Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_02g0012290 | OGI:02029560 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr02:10387961-10394376 | ||||||||
| Gene Symbol | TMS10, OsSERK4, OsSERL9, OsSERK2, OsBAK1-5, OsTMS10, SERK4, SERL9, SERK2, BAK1-5, OsBAK1, BAK1 | ||||||||||
| DNA seq | aaataaaggaaaaaaaaaacactcgagaagttcttctccttctcctctttccccttcctctcgccgccccaaatcacccgcccaccaaaaccctcgccgcggcctccgccgccgcgggattccggccaccaccagcagccgccgcggccaccggggcgccctcctcctcctgcccgccggcaccggcgaccgaccatccccttgccccgttttcccgtcgggttgtgaggcgagatgagggagctgcgcgtcgccgtcctcatcatcgcggtctcgctgccgtccttctccgcgtccgaccgccaaggtaccttagcttttttctgctcttccgaccccagtcgcctcgcctgcgacgccccacggttgtctcctccgagcttctgtgtagtatagtgtagtgtagtactgtagcttcaattttcgcatcgtagattaccgaacgccttgttggattacatgccgtggcacactgtcccgatggtagcgaagtgggtaaccagatgccatgtggaattgctgtattgatttccaacgctacagagcttaggttaccttcaattgataatacatagcacaccttgcagtaggtactactgcttgctttcgttttgttagcctggaactactgctttggtcgaaacttgccttaaatgtgaacgtactgctagttgctgagtccaaacaaagggaaaaaaaggcgccaacgtgctaactaatgcttcgttggctgacgtgggcgcctgcgcaccagtctaaatctaaaggtttatccaaaaatagcatggatttgaaaatgctgcatattttgagatattaagaaattgcggaaagtaggcacatgttttctcaaaactttggaactgtcaaggtttttatcctgaaatgactgtttttgtttatattgatggcttcactgcagcattaatgttatgtgataattgcatttttggaattgtgtctgggaaatacatgtggtggatgcaagaatacatattacactctttgaatccccatatgttatatagtaagaatattctttatttgccctacaagttagtaacttaccttatttgctcctatgaatgttcccctgttgaccacttaaactcagtttatgccccttattattgaccctcccaccaccctcctgtaactgttctgtgaactacgatggaacatgtcaattttgcccttcttccccctcaatcccttcattgtcatcttatatatcttcattggacggcatttccccatcttgtcttctgctggtaccgtggacgggaggctaattggccaaagaagagggaggcagcagacaaacagagatcatcaaagctgtccgtctcactcaaatctgccatccccaccattcgtcgagctcacgacaccattttttcactgggccactggagctcatgacaccatgactgtccttccatggcctaccacctttgtggagattacgacagttttgtggccctacctagtctttcccaagctcacagcatccatggctagtgtcatcagatcttgccacagacatactgctctgtctttcaccaatctcttgactgccacagccctcttgccataaacaaaaatgtgatttgctgcaatttacagattacagagagagttatggagaagattagatcaacatggaaatcaggcctatacggaaacatgggatctatctattctaaattcctaaccatttttcccctaatagtggaaatcaagtaaaatgcaagtgcccttattgttgccggatggaagaaaccagatgggagagagaaaaaagtgagagtgaaaaggaaaaggtgaggaaggaaaagaagaaactgacagtggccaggatcaggggtacaactgctatatgagcaaaatagtgagaagaatattcgattaactgtatagcatactaacagaatgtaactggaaggggaaaagaggagtgaaagttgagttggcaaatgagggattatagtttctgtaaggggaaatgaaaagaattttctctacagagtgaaaagacgggcaacaatattcatattagatgcccctatcatgcgagcttattattacttgaaaatttattcctcattttcatgagtggcgaatctttggttggcactaactttggtgtaatcctgaggtattaaattagttgatgaacatagagtaacttgttatttatcctctggttctcaaaaaccttttgtatgttttaccaggagatgccttatatgatatgaaacaaaaactgaatgttactggcaatcagctttcggattggaaccaaaatcaagtcaacccttgtacatggaattctgtaatttgtgacaataacaacaatgttattcaagtgtaagttggagctcatgcaccttctcatcttgtacacttaaattttatactgattcccacctctgctctttgtcctgtttgttttcattttttatgataatgctttcctacagaacattggctgctcgtggatttgctggagttttgtcaccaagaattggagaactgaaatatttgactgtcctgtgagtacattattctattatgtagattaataatacttgggaattcaatatatgagtgttcaataaatggttatgaagttggtaggaaaaccacaatctatactaaattaagagaaaaatattttctcaatacttgaaagtatttctgtaatttgaaaactataaataggtggcatgagtaattccaacaagtttgtgctgaccccagaaactgttgctaatattgctttcagttcctctatttaatccctttttaaaaggcaaacactaaggtagaaccctactggaaaatcattggatcaaaataaaataaatatgcaatcaaaaagttaaaaaaatcaagaagtccaagcacccaactctgcaagatctgcacaaaatcttaaggtaaattctatggagttctgttccttgtagtttttctcctgtgctttcttgttgattggggttaactgtagtttcatgacaggtctgagttcaactgattttttcagtataaaagatcaatttctgctaaccagtaaccttaaaaccatttttaactgagagaaatgcattgtaccaatgttacaactgctaattcttgattttgaaaggtggtgtgagtatgtttctgtgtcctgcatgaactgatggttaggttaagtgcaatatgattctcctgtcgattctctccaactattatgaaatgctgttgtgtatgatcttgcaggtccttggctggtaataggatttccggtggcataccagagcaatttggtaatctttctagtttgacaagcttagatttagaagacaaccttttggtgggagaaataccagcttctcttggccagctttctaagctccagttgttgtaagtatatctgcatttcatcactcttcttttggtgcatacaatcaaaatgattcatcatttttcatgctttctgtcctttttgtcacctaaccaggatacttagtgataataatttcaatggatcaattcctgacagtctagcaaaaatctcaagcttgactgacatgtaagagtatacatcttggctaagtatgatctcttttttaaaatttctgtttctgctaacactagttcatcttccatttgttgacaaacaacttttttttttatggcagccggctggcgtacaataatctgtctggtcagatacctggtccgttgttccaagtagcacgttacaagtatgtcaagatctctctaaaaacagtttaatccaattttttttaaaacctgagtgactgatgaaggttcaattttcatgaatagcttttctggtaatcacttaaattgtggaaccaacttcccccactcttgctcaaccaacatgtcctaccagagtaagttaaatcctcattagtttatttatatatttactgatacggagtttgtctcctagaaaagatgtcaccttataattctctactatttcttaattgttctagaatttttcatattacagatggatcccatagctcaaaaattggcattgtacttggaacagttggaggagtaataggacttctcattgtagctgctctctttctgttctgtaaagggaggaggaaaagccatctgcgggaagtttttgtggatgtagcaggtatttgttttcatgttcttgtagttgatttgtttttagtacctgcatctatcatcagtttttgtggttgtggcaggttacttcttttgtggctttgtggttaggtttattagttcctgcataattatttctcttgctaatgtctcctggttacacaaatgctacatgttcttgtgtaaattgtaacttatcaaacaaccaaaacaagcaggtgcacctatttgtgacctcagtttgataagtgtgtgatttataccttaatctttttttctaaatagaacatgtgaaggtatctctgtgatttatacctagcttcatgtttgcttgacagtgtgcattgaacgaagtaatgtaaaaaaattgtgattcacaggtgaggatgatcgacgaattgcatttggccagctcaagagatttgcatggcgagaactacaaatcgcgacggataatttcagtgaaagaaatgttctcgggcagggaggttttggtaaagtttacaaaggtgttcttccagatggtactaagattgctgtaaaacgattgactgattatgaaagtcctggtggtgaggccgccttcttgcgtgaggtggagctgattagtgttgcagttcaccgcaatcttctaaaattgattggcttctgcacaacacaaacagagcgcctcctggtatatccattcatgcagaatttgagtgttgcctaccgattgcgaggtatcaatatcgtacttctccatccctaatgccctattgccttataaagtttgcttaaatgtgctgctattattatttggagtatctgtgaacagaattttgtcatttgcttaatttacggttacagatggtgggcattaagtttttcagtttaatattttaaataaacctcaagtcatgcactcatgtggttgatttgtattttctatagacttgaaaattgataaaattaatttaacctttatagttatttggtgtgagcttcatggcatattgtttgttgtgttgaaatcaatgcagattttaaacctggagaacctgtcttaaactggccagaaagaaaacgggtggccattggtacagcacgtggactagaatatctgcatgaacactgcaacccaaagatcatacaccgtgatgtcaaagcggcgaatgtcttgcttgatgaggactttgaacctgttgttggtgattttggactagcgaagctagtggatgtgcagaagacatctgtcactacccaagtccgtggaacaatgggtcacatagcacctgaatatctatccacagggaagtcatcagagagaactgatgtttttggctacgggatcatgcttcttgagcttgtgactggccagcgtgccattgacttctcacgcttggaggaagaggacgatgtgctattgctcgatcatgtaaggcttatttactcgaccatgttccttgggaaatttttggaaactgtgtccttacatggtgcttgttctccttttaggtaaagaagctacaaagagaagggcagctaggatccattgtggaccgcaacctgaaccagaattatgacgacgaggaagttgagatgatgatacagatagcattgctgtgcacacagtcatcgcctgaggatcggccatccatgtcagaggtggttcggatgctagaaggcgaggggctggcggagcggtgggaggagtggcagcaggtggaggtgacaaggaggcaggagtacgagcggatgcagcggcggttcgactggggagaggactctgtctacaaccaggaagcaatagagttgtctggaggtagatgacaagggctgtgacaacggacatcaaacaaacggcgtaagccgaatctgtactttttctgtaatggatgtagcgttgttctttgtagagtagatatcgtagatagaattgtcatggaacaacagcgtaagcgatagctggtaaatgatacaatcggatggataatgatatgatagaaaaataaagttgtatgtgtttggttgggcatggctgaacctgagcagttgtgtgctccccatgcactgttatcaagtcgcccgattagtcgtaaagtcggtcaagttagttgactaaagagccatgactcgaccaaatagcaagtcatgcgattggtcgtagtaagtcgtggttagtcgtaaagtcggtcgtaaattagtcgtgattattgtagcaaatcaccaattcaccgtgctaattggcttattgtgtttagtatttt
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| CDS seq | atgagggagctgcgcgtcgccgtcctcatcatcgcggtctcgctgccgtccttctccgcgtccgaccgccaaggagatgccttatatgatatgaaacaaaaactgaatgttactggcaatcagctttcggattggaaccaaaatcaagtcaacccttgtacatggaattctgtaatttgtgacaataacaacaatgttattcaagtaacattggctgctcgtggatttgctggagttttgtcaccaagaattggagaactgaaatatttgactgtcctgtccttggctggtaataggatttccggtggcataccagagcaatttggtaatctttctagtttgacaagcttagatttagaagacaaccttttggtgggagaaataccagcttctcttggccagctttctaagctccagttgttgatacttagtgataataatttcaatggatcaattcctgacagtctagcaaaaatctcaagcttgactgacatccggctggcgtacaataatctgtctggtcagatacctggtccgttgttccaagtagcacgttacaacttttctggtaatcacttaaattgtggaaccaacttcccccactcttgctcaaccaacatgtcctaccagaatggatcccatagctcaaaaattggcattgtacttggaacagttggaggagtaataggacttctcattgtagctgctctctttctgttctgtaaagggaggaggaaaagccatctgcgggaagtttttgtggatgtagcaggtgaggatgatcgacgaattgcatttggccagctcaagagatttgcatggcgagaactacaaatcgcgacggataatttcagtgaaagaaatgttctcgggcagggaggttttggtaaagtttacaaaggtgttcttccagatggtactaagattgctgtaaaacgattgactgattatgaaagtcctggtggtgaggccgccttcttgcgtgaggtggagctgattagtgttgcagttcaccgcaatcttctaaaattgattggcttctgcacaacacaaacagagcgcctcctggtatatccattcatgcagaatttgagtgttgcctaccgattgcgagattttaaacctggagaacctgtcttaaactggccagaaagaaaacgggtggccattggtacagcacgtggactagaatatctgcatgaacactgcaacccaaagatcatacaccgtgatgtcaaagcggcgaatgtcttgcttgatgaggactttgaacctgttgttggtgattttggactagcgaagctagtggatgtgcagaagacatctgtcactacccaagtccgtggaacaatgggtcacatagcacctgaatatctatccacagggaagtcatcagagagaactgatgtttttggctacgggatcatgcttcttgagcttgtgactggccagcgtgccattgacttctcacgcttggaggaagaggacgatgtgctattgctcgatcatgtaaagaagctacaaagagaagggcagctaggatccattgtggaccgcaacctgaaccagaattatgacgacgaggaagttgagatgatgatacagatagcattgctgtgcacacagtcatcgcctgaggatcggccatccatgtcagaggtggttcggatgctagaaggcgaggggctggcggagcggtgggaggagtggcagcaggtggaggtgacaaggaggcaggagtacgagcggatgcagcggcggttcgactggggagaggactctgtctacaaccaggaagcaatagagttgtctggaggtagatga
