Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_01g0035110 | OGI:01099810 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr01:34474468-34476594 | ||||||||
| Gene Symbol | OsbHLH069 | ||||||||||
| DNA seq | gctttagcttcaacattgtgtgtttgtttcgtaatccattccggggacaatgtacacattgcttagcaggtgtaaattactaaactaatacctatatctacctaaacgtgcctccgaatgttgggtgccagaactccggcaccgtctcgctcgccaccgtataagtgcttgccaccggcacaaggcacaggcctcggctgcgcagatccggcttcggctgctctgcgtccttcgtgctctcagaaccctaattaattaggagcaaaaatgccatgaacatatgcaaccaataagtacataagattaacaagtactagctagggataaacagagtgaaaattaagtataccttctgctggaagtgctgcaatgggttcccattcttcaagtacggagagctcaaagactgcagtttgttcgattcagtgaatattagcgatgggaaatgtgttagttaaggagtgcagacaatgtcattttgaacactcaccgcaacttgttcgtgaaggaacttgatgtattcgatggcctcgtgaagaaccgatgcggtatcagtctaattaaagtacgaccatatcaaatgcgataagttagatcattgtcatcggagatgtgagagttctagtacaagagaactttgttctcctctccggtaattggaacggagaggaaattgattacagaaagaacctgtacctttccaaaaggcgagactagttgctggagcgcagtgattctgtcccctagcttctctttcctcacctgcatcgcaaaagcaagcaggaaaggagaaaatttttttagcaatccaaaagccatcatccatcgatgcttgcacagaaatatcaatagtcatcaaagcagcaacaaaaagagatgagagcttcgaaaggatcaaaaaggagaagttgatcgagaacatctgattgtatcatatcacgccgggcctcctcaccttgaacgtcggcaacggcgacggcgcctcgatccgtggcctcttcgctgccgccggcgagtcggagacgctcttcctgccctccgaggagcagatttgttgagccgacccggaatttgactgtacaagaagctgggcatataagtctatttcttgacgaaaccctaggtggcaatggctagctagctgcctgccactagctagctagttgatgtgctatgcatgtacgtctataatttaccttcgccaggagggtgttagcattagagctgcagctaggcttgggctgcatggcctgcaagagaagctgcgacggcagcggcggcgcaccgccgaaaggcagctggtagctgccggacaagaactgcatctgggcagccgccggcaacgagggcgccctcggcgtctgcgagaactgcatcaccgccgccgcggcgtcgtagcttgccgagtgctggtaatccccgaacgacgtcgtgatgctatgcgtcgccggcgccactgctggctccccggcgtcgaacgacaggccgtgcaacggcgccgacgcctgatcgaggagcaggccttggcccacgcccatgtccctgaacggattggtcatcacggcctcgtcggccgccgtcggctgggctcggaacggtctcgtggatgccgccatgtcgtcctggagcacggcctgaaagctagcgtcgcttctcccgctcctgacacaactcatgcaacggggaatgtcagacacacacacgcttgtatggatcgatcgatgtggatgatcagatgaagacggaagctaacttacaggaaggcctgcgtccagtccaccatgtggggatcgccaagagaggaagcggcatcggacagaggctgatgatgagcggcgctgctcctgctggggtcctggaacgttatggagctcgtcgactcggcggcggcagcggcggcgggggacgtccagccgcaggagaccctgtcagctgtgagcggcgacggcgccgcggagcacgccgacgtgccatggctcctctgagacgcactccaccactcgtcggccatggcggcgaagaagggcggaatcgagatggatcgatctcgccctgtatgtctctttgtttgcgatgttgttttgctttgaggtgcagcggcggcagtaggttggatggaacgagggg
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| CDS seq | atggccgacgagtggtggagtgcgtctcagaggagccatggcacgtcggcgtgctccgcggcgccgtcgccgctcacagctgacagggtctcctgcggctggacgtcccccgccgccgctgccgccgccgagtcgacgagctccataacgttccaggaccccagcaggagcagcgccgctcatcatcagcctctgtccgatgccgcttcctctcttggcgatccccacatggtggactggacgcaggccttcctgagcgggagaagcgacgctagctttcaggccgtgctccaggacgacatggcggcatccacgagaccgttccgagcccagccgacggcggccgacgaggccgtgatgaccaatccgttcagggacatgggcgtgggccaaggcctgctcctcgatcaggcgtcggcgccgttgcacggcctgtcgttcgacgccggggagccagcagtggcgccggcgacgcatagcatcacgacgtcgttcggggattaccagcactcggcaagctacgacgccgcggcggcggtgatgcagttctcgcagacgccgagggcgccctcgttgccggcggctgcccagatgcagttcttgtccggcagctaccagctgcctttcggcggtgcgccgccgctgccgtcgcagcttctcttgcaggccatgcagcccaagcctagctgcagctctaatgctaacaccctcctggcgaagactgataccgcatcggttcttcacgaggccatcgaatacatcaagttccttcacgaacaagttgcgtctttgagctctccgtacttgaagaatgggaacccattgcagcacttccagcagaagggttctgagagcacgaaggacgcagagcagccgaagccggatctgcgcagccgaggcctgtgccttgtgccggtggcaagcacttatacggtggcgagcgagacggtgccggagttctggcacccaacattcggaggcacgtttaggtag
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| Protein seq | MADEWWSASQRSHGTSACSAAPSPLTADRVSCGWTSPAAAAAAESTSSITFQDPSRSSAAHHQPLSDAASSLGDPHMVDWTQAFLSGRSDASFQAVLQDDMAASTRPFRAQPTAADEAVMTNPFRDMGVGQGLLLDQASAPLHGLSFDAGEPAVAPATHSITTSFGDYQHSASYDAAAAVMQFSQTPRAPSLPAAAQMQFLSGSYQLPFGGAPPLPSQLLLQAMQPKPSCSSNANTLLAKTDTASVLHEAIEYIKFLHEQVASLSSPYLKNGNPLQHFQQKGSESTKDAEQPKPDLRSRGLCLVPVASTYTVASETVPEFWHPTFGGTFR |
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| Function | Transcription factor bHLH123 [UniProtKB/Swiss-Prot:Q8GXT3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_01g0035110 | OsPr106_01g0035110.01 | Chr01 | 34474565 | 34476478 | - | NAM | ||
| CDS seq | atggccgacgagtggtggagtgcgtctcagaggagccatggcacgtcggcgtgctccgcggcgccgtcgccgctcacagctgacagggtctcctgcggctggacgtcccccgccgccgctgccgccgccgagtcgacgagctccataacgttccaggaccccagcaggagcagcgccgctcatcatcagcctctgtccgatgccgcttcctctcttggcgatccccacatggtggactggacgcaggccttcctgagcgggagaagcgacgctagctttcaggccgtgctccaggacgacatggcggcatccacgagaccgttccgagcccagccgacggcggccgacgaggccgtgatgaccaatccgttcagggacatgggcgtgggccaaggcctgctcctcgatcaggcgtcggcgccgttgcacggcctgtcgttcgacgccggggagccagcagtggcgccggcgacgcatagcatcacgacgtcgttcggggattaccagcactcggcaagctacgacgccgcggcggcggtgatgcagttctcgcagacgccgagggcgccctcgttgccggcggctgcccagatgcagttcttgtccggcagctaccagctgcctttcggcggtgcgccgccgctgccgtcgcagcttctcttgcaggccatgcagcccaagcctagctgcagctctaatgctaacaccctcctggcgaagactgataccgcatcggttcttcacgaggccatcgaatacatcaagttccttcacgaacaagttgcgtctttgagctctccgtacttgaagaatgggaacccattgcagcacttccagcagaagggttctgagagcacgaaggacgcagagcagccgaagccggatctgcgcagccgaggcctgtgccttgtgccggtggcaagcacttatacggtggcgagcgagacggtgccggagttctggcacccaacattcggaggcacgtttaggtag
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| Protein seq | MADEWWSASQRSHGTSACSAAPSPLTADRVSCGWTSPAAAAAAESTSSITFQDPSRSSAAHHQPLSDAASSLGDPHMVDWTQAFLSGRSDASFQAVLQDDMAASTRPFRAQPTAADEAVMTNPFRDMGVGQGLLLDQASAPLHGLSFDAGEPAVAPATHSITTSFGDYQHSASYDAAAAVMQFSQTPRAPSLPAAAQMQFLSGSYQLPFGGAPPLPSQLLLQAMQPKPSCSSNANTLLAKTDTASVLHEAIEYIKFLHEQVASLSSPYLKNGNPLQHFQQKGSESTKDAEQPKPDLRSRGLCLVPVASTYTVASETVPEFWHPTFGGTFR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_01g0035110 | OsPr106_01g0035110.02 | Chr01 | 34474468 | 34476594 | - | IsoSeq | ||
| CDS seq | cccctcgttccatccaacctactgccgccgctgcacctcaaagcaaaacaacatcgcaaacaaagagacatacagggcgagatcgatccatctcgattccgcccttcttcgccgccatggccgacgagtggtggagtgcgtctcagaggagccatggcacgtcggcgtgctccgcggcgccgtcgccgctcacagctgacagggtctcctgcggctggacgtcccccgccgccgctgccgccgccgagtcgacgagct
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| Protein seq | PLVPSNLLPPLHLKAKQHRKQRDIQGEIDPSRFRPSSPPWPTSGGVRLRGAMARRRAPRRRRRSQLTGSPAAGRPPPPLPPPSRRA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 2.894836 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0784900 | RBH | 0.509154 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g57580 | RBH | 0.464615 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0784900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0036090 | RBH | 0.0 | 0.000000 | 0.613224 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0035600 | RBH | 0.0 | 0.447056 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0035970 | RBH | 0.304077 | 0.0 | 0.463576 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0035370 | RBH | 0.000000 | 0.038910 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0022540 | RBH | 1.918690 | 3.324543 | 0.467987 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0549500 | RBH | 1.834356 | 7.8800555 | 0.4770395 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0034860 | RBH | 0.0 | 0.000000 | 0.083996 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0545200 | RBH | 2.0416795 | 8.2793805 | 0.7504895 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0034990 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0035040 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0035270 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0035350 | RBH | 0.0 | 1.034099 | 0.308658 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0035170 | RBH | 0.102069 | 1.339214 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G035660 | RBH | 0.0 | 2.082604 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0035310 | RBH | 0.617886 | 0.000000 | 1.183054 |
