREGHVPSMEEYMPVAEVSFALGPIVPTSLYLMGPELLPEEVVRGPEYGGLMRLTNVCCRLLNDMASYGRESGDGKIANSVLLLHLHSASSVDMAKEEIRRTVEASKRELLRLVITAGGGGGVPRPCKDLFWNMCKVANLTYLQANGYCSLEEMLGAASAVVHDPLNV |
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| Function | Dolabradiene synthase KSL4, chloroplastic [UniProtKB/Swiss-Prot:A0A1D6KUI6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_02g0021560 | OsPr106_02g0021560.01 | Chr02 | 23319054 | 23322241 | - | NAM | ||
| CDS seq | atggtgtacctgaatgatggagaagtaagagaaaagacagacaggataaacaccgtcagagaaacactcaggttgtcgatgtcagaagtttcaaagacatattccaaactattcctggtagatactcttgaaaaggttggaatttctcgtcatttctctcgcgagataacaagaatcctggacatggcgtacaagttatggctgcaaaaggacgaggagatgatcatggacatggagacatgtgcaatggcatttcgcatcctgcaatccagattccctgattcagtcgtccagggcagtctgaatgataccaaagctatacttgaattgtataaagcttcaaaggtggaatgtgctcttcaacttccattctactcttctgttttggaaccattagaacacaagaggaacatcgaacaatttagcaccaacgggattcaaatgcgaaaatcagcatttctgccgcaccacatcgctgaagatattatagcattggccgttgcagaattccattctgcccaatccctttaccggcaagaacttcagtatgttgatagatgggtgaaagaggttcggctggaccagctcaagtttctaaggatactgccattggatgtgttcttcttcctcgcttcatctgtgttacctagtgaattatcggatgcccgcattgcatggatccagaactgtctgctgacaaccgcagtcgatgacttgttcgatgtcgcgggatcgagcgaagagctacaaaatctcatcgcattattcgaaaagtgggatgcgcacaacgaaatcgggttttgctccgaggatgtggagaccgtgttctacgcggtgtataacacgagcaacaagatcggagaaagggctgcagaggtgcaaaatcgcagcgtcatcagccacattgcccaactttggctggacacggcgagagcgatgatgaaggaggcggagtggagcagagaggggcacgtgccgtccatggaggagtacatgccggtggcggaggtgtcgttcgcgctggggcccatcgtccccacgtcgctgtacctgatggggccggagctcctccccgaggaggtggtcaggggccccgagtacggcggcctgatgcggctcaccaacgtgtgctgccgcctcctcaacgacatggcgtcgtacgggagggagagcggcgacggcaagatcgccaacagcgtcctgctgctgcacctgcactcggcgtcgtcggtggacatggcgaaggaggagatacggcggaccgtggaggcctccaagagggagctgctgaggctggttattaccgccggcggcggcggcggtgtccctaggccgtgcaaggatctgttttggaacatgtgcaaggtggcgaacctgacctatttgcaggccaatggttattgctcgctggaggagatgttaggagcggcgagtgctgtggtgcatgacccgctcaatgtgtga
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| Protein seq | MVYLNDGEVREKTDRINTVRETLRLSMSEVSKTYSKLFLVDTLEKVGISRHFSREITRILDMAYKLWLQKDEEMIMDMETCAMAFRILQSRFPDSVVQGSLNDTKAILELYKASKVECALQLPFYSSVLEPLEHKRNIEQFSTNGIQMRKSAFLPHHIAEDIIALAVAEFHSAQSLYRQELQYVDRWVKEVRLDQLKFLRILPLDVFFFLASSVLPSELSDARIAWIQNCLLTTAVDDLFDVAGSSEELQNLIALFEKWDAHNEIGFCSEDVETVFYAVYNTSNKIGERAAEVQNRSVISHIAQLWLDTARAMMKEAEWSREGHVPSMEEYMPVAEVSFALGPIVPTSLYLMGPELLPEEVVRGPEYGGLMRLTNVCCRLLNDMASYGRESGDGKIANSVLLLHLHSASSVDMAKEEIRRTVEASKRELLRLVITAGGGGGVPRPCKDLFWNMCKVANLTYLQANGYCSLEEMLGAASAVVHDPLNV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0568700 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g36020 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0568700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0021800 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021900 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0021910 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0021590 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0355200 | RBH | 0 | 0 | 0.020901 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0021290 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0382300 | RBH | 0.01433 | 0.0518615 | 0.0556665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0021730 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0021470 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021930 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0021630 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0021460 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G021910 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0021680 | RBH | 0.0 | 0.0 | 0.880165 |