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| Protein seq | MRELRVAVLIIAVSLPSFSASDRQGDALYDMKQKLNVTGNQLSDWNQNQVNPCTWNSVICDNNNNVIQVTLAARGFAGVLSPRIGELKYLTVLSLAGNRISGGIPEQFGNLSSLTSLDLEDNLLVGEIPASLGQLSKLQLLILSDNNFNGSIPDSLAKISSLTDIRLAYNNLSGQIPGPLFQVARYNFSGNHLNCGTNFPHSCSTNMSYQNGSHSSKIGIVLGTVGGVIGLLIVAALFLFCKGRRKSHLREVFVDVAGEDDRRIAFGQLKRFAWRELQIATDNFSERNVLGQGGFGKVYKGVLPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLKLIGFCTTQTERLLVYPFMQNLSVAYRLRDFKPGEPVLNWPERKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEPVVGDFGLAKLVDVQKTSVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREGQLGSIVDRNLNQNYDDEEVEMMIQIALLCTQSSPEDRPSMSEVVRMLEGEGLAERWEEWQQVEVTRRQEYERMQRRFDWGEDSVYNQEAIELSGGR |
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| Function | LRR receptor kinase SERK2 [UniProtKB/Swiss-Prot:Q6K4T4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_02g0012290 | OsPr106_02g0012290.01 | Chr02 | 10387961 | 10394376 | + | NAM | ||
| CDS seq | atgagggagctgcgcgtcgccgtcctcatcatcgcggtctcgctgccgtccttctccgcgtccgaccgccaaggagatgccttatatgatatgaaacaaaaactgaatgttactggcaatcagctttcggattggaaccaaaatcaagtcaacccttgtacatggaattctgtaatttgtgacaataacaacaatgttattcaagtaacattggctgctcgtggatttgctggagttttgtcaccaagaattggagaactgaaatatttgactgtcctgtccttggctggtaataggatttccggtggcataccagagcaatttggtaatctttctagtttgacaagcttagatttagaagacaaccttttggtgggagaaataccagcttctcttggccagctttctaagctccagttgttgatacttagtgataataatttcaatggatcaattcctgacagtctagcaaaaatctcaagcttgactgacatccggctggcgtacaataatctgtctggtcagatacctggtccgttgttccaagtagcacgttacaacttttctggtaatcacttaaattgtggaaccaacttcccccactcttgctcaaccaacatgtcctaccagaatggatcccatagctcaaaaattggcattgtacttggaacagttggaggagtaataggacttctcattgtagctgctctctttctgttctgtaaagggaggaggaaaagccatctgcgggaagtttttgtggatgtagcaggtgaggatgatcgacgaattgcatttggccagctcaagagatttgcatggcgagaactacaaatcgcgacggataatttcagtgaaagaaatgttctcgggcagggaggttttggtaaagtttacaaaggtgttcttccagatggtactaagattgctgtaaaacgattgactgattatgaaagtcctggtggtgaggccgccttcttgcgtgaggtggagctgattagtgttgcagttcaccgcaatcttctaaaattgattggcttctgcacaacacaaacagagcgcctcctggtatatccattcatgcagaatttgagtgttgcctaccgattgcgagattttaaacctggagaacctgtcttaaactggccagaaagaaaacgggtggccattggtacagcacgtggactagaatatctgcatgaacactgcaacccaaagatcatacaccgtgatgtcaaagcggcgaatgtcttgcttgatgaggactttgaacctgttgttggtgattttggactagcgaagctagtggatgtgcagaagacatctgtcactacccaagtccgtggaacaatgggtcacatagcacctgaatatctatccacagggaagtcatcagagagaactgatgtttttggctacgggatcatgcttcttgagcttgtgactggccagcgtgccattgacttctcacgcttggaggaagaggacgatgtgctattgctcgatcatgtaaagaagctacaaagagaagggcagctaggatccattgtggaccgcaacctgaaccagaattatgacgacgaggaagttgagatgatgatacagatagcattgctgtgcacacagtcatcgcctgaggatcggccatccatgtcagaggtggttcggatgctagaaggcgaggggctggcggagcggtgggaggagtggcagcaggtggaggtgacaaggaggcaggagtacgagcggatgcagcggcggttcgactggggagaggactctgtctacaaccaggaagcaatagagttgtctggaggtagatga
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| Protein seq | MRELRVAVLIIAVSLPSFSASDRQGDALYDMKQKLNVTGNQLSDWNQNQVNPCTWNSVICDNNNNVIQVTLAARGFAGVLSPRIGELKYLTVLSLAGNRISGGIPEQFGNLSSLTSLDLEDNLLVGEIPASLGQLSKLQLLILSDNNFNGSIPDSLAKISSLTDIRLAYNNLSGQIPGPLFQVARYNFSGNHLNCGTNFPHSCSTNMSYQNGSHSSKIGIVLGTVGGVIGLLIVAALFLFCKGRRKSHLREVFVDVAGEDDRRIAFGQLKRFAWRELQIATDNFSERNVLGQGGFGKVYKGVLPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLKLIGFCTTQTERLLVYPFMQNLSVAYRLRDFKPGEPVLNWPERKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEPVVGDFGLAKLVDVQKTSVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREGQLGSIVDRNLNQNYDDEEVEMMIQIALLCTQSSPEDRPSMSEVVRMLEGEGLAERWEEWQQVEVTRRQEYERMQRRFDWGEDSVYNQEAIELSGGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.466344 | 23.861444 | 11.515642 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0283800 | RBH | 1.458340 | 1.071969 | 4.303871 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g18320 | RBH | 0.967757 | 0.707501 | 1.087175 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0283800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0012520 | RBH | 0.715820 | 14.309228 | 6.061122 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0012700 | RBH | 0.354505 | 3.862157 | 2.616108 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0012540 | RBH | 1.646717 | 7.481727 | 6.849147 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0012370 | RBH | 0.247225 | 0.484472 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0031090 | RBH | 5.497243 | 26.904888 | 17.691984 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0164500 | RBH | 7.30757 | 25.1505215 | 22.7769115 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0012090 | RBH | 0.353927 | 0.964550 | 1.449083 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0178200 | RBH | 9.981467 | 32.370039 | 17.6869155 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0012650 | RBH | 0.235816 | 0.535099 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0012250 | RBH | 0.550826 | 24.444281 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0012690 | RBH | 5.131960 | 35.276028 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0012520 | RBH | 0.392100 | 1.128023 | 1.310350 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0012330 | RBH | 0.383401 | 5.981086 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G012680 | RBH | 0.574370 | 4.090336 | 3.175601 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0012450 | RBH | 2.201854 | 10.737507 | 6.382476 |
