Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_01g0026270 | OGI:01080540 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr01:27374485-27404452 | ||||||||
| Gene Symbol | GELP18, OsGELP18, OsGELP18a, OsGELP18b, GELP19, OsGELP19, GELP20, OsGELP20, OsGELP20a, OsGELP20b, OsGELP20c, GELP21, OsGELP21, OsGELP21a, OsGELP21b, OsGELP21c | ||||||||||
| DNA seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcggtactctgctcgcggcgattttccgccccctcctcccctgcatcgattggtcgaccgatcgaacgacccaactaacctgagatttgaaatttgggtgcaccgcgccgcagcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggtatgttgatataatccctcctctctctctacccacctttgacgatgacattttcaactagcgatatgaaatcgtagcagtagactagtagtttggtgggggttaatgtcttgatgatgatgcgcatctggtgataaatagaatggtctgaatgtgacacatggagattggagaagcaaatcccaaacatgccacaaactgattagtagagtataagcacgcagactgacaggtactaaggcactgtctcaaccttttgtggctctcagaagacatggaaggtgggagttggctagaaagttgaagagaaaaaaaaaaaggaaaagtatgctatagcattttccttatggtgtggaacttatcctagtaccttctatgccatttcagaattggtgcaatggtatacaatatatattccttgattcctttttagtttttacttgtgctttaggacgttgacatggtttctaaagaatataactgcatcgaagtattttccacgatacactactaatgtcattttcacatattatatgtcacctgtggttacttggtttagacacaaaaaaatgtgcatccaaagaaaataacagcacaaggaaaataagaaaagcaattcatcattaccagaaatagtggggtttgtttgtggcttgaagattgacagcttttgttgattgctgctaggcagatggtccatttcaaaatccataaccgtcattgtcaaacaccttaagtccataactgatactgtattttctataaaaaggaaatattgtaaaaggagtcctcaaactttctgcagtttatatatatatatatatatatatatatatataaaatcacaccgcgaatccataacacattgttttccaaagaatacatcatcattagttgaaattaaaaattataaaaaatattttataaatggacaccatgtcactgctacatatgaactttgcccttgaattgatggcatacaacataaatcagaaatcaattaatacgccaaggggaagatcatgctgctacaaatctggtttttagtagaaatgacaagtagtaagcttcctgtgatcctttaaatgtttaactatgatataataaataagcaattgtgatatgcttaaaattattttcagctataatatcatatttacatactgattctaaacactagttattgcacaggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgtgagtaacgtgcctatgttacatcttttctgtgtaccttgagaccctgtatcaagaagcaatacaaaattacatggcttgtaatgcaacagcgttgagtttgcaggaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggaaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggtgagttcagttaattcattactgtttctactatgatttcttttcgaaagcttaacactactaattttagtttttaggttacaagaaaaatactctatatgtgttctcttaaattcgattaccttagtgcttctcaaacgaagcaaatctgtctgtatccttcatatgtttgtaaggttcagaagtttattttcatcatgtcacgtaatgcacccccacgccagacctctgttcagatatctgcattcttatcatggtatatatatatattatgtgtattacaaattattgcattcttaccatggtatagatacattatgtgtattacaaattaacatgacatcacttgtactgagtttaagactgaactaactagtcggtttcactagaaaaactgtctagaagccttaatatggaggaaagcgcatattatcaagaaaaagaacatttttttcttctgagtatagcttgtttaacatttccctaacctcggttcaggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttgtaattctgtaactatattttttttattatatagacaatacgtgtgattaaaagatgtaacgattgtggtatttttgcctcattacagaactgcagaactgttctacacagaatggctgttgcccaagtgattggctggctcttgttattccttctctgtttttagtcacgaccacaaggttttatttgtggatcgtttgattcttcgtaaatttttaagatttattatttcttatagggtatgtgtagtattattataatttagctccattgtttttcttctgtgtatagtgaaagggttaggggttacagggagacaactacattctttggtcaccttggctgcgtggctgatgtggccgtgatgtcgcttctcgtagaggcatttcttatgagcgatattgtataaagatcatgcaatccgatcgctttatctaatttttagtgagttccatgactcttatttgtatccacaatcatcagaagtgccatatagcttaaataaaaaaactgtcagtgtcaaacatgtacgggatattgtttaaagaaatcgaaataacgaaaacacttcaaatattagataatataaaaagcacaactaccagtatatatcaatcaggtcaattatgttgcaacatcattaattcactacctactctccttgcacctaacactcttaagagaagcgattatttacttaatactccctccgtcacaaaaaaacgtaagctagtaaggaataaaataatctagtacaacgaatatatggataattgtactagattatcctatttcatacaaggttgagtatattttatagaggaagtaaaaaaaatattgtcattgtcgttggactacacttattttcccatttctatctcgagtcttatcacctgaaccattttgtgatttgttgctgcaagcctcattatcgttcgataagttgtttcaccatggcagaatgcgaacgacggggaaaaatattttcacttatgcttggttaaatatacatcgccgaaaaaaaaatcaatatatggatgtatcaaatcttttggtccaaagtaatgatatacaacaatctgtgtatctaaaagtgttaccttacgacttacgaaataaacgtacttgtaaacgcaactcaactggttagctttctcgtagtagaacgaagtccccttgattcaaatcctatacttgacatgagcatttgcatttacgggtaattattattttagcgatgagtgatatatagggatcaatgtgtacgtatcatgagcgcttagcatttatactacgttttcacagtgcatttagtggaggatggagcgtacctgtcaccgtctcatgtgtaataggctaacagcgaccagaggccctactgacctgtgggcattcgtcactcgagcccacttaacattaacgagccacgcttacgtttcttggagtatttgccttttttgggccaacgcgaaaaaacaccgcagagccaatcccagtggccgcttcgccttcgggcccgacgtcgagcagaagcaaacgaaagtgtaggaagaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttcggggactcgctggcggacacgggcaacgtcgctttcctctccggcaacgacctcgcagctgtggccaccctacggcgagaccttcttccaccgcgccaccggccggtgctccgacggccgcctcatcatcgacttcatcggtatgcctcatcatccatccatcctgcaggcctcgtctgcatcg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| CDS seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcgcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggaaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttaactgcagaactgttctacacagaatggctgttgcccaaaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttcggggactcgctggcggacacgggcaacctgtggccaccctacggcgagaccttcttccaccgcgccaccggccggtgctccgacggccgcctcatcatcgacttcatcggtatgcctcatcatccatccatcctgcaggcctcgtctgcatcgattgatcgctcgatccctgaagcaatggggctgccgttcctgcggccgtactggggagggcagaccgcgggggacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcggcccggacttcttccgggagagaggggtgcccacggacgacggtgtcgtgcacctcgagatggagatggggtggttccgcgatctgctcgacatgctctgcgccggcgacatggacggttgcaagggtatgatgaatcaatctctctttttggtcggagaaatcggaggcaatgattacaactatcctcttatgagcggcgtgcccattgaaaagattcgcagcttcactcctagtgttattgccaaaatttcttccacaatcaccgaattgatcggacttggagccaagacactagttgttcctggtaacctcccaattggatgtattccaacatacctcatgcaatttgagagtgataagaaggaagattatgagccagagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaactttttatagatgaattggaaaacttgcgcaagcttcaccccgatgtggccatcatctatactgattactatggagctgccatggaaatttttctttcccctgaacaatttggaattgaggatcctttggtcgcttgctgtggtggaggaggaccttatggtgtatctgcatctgcaggctgtggatatggtgaatacaaagtgtgtgatgacccatcaaagtatgcatcgtgggatggctttcatccatcagaagctgcatacaagggcattgcaattggcctgctacagggcccatacactcaacctccaatcgctagcatcaccgattcttgtctacagatcattggcctcggttcttctgctgaacgcaaggtcatctatgacatgatggtctcctctacttccggaggactctcgccgccggcggttgtgctggccgtggcggttgtgctgtcggcggcggcgtcacgggcgctggcggcgccgtgctacccgcgcgtgttctgcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggccctcgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgctcctccaacggccgcctcatcatcgacttcatcgctgaagcgatggggctgccgttcgtgcggccgtactggggcgggcagaccgcggggaacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcagcccggacttcttccgggagagaggggtgcccatggacgacgacaccgtgcacctcgacatggagatggagtggttccgtgatctgctcggcatgctctgcaccggcggcgacatggacggttgcaagggcatgatgaatcaatctcttttcttggttggagaaatcggaggcaatgattacaaccttcctcttatgagcggcatgtccattgaaaagattcgcaacttcactcctagtgtcattgccaaaatttcttccataatcaccgaattgattggacttggggccaagacactagttgttcccggtaacatcccaattggatgtattccaatgtacctcatgcaatttgagagtgataagaaggaagattatgagccaaagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaacttcttgtagatgaattggaaaacttgcgcaagcttcatcttgatgtgaccatcatctatgccgattactatggagctgccatggaagttttcctttcccctgaacgatttggaattgaggatcctttggtcgcttgctgtggtggaagaggaccttatggtgtatctgcatctgtacgctgtggatatggcgaatacaaagtgtgtgatgacccagcaaaatatgcatcgtgggatggcttccatccatcagaagctgcatacaagggcattgcaattggcctgctacagggttcatacactcaacctccaattgttagcatcactaattcttgtccgcagataattggccttggttcctctgttgaacacaaggccatgtacgacttaggtaaccggcagatggccaccgagagaaagaatggcttcctctacctccgggagaagaggagagctgcggcggtggtgctggcggccgtggctgtgctgctctcggcgtcacaggcactggcggcgccgtgctatccgcgcgtgttcagcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggcccacgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgcgcctccaacggccgcctcatcatcgacttcattgctgacgcgctggggctgccattcgtgcggccgtactggagcgggcggaccgcgggggacttcgcccacggggccaacttcgcggtgggcggcgccacggcgctcagcccggatttctaccgggagagaggcgtgcacgtgcgcgacaccgtgcacctcgacatggagatgaactggttccgcgatctgctcggcctgctctgcccagacgatcttgccgattgcaacgacatgatgaatcaatctctgttcttagtcggagaaattggtggcaacgattacaaccatcctcttatctgtggggaattgatcaggcttggagccaagacgttagttgttcctggtaatctcccaattggatgtattccatactatctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgggttctcgcaataccacaacaaacttcttatggatgaactggaaaatttacggaagcttcatcctgataatcctttggcagcttgctgtggtggaggaggaccttatggtgtatctgaaactgcaagatgtggacatggtgaatacaaggtgtgcgatgaccctcaactgtatgggtcatgggatgactatcatccatcagaagctgtgtttaaggccattgcaattggcctgctacggggttcatacacacaagctccactcgcgtgcccacaaattacagagctcggttcttctgttgaatacaaggtcctctatgatttgtag
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| Protein seq | MDSSSTSGRKGGGLLLSPPPAAVVVAVAVLLSAAEAATEEPCYPRLFSFGDSLTDTGNFAFIYGNDSREPALRPPYGETFFHRATGRFSDGRLVVDFIADALGLPFVRPYLSGRTAGDFACGANFAVGGATALSPAFFRARGVPMADIVHLDMEMKWFRDLLKLLCPGDLAGCTGMMNQSLFLVGEIGGNDYNLPLLSGVSITKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCVPNYLMIFKSGKKEDYEPETGCLRWMNEFSQYHNKLLIDELEKLRKLHPDVAIIYADYYGAAMEVFLSPEQFGIEDPLTACCGGGGPYGVSGTARCGYGEYKVCDDPQKFGSWDGFHPSEAAYKAIAIGLLRGSYTQPSFATTTNSCPQITELSSSVEYKVLYDLTAELFYTEWLLPKMVSSTSGGGAGLLSPPAVVLAVAVVLSAAAAAAQALAAPCYLRVFSFGDSLADTGNLWPPYGETFFHRATGRCSDGRLIIDFIGMPHHPSILQASSASIDRSIPEAMGLPFLRPYWGGQTAGDFASGANFAVGGATALGPDFFRERGVPTDDGVVHLEMEMGWFRDLLDMLCAGDMDGCKGMMNQSLFLVGEIGGNDYNYPLMSGVPIEKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCIPTYLMQFESDKKEDYEPEIGCLRWMNEFSQYHNKLFIDELENLRKLHPDVAIIYTDYYGAAMEIFLSPEQFGIEDPLVACCGGGGPYGVSASAGCGYGEYKVCDDPSKYASWDGFHPSEAAYKGIAIGLLQGPYTQPPIASITDSCLQIIGLGSSAERKVIYDMMVSSTSGGLSPPAVVLAVAVVLSAAASRALAAPCYPRVFCFGDSLTDTGNIAFLYGNDSRRPSLWPPYGETFFHRATGRSSNGRLIIDFIAEAMGLPFVRPYWGGQTAGNFASGANFAVGGATALSPDFFRERGVPMDDDTVHLDMEMEWFRDLLGMLCTGGDMDGCKGMMNQSLFLVGEIGGNDYNLPLMSGMSIEKIRNFTPSVIAKISSIITELIGLGAKTLVVPGNIPIGCIPMYLMQFESDKKEDYEPKIGCLRWMNEFSQYHNKLLVDELENLRKLHLDVTIIYADYYGAAMEVFLSPERFGIEDPLVACCGGRGPYGVSASVRCGYGEYKVCDDPAKYASWDGFHPSEAAYKGIAIGLLQGSYTQPPIVSITNSCPQIIGLGSSVEHKAMYDLGNRQMATERKNGFLYLREKRRAAAVVLAAVAVLLSASQALAAPCYPRVFSFGDSLTDTGNIAFLYGNDSRRPTLWPPYGETFFHRATGRASNGRLIIDFIADALGLPFVRPYWSGRTAGDFAHGANFAVGGATALSPDFYRERGVHVRDTVHLDMEMNWFRDLLGLLCPDDLADCNDMMNQSLFLVGEIGGNDYNHPLICGELIRLGAKTLVVPGNLPIGCIPYYLMIFKSGKKEDYEPETGCLRWMNGFSQYHNKLLMDELENLRKLHPDNPLAACCGGGGPYGVSETARCGHGEYKVCDDPQLYGSWDDYHPSEAVFKAIAIGLLRGSYTQAPLACPQITELGSSVEYKVLYDL |
||||||||||
| Function | GDSL esterase/lipase At1g28600 [UniProtKB/Swiss-Prot:Q94F40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_01g0026270 | OsPr106_01g0026270.01 | Chr01 | 27374485 | 27404452 | + | NAM | ||
| CDS seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcgcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggaaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttaactgcagaactgttctacacagaatggctgttgcccaaaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttcggggactcgctggcggacacgggcaacctgtggccaccctacggcgagaccttcttccaccgcgccaccggccggtgctccgacggccgcctcatcatcgacttcatcggtatgcctcatcatccatccatcctgcaggcctcgtctgcatcgattgatcgctcgatccctgaagcaatggggctgccgttcctgcggccgtactggggagggcagaccgcgggggacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcggcccggacttcttccgggagagaggggtgcccacggacgacggtgtcgtgcacctcgagatggagatggggtggttccgcgatctgctcgacatgctctgcgccggcgacatggacggttgcaagggtatgatgaatcaatctctctttttggtcggagaaatcggaggcaatgattacaactatcctcttatgagcggcgtgcccattgaaaagattcgcagcttcactcctagtgttattgccaaaatttcttccacaatcaccgaattgatcggacttggagccaagacactagttgttcctggtaacctcccaattggatgtattccaacatacctcatgcaatttgagagtgataagaaggaagattatgagccagagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaactttttatagatgaattggaaaacttgcgcaagcttcaccccgatgtggccatcatctatactgattactatggagctgccatggaaatttttctttcccctgaacaatttggaattgaggatcctttggtcgcttgctgtggtggaggaggaccttatggtgtatctgcatctgcaggctgtggatatggtgaatacaaagtgtgtgatgacccatcaaagtatgcatcgtgggatggctttcatccatcagaagctgcatacaagggcattgcaattggcctgctacagggcccatacactcaacctccaatcgctagcatcaccgattcttgtctacagatcattggcctcggttcttctgctgaacgcaaggtcatctatgacatgatggtctcctctacttccggaggactctcgccgccggcggttgtgctggccgtggcggttgtgctgtcggcggcggcgtcacgggcgctggcggcgccgtgctacccgcgcgtgttctgcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggccctcgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgctcctccaacggccgcctcatcatcgacttcatcgctgaagcgatggggctgccgttcgtgcggccgtactggggcgggcagaccgcggggaacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcagcccggacttcttccgggagagaggggtgcccatggacgacgacaccgtgcacctcgacatggagatggagtggttccgtgatctgctcggcatgctctgcaccggcggcgacatggacggttgcaagggcatgatgaatcaatctcttttcttggttggagaaatcggaggcaatgattacaaccttcctcttatgagcggcatgtccattgaaaagattcgcaacttcactcctagtgtcattgccaaaatttcttccataatcaccgaattgattggacttggggccaagacactagttgttcccggtaacatcccaattggatgtattccaatgtacctcatgcaatttgagagtgataagaaggaagattatgagccaaagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaacttcttgtagatgaattggaaaacttgcgcaagcttcatcttgatgtgaccatcatctatgccgattactatggagctgccatggaagttttcctttcccctgaacgatttggaattgaggatcctttggtcgcttgctgtggtggaagaggaccttatggtgtatctgcatctgtacgctgtggatatggcgaatacaaagtgtgtgatgacccagcaaaatatgcatcgtgggatggcttccatccatcagaagctgcatacaagggcattgcaattggcctgctacagggttcatacactcaacctccaattgttagcatcactaattcttgtccgcagataattggccttggttcctctgttgaacacaaggccatgtacgacttaggtaaccggcagatggccaccgagagaaagaatggcttcctctacctccgggagaagaggagagctgcggcggtggtgctggcggccgtggctgtgctgctctcggcgtcacaggcactggcggcgccgtgctatccgcgcgtgttcagcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggcccacgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgcgcctccaacggccgcctcatcatcgacttcattgctgacgcgctggggctgccattcgtgcggccgtactggagcgggcggaccgcgggggacttcgcccacggggccaacttcgcggtgggcggcgccacggcgctcagcccggatttctaccgggagagaggcgtgcacgtgcgcgacaccgtgcacctcgacatggagatgaactggttccgcgatctgctcggcctgctctgcccagacgatcttgccgattgcaacgacatgatgaatcaatctctgttcttagtcggagaaattggtggcaacgattacaaccatcctcttatctgtggggaattgatcaggcttggagccaagacgttagttgttcctggtaatctcccaattggatgtattccatactatctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgggttctcgcaataccacaacaaacttcttatggatgaactggaaaatttacggaagcttcatcctgataatcctttggcagcttgctgtggtggaggaggaccttatggtgtatctgaaactgcaagatgtggacatggtgaatacaaggtgtgcgatgaccctcaactgtatgggtcatgggatgactatcatccatcagaagctgtgtttaaggccattgcaattggcctgctacggggttcatacacacaagctccactcgcgtgcccacaaattacagagctcggttcttctgttgaatacaaggtcctctatgatttgtag
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| Protein seq | MDSSSTSGRKGGGLLLSPPPAAVVVAVAVLLSAAEAATEEPCYPRLFSFGDSLTDTGNFAFIYGNDSREPALRPPYGETFFHRATGRFSDGRLVVDFIADALGLPFVRPYLSGRTAGDFACGANFAVGGATALSPAFFRARGVPMADIVHLDMEMKWFRDLLKLLCPGDLAGCTGMMNQSLFLVGEIGGNDYNLPLLSGVSITKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCVPNYLMIFKSGKKEDYEPETGCLRWMNEFSQYHNKLLIDELEKLRKLHPDVAIIYADYYGAAMEVFLSPEQFGIEDPLTACCGGGGPYGVSGTARCGYGEYKVCDDPQKFGSWDGFHPSEAAYKAIAIGLLRGSYTQPSFATTTNSCPQITELSSSVEYKVLYDLTAELFYTEWLLPKMVSSTSGGGAGLLSPPAVVLAVAVVLSAAAAAAQALAAPCYLRVFSFGDSLADTGNLWPPYGETFFHRATGRCSDGRLIIDFIGMPHHPSILQASSASIDRSIPEAMGLPFLRPYWGGQTAGDFASGANFAVGGATALGPDFFRERGVPTDDGVVHLEMEMGWFRDLLDMLCAGDMDGCKGMMNQSLFLVGEIGGNDYNYPLMSGVPIEKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCIPTYLMQFESDKKEDYEPEIGCLRWMNEFSQYHNKLFIDELENLRKLHPDVAIIYTDYYGAAMEIFLSPEQFGIEDPLVACCGGGGPYGVSASAGCGYGEYKVCDDPSKYASWDGFHPSEAAYKGIAIGLLQGPYTQPPIASITDSCLQIIGLGSSAERKVIYDMMVSSTSGGLSPPAVVLAVAVVLSAAASRALAAPCYPRVFCFGDSLTDTGNIAFLYGNDSRRPSLWPPYGETFFHRATGRSSNGRLIIDFIAEAMGLPFVRPYWGGQTAGNFASGANFAVGGATALSPDFFRERGVPMDDDTVHLDMEMEWFRDLLGMLCTGGDMDGCKGMMNQSLFLVGEIGGNDYNLPLMSGMSIEKIRNFTPSVIAKISSIITELIGLGAKTLVVPGNIPIGCIPMYLMQFESDKKEDYEPKIGCLRWMNEFSQYHNKLLVDELENLRKLHLDVTIIYADYYGAAMEVFLSPERFGIEDPLVACCGGRGPYGVSASVRCGYGEYKVCDDPAKYASWDGFHPSEAAYKGIAIGLLQGSYTQPPIVSITNSCPQIIGLGSSVEHKAMYDLGNRQMATERKNGFLYLREKRRAAAVVLAAVAVLLSASQALAAPCYPRVFSFGDSLTDTGNIAFLYGNDSRRPTLWPPYGETFFHRATGRASNGRLIIDFIADALGLPFVRPYWSGRTAGDFAHGANFAVGGATALSPDFYRERGVHVRDTVHLDMEMNWFRDLLGLLCPDDLADCNDMMNQSLFLVGEIGGNDYNHPLICGELIRLGAKTLVVPGNLPIGCIPYYLMIFKSGKKEDYEPETGCLRWMNGFSQYHNKLLMDELENLRKLHPDNPLAACCGGGGPYGVSETARCGHGEYKVCDDPQLYGSWDDYHPSEAVFKAIAIGLLRGSYTQAPLACPQITELGSSVEYKVLYDL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_01g0026270 | OsPr106_01g0026270.02 | Chr01 | 27389105 | 27391570 | + | IsoSeq | ||
| CDS seq | agagccaatcccagtggcggcttcgccttcgtgcccgacgaccacctcgagcagaaggaaacgaaa |
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| Protein seq | RANPSGGFAFVPDDHLEQKETK |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr01 | 27390475 | 27391184 | + | OsPr106_01g0026270.01 | OsPr106_01g0026270.01,OsPr106_01g0026270.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.801051 | 4.938442 | 6.611800 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0650000 | RBH | 0.068445 | 0.097880 | 0.468628 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g46169 | RBH | 1.302544 | 1.834812 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0649900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0027350 | RBH | 0.0 | 4.367940 | 6.923158 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0026830 | RBH | 0.203569 | 1.455687 | 0.704922 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0027300 | RBH | 0.436857 | 0.0 | 7.933193 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0026540 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0026290 | RBH | 3.381404 | 0.000000 | 7.553514 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0440200 | RBH | 0 | 0.1429665 | 0.0246645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0025970 | RBH | 0.086698 | 0.197365 | 0.445620 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0429000 | RBH | 3.9787785 | 8.287843 | 0.725078 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0026220 | RBH | 0.108131 | 0.145926 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0026140 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0026460 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0026520 | RBH | 0.451044 | 0.267637 | 0.974783 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0026350 | RBH | 1.150223 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G026720 | RBH | 0.280848 | 0.000000 | 0.649896 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0026500 | RBH | 1.870623 | 9.602602 | 11.271278 |
