Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_02g0005980 | OGI:02013320 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr02:4248105-4255375 | ||||||||
| Gene Symbol | GL1-2, OsGL1-2, WAX2, OsWAX2 | ||||||||||
| DNA seq | caaaccaagagatgctatagggagtttgattaaattttaattaatttaaatcccacggcaaatcgtttttttctcgtacatttcttctatcttacagcacaccaaatcccacaagatcgccggccgttctcattggcttcgccgctggcctccggcggcggcggtcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgacgtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggcgtggcacgcgtgcaccaccccgcgttccatcgtgtactgcacacatatgtttcccggcgatcgccggccgaccatgtcagcgaactcggagaagaagaatataataataataataatggacataatttttctataaatttagttgaatataaaaagagttttgttataaaaaaagtttaaagtgacttgtaatatgaaacggaggaagtacctcgcagtagccgaggccctggacgtccttggggagcctcatggcggcgagcttgccgtaggtgcagtctcgccggaacccgatgatcggcggcaccacgaactggtggaagtgtgtccccgccggcgcccacctctgctccctcggcgacagccacttccccaccagccacgtctgcaacaacgccatccatctaactttagcttctgataaattttacggtatttgaaaaagtaacccgggatacttaaatcttacattaaaaaaatttagtatcttgagatacctagtattcggaagtactaaattttacatcagaaaatacggtaaatttcgggtaccttcttagatggtaaaattaccctcagcttttccgtcgaactagctagtacatacaacttggcgccataaatatagctagacccaaaataaacactaaactaaacttttggtgatctggtcggtgcatacaactgagacaaaaaaaatgtaactttttctgggttaattggtcagcgggacaatatgactctgacaaaagtctatgttttataggttaactggttggtggataaaacctgatgaaagaaaatgtggacaatcacatcatggacacagccttgaattactgaaagtcttattgaaattccagcgagtgaattaccttgcagttttgtgcaggctggtacttcgtgacctgcacgaggtactgctggaactctgccggtgcttccctctgaatcttcagaaacctctccgacgacaatgtcaacatctaaaaccaaaaaagattagcacacagaaccatcaatcccagtcttgcaatcatcctcttgtttaacatactcatctaatcatgctgtgaattaacacagagttttttttctccttttttggggttcagttcagagttcagacaggcagcagagcacgaaccaggactctgatcttttttctgcagaggtagagggcgatggctctgccgagcttggaggtggcgccggtgaggaagacgtccttgacgttgctggggatctcgttgaggatcacggccgccgtcagggtgttgccgtgcaccaccctcaccctcagctccgggtgcttgttcacgaacagcgtgccacctccattcagggcctcgttctgacagaaacaagaaaccaaaccaaaacataagaaaattcaaagagtttcagttaagatcagatcgtttcactgcattttgatttttgagtaatgctagattgctagcctaaagattctgtttacagtgctgatcagatgaaattcctgaactttttaactgtctgaacaattaacgcagattttttagttatgagctagccacagcatctactccgattacacgcgtcacggtcgcatttccatcttcgccgccatttcaacgtcgaatcagttaaggatttcacatgcccatcataaatgatgatgaattggttccggtagtctgtgctagataaccaatgctgcccaactgtatgggcgacacatgaacagcaaagagactgacatgaacatcacatactctctttttttttccttttttttcttttgaaaatgacagggagaaagttgaagaaagatgaggaaaaacagaacacccctactgaatcatcagcagtgatactgtactagttaatggacaagtatcttattatacatgctgtatatccaatactgctcaactatatgcataacacggcacattatgatcaaagaaagagacatgtatgtgtctgtgtcattgcaagaaagtgataaaggaaaaggaaaaaaaagttgaggcatggaagagacaagacatgtacaggtagcaaatattaaatatacataaattattggactattattatattatctatatgattatatacataaattaaatgttttaataaataaatatttaaaaaatgtattcttggtgacttgaataaataaataaataaataattcgtgataataatcgatcttttgtaaaacaactgaccttattgagagcggcgaggctgagcaccttgacgcccatccgatctgcacgcaggatggccagctcgatctgctcgttgatgcctttcttcgccgccggtatgaagtactgtgcatttgcatacatggcgccaatgtcagaatcaattcacaagttcagatggcctacacaaaaccgaatcacatgcagttttctatagggactgcaaagttaaagccacacattaaccactgttgtcactactgtactgtacaagtacttgcgagagaggtgccattgaatagtatggtaccacaacacctctaccaattaattgatggacaacctatgatccatccatgatatctcagttgtcctctcgatacagtcagtacgagggtgtttaaattcaggggtgtaaagttttggcgtgtcacatcgggtattatatagtgtgtcgtatggggtgttcgggcactaataaaaaaaataattacagaatccgtcagtaaactacgagacgaatttattaagcctaattaatctgtcattagcacatatttactgtagcaccacattatcaaatcattgagcaattaggcttaaatgatctgtcttgcaaattagtcgtaatttatgcaattagttatttttttaagcatatatttaatacttcatgcatgtctttagacgttcgatgtgacggggtgaaaaatttacggtgggatcacatactaattctaaaatattgtctcatgttataccgacatgagatatgatacaattttaaattattctggaattaagttaggcgagaagagagggggggggggggggggggttattgtgattatacctgaaacccatatcgggggacagtccacatctggtggaggttgccgcggaggcggtaggagctgacgaggaaggtcttggagcagcaccacatgagcagcatgaagccgaaggcgaccggccaaaacgggaggaggacgaagtggttggcgaacggcgtcgagctgcacgaccggagcacgaacggcacgtgcatcgacgccatgatgtccaccacgtgtgccaggaacacgaagtccggcgcctgatcgttcttgcctacatcaacaattgccatttttcgcgaaataatattattataaaaccgtcaagctctcgatagtgaaatgataatagatgtgtgatttcaacccttgaggtcatgtgttcaatccccgcacgctcataatttcttctttaaaaaagtttttttattgtaaaaatattcaagatttttggggcttgggaattttgcatgaattaattctaaatgttaatgtctggagcaatgtctctccctccaaatctctttgttttaattgtaaaaagtcttcaagatttttggggcttgggaattttgcaggaatcaattccaaatgttaatgtttcttatgggtcttgtagcacactgactgaatataattcttgtttcttgaagcaaaaggcataataaaatgcactaattaggcgtgcaccctacctaagtagacctccttttgcagctcccatgacttgtggttgagggtgccccccaggagatcaaaaataggcatgaacaggcagaagtttgagtccttctccctgtggtgcaggctcaggtacctgcgcaattaaatccatatgcataacgcattagaacaatcaaatcgattttaattacttgtatcacctcttcatacaacaccgactaattaatcaacttttctctaacaaccaattagcagtacagctaacaacactaggatagtgaccaaatgacagatgcaattaagcagatagcagcacagtccatacaatgaagtgcagcataattagtactacttgtatctcaaccttataaagtagttatttatttatttaactaactgtcttagacaaaaataatttacttattttctccattttacaatatatgataattttgaccttgcattgttttagtccgatcactcctattttaaaaataaactggtagctattaaaaaatataagcatataattcccattaattgaatcaaacgatttacaagatatcggtggtcaactaaaataattttcaatccaatttaccaaaagttatgaatagagaagtatttatcagaaaacaaatacattatactattattttatttttgcactcacgtaggggtgtagatgaggtatctgagaagaggaacagcctggaagaccctaggggatatcacctccacgttactgtagcccatggacctcaagaagtcaaacaaaaggacgtgtccatagaccaggcccacggaccctacccccatcagaaaggcccctgcgagtgggacccctatcaccaccgtcagcaggaggctctccagtggcgtcccaaatccagctgcagaccaacgtaacacaggaaaagcttatcatcagccagtcaaaattgtactcctacaacgctataaccgtataaccgtatgagacgtataattaaaaataaattatagataaaatatttatatctacaatgctaaaatatatataaaaaaatcttgctaaaatatggatcacgattaaaaaaacttaaaatcaacttcataattacgttttaaaattaaaatttcaggctagtctcgattaatttaatctgcataaattgtaccactctgatgggttaatcaatgtagaaatactagctccatattttaatgtatgacgcagttgactttttatccaacgtttgaccattcgtcttattaaaaaaaaatttatgcaattttcatttattttattgtgactagattcatcatcaaatgttatttaagcatgatataaatattttcatatttgcatgaaaattttgaataaaatgaatgttcaaacgttagtcgaaaagtcaacggcgtcacacattaaaatacggagggagtatgaatgaagcagaaaaaagaataatctatgcataaaattttatatttttattgtttattgtttaaaagtcaatgctagaaaaaacaaactacgacaaataaaacacttcaaaatctatcccaaaaccaacattaagtttcaaaatatctgctgcaactcattaagacaacaaaacatcatacataaactggttcacagttccaacgagaattttcaaaacaaatttggtacaccaaacagttcatagataggaataaatacactccctttttatactcctaaactttgttgggtgagtatggtatggagtacaagacatgatgagtacaggtgtagagtacctgtcaagggtgtggtgaccgaggcgtggtggtgagcggcgtggtagcggctgaagagtggggcccggtgcagggcccggtgggcccagtaaaagagcggctcagcgaccaacacatgcagcagcagcgcgatggcccacccgcgtgggtcccacgcttgcttcaggcttgggagcagcagctgctgccgcgccaccgccgggctccccaccaacgttgcccctatcagcgtctgcagcagcagaaagttatccctgcatatatatgcaaaataatcccatcaaaaaaagaaaaacacatattgctacctccgttctaaaatataagtgttgccgtggatatccgtttctaacatttaaccgttcgtattatttaaaaattttataaaataattagtcacatataaaattcatgttttatcatctaataaataaaaataattaaaaaattaaataagacgaacggtcaaacgttggataaggatagtataaaactaaacttattttagaattgagggagggaggactacataaaacagattcattcttaattttactgctggtgctggtttaagcagtaaaaatggtgacatatatgagtagtaattacgatgattctagataagagagcagccatggcgtctgtctgtctgaactcttctgaaggctgaagctgggatctgatctaacagtggatgactggatggtacagtactgtctctgggcttggtgaccactgcttgcattggatgcaaagccatattttctccctctcaaaaaaatcaatctaaaaatgaataggacacaaatgcacgccgtcggcgaccggccggcgactagctagctacggcggaggagaatgagatagatagagagagagacggcgaagggcgtaccagtcccattcggcgtcgacctggcggaagtcgacggagtcggggacgacgcggcggcggcgggtgaagaagagcatgttgccgtaggagaaccagaactggtaggtgagcccgcgggcggcgaacagcagcagcaggtggagccaccacgaccccaccggcgccgccccttgctgcctccactcctccgccaccttccacaccaccgccccgtacaacacatactgcacccatctcccattaattaaccacgcacacgttaattagcttaataaggtagaagaagaagaagaagaagaaactaacaaagagagattaattgacgacttaagagagagattatatgcatgccttgtacgagccgaggcttgcccatggccacgacgagagaggaggagcagccatggctgcttgcttagtttgctctctcgatcgagcttgtgaagctcttccttctctctcactatgtgactctaatgtgtggctgctaattaagcttgctagctagtagctgcatgctctagctagctatgagagagagagagagagagctttggatgccacacgctgcgtctccctctctacttataagaagagatcc
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| CDS seq | atggctgctcctcctctctcgtcgtggccatgggcaagcctcggctcgtacaagtatgtgttgtacggggcggtggtgtggaaggtggcggaggagtggaggcagcaaggggcggcgccggtggggtcgtggtggctccacctgctgctgctgttcgccgcccgcgggctcacctaccagttctggttctcctacggcaacatgctcttcttcacccgccgccgccgcgtcgtccccgactccgtcgacttccgccaggtcgacgccgaatgggactggtacgcccttcgccgggcaacgttggtggggagcccggcggtggcgcggcagcagctgctgctcccaagcctgaagcaagcgtgggacccacgcgggtgggccatcgcgctgctgctgcatgtgttggtcgctgagccgctcttttactgggcccaccgggccctgcaccgggccccactcttcagccgctaccacgccgctcaccaccacgcctcggtcaccacacccttgacagctggatttgggacgccactggagagcctcctgctgacggtggtgataggggtcccactcgcaggggcctttctgatgggggtagggtccgtgggcctggtctatggacacgtccttttgtttgacttcttgaggtccatgggctacagtaacgtggaggtgatatcccctagggtcttccaggctgttcctcttctcagatacctcatctacacccctacgtacctgagcctgcaccacagggagaaggactcaaacttctgcctgttcatgcctatttttgatctcctggggggcaccctcaaccacaagtcatgggagctgcaaaaggaggtctacttaggcaagaacgatcaggcgccggacttcgtgttcctggcacacgtggtggacatcatggcgtcgatgcacgtgccgttcgtgctccggtcgtgcagctcgacgccgttcgccaaccacttcgtcctcctcccgttttggccggtcgccttcggcttcatgctgctcatgtggtgctgctccaagaccttcctcgtcagctcctaccgcctccgcggcaacctccaccagatgtggactgtcccccgatatgggtttcagtacttcataccggcggcgaagaaaggcatcaacgagcagatcgagctggccatcctgcgtgcagatcggatgggcgtcaaggtgctcagcctcgccgctctcaataagaacgaggccctgaatggaggtggcacgctgttcgtgaacaagcacccggagctgagggtgagggtggtgcacggcaacaccctgacggcggccatgttgacattgtcgtcggagaggtttctgaagattcagagggaagcaccggcagagttccagcagtacctcgtgcaggtcacgaagtaccagcctgcacaaaactgcaagtacacgatggaacgcggggtggtgcacgcgtgccacgccggcggcgtggtgcacttcctggaagggtgggagcaccacgaggtgggcgccatcgacgtcgaccggatcgacgtcgtctggaaggcggcgctcaagcacggcctcacgccggcgtga
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| Protein seq | MAAPPLSSWPWASLGSYKYVLYGAVVWKVAEEWRQQGAAPVGSWWLHLLLLFAARGLTYQFWFSYGNMLFFTRRRRVVPDSVDFRQVDAEWDWYALRRATLVGSPAVARQQLLLPSLKQAWDPRGWAIALLLHVLVAEPLFYWAHRALHRAPLFSRYHAAHHHASVTTPLTAGFGTPLESLLLTVVIGVPLAGAFLMGVGSVGLVYGHVLLFDFLRSMGYSNVEVISPRVFQAVPLLRYLIYTPTYLSLHHREKDSNFCLFMPIFDLLGGTLNHKSWELQKEVYLGKNDQAPDFVFLAHVVDIMASMHVPFVLRSCSSTPFANHFVLLPFWPVAFGFMLLMWCCSKTFLVSSYRLRGNLHQMWTVPRYGFQYFIPAAKKGINEQIELAILRADRMGVKVLSLAALNKNEALNGGGTLFVNKHPELRVRVVHGNTLTAAMLTLSSERFLKIQREAPAEFQQYLVQVTKYQPAQNCKYTMERGVVHACHAGGVVHFLEGWEHHEVGAIDVDRIDVVWKAALKHGLTPA |
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| Function | Very-long-chain aldehyde decarbonylase GL1-2 [UniProtKB/Swiss-Prot:Q6ETL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_02g0005980 | OsPr106_02g0005980.01 | Chr02 | 4248132 | 4255375 | - | NAM | ||
| CDS seq | atggctgctcctcctctctcgtcgtggccatgggcaagcctcggctcgtacaagtatgtgttgtacggggcggtggtgtggaaggtggcggaggagtggaggcagcaaggggcggcgccggtggggtcgtggtggctccacctgctgctgctgttcgccgcccgcgggctcacctaccagttctggttctcctacggcaacatgctcttcttcacccgccgccgccgcgtcgtccccgactccgtcgacttccgccaggtcgacgccgaatgggactggtacgcccttcgccgggcaacgttggtggggagcccggcggtggcgcggcagcagctgctgctcccaagcctgaagcaagcgtgggacccacgcgggtgggccatcgcgctgctgctgcatgtgttggtcgctgagccgctcttttactgggcccaccgggccctgcaccgggccccactcttcagccgctaccacgccgctcaccaccacgcctcggtcaccacacccttgacagctggatttgggacgccactggagagcctcctgctgacggtggtgataggggtcccactcgcaggggcctttctgatgggggtagggtccgtgggcctggtctatggacacgtccttttgtttgacttcttgaggtccatgggctacagtaacgtggaggtgatatcccctagggtcttccaggctgttcctcttctcagatacctcatctacacccctacgtacctgagcctgcaccacagggagaaggactcaaacttctgcctgttcatgcctatttttgatctcctggggggcaccctcaaccacaagtcatgggagctgcaaaaggaggtctacttaggcaagaacgatcaggcgccggacttcgtgttcctggcacacgtggtggacatcatggcgtcgatgcacgtgccgttcgtgctccggtcgtgcagctcgacgccgttcgccaaccacttcgtcctcctcccgttttggccggtcgccttcggcttcatgctgctcatgtggtgctgctccaagaccttcctcgtcagctcctaccgcctccgcggcaacctccaccagatgtggactgtcccccgatatgggtttcagtacttcataccggcggcgaagaaaggcatcaacgagcagatcgagctggccatcctgcgtgcagatcggatgggcgtcaaggtgctcagcctcgccgctctcaataagaacgaggccctgaatggaggtggcacgctgttcgtgaacaagcacccggagctgagggtgagggtggtgcacggcaacaccctgacggcggccatgttgacattgtcgtcggagaggtttctgaagattcagagggaagcaccggcagagttccagcagtacctcgtgcaggtcacgaagtaccagcctgcacaaaactgcaagtacacgatggaacgcggggtggtgcacgcgtgccacgccggcggcgtggtgcacttcctggaagggtgggagcaccacgaggtgggcgccatcgacgtcgaccggatcgacgtcgtctggaaggcggcgctcaagcacggcctcacgccggcgtga
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| Protein seq | MAAPPLSSWPWASLGSYKYVLYGAVVWKVAEEWRQQGAAPVGSWWLHLLLLFAARGLTYQFWFSYGNMLFFTRRRRVVPDSVDFRQVDAEWDWYALRRATLVGSPAVARQQLLLPSLKQAWDPRGWAIALLLHVLVAEPLFYWAHRALHRAPLFSRYHAAHHHASVTTPLTAGFGTPLESLLLTVVIGVPLAGAFLMGVGSVGLVYGHVLLFDFLRSMGYSNVEVISPRVFQAVPLLRYLIYTPTYLSLHHREKDSNFCLFMPIFDLLGGTLNHKSWELQKEVYLGKNDQAPDFVFLAHVVDIMASMHVPFVLRSCSSTPFANHFVLLPFWPVAFGFMLLMWCCSKTFLVSSYRLRGNLHQMWTVPRYGFQYFIPAAKKGINEQIELAILRADRMGVKVLSLAALNKNEALNGGGTLFVNKHPELRVRVVHGNTLTAAMLTLSSERFLKIQREAPAEFQQYLVQVTKYQPAQNCKYTMERGVVHACHAGGVVHFLEGWEHHEVGAIDVDRIDVVWKAALKHGLTPA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_02g0005980 | OsPr106_02g0005980.02 | Chr02 | 4248105 | 4255374 | - | IsoSeq | ||
| CDS seq | atgggcaagcctcggctcgtacaagtatgtgttgtacggggcggtggtgtggaaggtggcggaggagtggaggcagcaaggggcggcgccggtggggtcgtggtggctccacctgctgctgctgttcgccgcccgcgggctcacctaccagttctggttctcctacggcaacatgctcttcttcacccgccgccgccgcgtcgtccccgactccgtcgacttccgccaggtcgacgccgaatgggactg
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| Protein seq | MGKPRLVQVCVVRGGGVEGGGGVEAARGGAGGVVVAPPAAAVRRPRAHLPVLVLLRQHALLHPPPPRRPRLRRLPPGRRRMGL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr02 | 4248424 | 4249264 | - | OsPr106_02g0005980.02 | OsPr106_02g0005980.01,OsPr106_02g0005980.02 | All |
| A5 | Chr02 | 4249374 | 4249650 | - | OsPr106_02g0005980.02 | OsPr106_02g0005980.01,OsPr106_02g0005980.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.392094 | 0.000000 | 4.257701 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0178800 | RBH | 0.000000 | 0.000000 | 3.772868 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g08230 | RBH | 0.000000 | 0.000000 | 1.021183 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0178800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006100 | RBH | 0.0 | 1.197144 | 5.899614 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006210 | RBH | 0.116593 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006020 | RBH | 1.285705 | 0.0 | 7.007947 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0005950 | RBH | 0.074222 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0024680 | RBH | 0.0 | 0.0 | 16.075882 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0074600 | RBH | 8.60159 | 0.11814 | 4.7732755 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0005960 | RBH | 0.0 | 0.0 | 0.722983 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0076500 | RBH | 8.701543 | 0.1277225 | 5.1946065 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006370 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0005940 | RBH | 0.000000 | 1.103149 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006240 | RBH | 0.746977 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006190 | RBH | 0.126423 | 0.107712 | 0.428032 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0005960 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006110 | RBH | 0.0 | 0.0 | 0.579438 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006070 | RBH | 0.433915 | 0.0 | 3.084808 |
