Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_01g0008000 | OGI:01020220 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr01:6356615-6384381 | ||||||||
| Gene Symbol | GELP2, OsGELP2, OsGELP2a, OsGELP2b, GELP4, OsGELP4, GELP7, OsGELP7, GELP8, OsGELP8, GELP9, OsGELP9, GELP10, OsGELP10, GELP11, OsGELP11, - | ||||||||||
| DNA seq | caacactggatcgcactgccgccgccgccgacgcctcaacttatcgacagcgatcgatagccacggccggcgacgcacggcacgactctctcaatcggtcgcggccacgcgcggtcggcgaggccaccgtgtacgccggtaagaacacgccgcccagaggttagtcgctggacatcgtttttcaagatcagattaattatgattaatcacacctttgcacgtactaccaattagtcccccaactacttgccaattgatccagtcactactcactactagtgcttagattctatttataatgatgattcatcttataagtattagtattaatgatgttaaatacagatctaaaattgctgctagggaatatttatcgaaggaagataagaagtttataacattatatcattacttcactagttctctgactaagaaaatatctagttttcagagtgtgcgccatgatcgattggtattaatttttgttgtagttttttgggattttagttgttattagttgctactacaatgttttgtgcaaatgcgtaaaattatgcttaaagtactttagtaataaaataacttacaacaaaataaataataattatgtttttaattagataaattttcaaacatgtgttaaaaactcaacgacgtcatctattaaaaaaagaggcagtactacctatgttattttttattttgatgcttcaatatcaacgcaatcttcaaagtacatattttatcactaattttctaacttatatactccctctgcccaaaaagtccaaaaatataacaagtattagttatgaatctagacaaacacatgattcatagctaaacttatattttaagatgagggtagtatttatcaaatttaataaaagtataacttgaaactatgaagtataaacatgtactactaattgctctgtcattatcaaacaaatacatgttaataacatgaaggatctcactggtggcgccaatcctgaattcctgcaggcctaagctagcagttggacaaaagcccaaattaaccatggagcactcaccttcaaacaggatgaccttccttctccttctcctcctccaactcctcattggatgcacacactatgctcaggccaaccctggccatcacatgatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagcttgccgcgccgctgcttcccgtcatcccattggacaacctcccctacggcgagaccttcttcggccaccccgctggccgtgcctccaatggccgactcatcatcgacttcattggtacagtacatacttgttttccaattaatgccggatggcatggtggctacctgatcgactgtctgacgaactaattatcgatcgtttcaagcagccgggcactttggagtccctttcctccccccatatcttggccaggtgcagaacttcagccatggcgccaacttcgccgtcgtcggcgccacggcgctcgacctcgccttcttccagaagaacaacatcacaaacgttcccccgttcaacagctcactgagcgtgcagctcgagtggttccacaagctcagacctaccttgtgctcgaaaatccaaggtacgtgtaaattgtaatgttataggtaatcttggttaattgatcgatttggtattttttggtcgttgaattcagcagctagtaagctagctaggacgattcatcgatctctcatgttcctttgatctcttcagggtgcaaacattacttcgagagatcgctcttcttcatgggagagttcggcgggaacgactacgtcttcctcttggccgccggcaaaaccgtcgacgaagtcatgtcatgctacgtaccaaaggtcatcggagccatctctgccggcgtcgaggttagcacaggatttccttcacgtctctctcagatgcagtcttgctgttgcagccacgtcgactgtcacgccccgaactagtaccgaccggaactagcccgtgacgctccaaattaacctgttaatcgataccagtcctagaaaatagtgctggtatcataggaagacagaatatcacagcaacagaggtctctttattatagagtagaggtacagtcatgttgggctgcggacagatcccgagctcacaactgcattacaaaagggaaacggaagccaggacttggaccaatcaacacaggcgcgacttgggaactaggccgaaaccctaaaactcatcgtagccggcttgctcctggaagaactcctcatcagcaggatccgcttcatcttcttcagcaactgagggggggatatttatatagagcaagcgtgagtacgggagtactcagcaagccatgggaaataagtgtttaatgcaggcttcaaagaaaggctgttgtttttgcaattgatttaatttgaactcttttctaaaaacaactaggtgagtgcttctcaaacgacacggatgagacagtgcgtctcgtccggtcggagtatgtgcaatgtatcagtctttagaattgaaacaaggttggcacccggccaacagcttttcaaacggtcacccgggccaaccacttttcaaacggccacccgggcctagctgatcccatcagttgcagatttttcaaacatcgaaccccttttcacaacagtaatttcacaagcagtagtcaaacaaaactacgctaggaatcacctcacatccgcccatgaccgtgggcacggctgttcgaacagtttgttaacctctgtagagggggtacactttacccacacgacattactaacccggatcacccagcccgtggggatcagccacgtcgggagacctccaagctttcatgacaaggcatttccaaagccgacacaggtttaccatatgccgacgagaggggtcccagaccaacaacaggttaggtcccaaaccatactgtgccaggaagcccaggggtcctccccgacaccaccccggtgaatccacatgtctctcggcattaaggctcccctgataagctagttactcagtcaggggtgtcccattccacccatgtggtcgtacttgtcttatgtttggatgaaattccaaggaaattggtccttaagtgcgagatcgggaaaccgtacacccggtacgttccccggtccgcggttttgaaaattcatttagttcgcaagcactgacccaggtgtcgggttttccaaatcttttgtaaaacccaagttttacccaagttgttattcagattttaagtttgaaggcgtccgtcgatactcgcacagggtgcacgaatatcgagacgcaactagatggttacaaggggacatggtataacaattaacaaaggaaggatcaaatgcaacaaattaggtaggtccgccaatctgccttgcaaacgggacaaacagattaagtgcgatcctatcaatgcataatatttttcaagcaacataattaaatttcaaatataggctcaagatgttcaaaggtggcttgccttgctcgagatctggagcttgatcctcgaaatcctcgcactgcgggtcttcgggctccgaaactacacgcgaaacgggacaactcaataaacggcaaaaataaagccctattaatgacctctaagcgtgccattagatagatctcgagatttgaggaattttggaagttgaacggagtcaaacggatttacggttgggaagatattgaatttctaagattattggatttttggtctaaaggaaaaggatttaattaaatcctttttggaaaagaaaaagaaaagaaaaggaaagagggagggattatagactttttctcgggcggctagggcgcggcccaagggaaaaggagcggaccagccgagctaaatgggccggccggcccaaggcggcccaagtgcgcgcgcgcgggaggggaggagagagagggccggtggaccgggctcaccgtgcgcgctcccgggtgggacccacttgtcagcggctcggctcaccgtgcggagggagcacgcggcgcacgcgcgcgggcgggggagggacgcggtgcacgcgcgcagtctgcggaggaacgggtgcggcgggcccacgcgcagcctcacggctcacggtggaacgcgcgcacgggaggggctgaccggggtcggcccgtcccgacctcggctgagctggcgccgacgtggcgcctacgtggctgccatgtgggctggcgggaggtagacgacgacgccggccggaacggacggcggacaacagcggtgagcggcggagcgaaccacggcgataccggcgaaagcgagcacaccgggtggttgcacgagacgaggggagacgagccaacggctcggattcgccggaggaagcttgacggcggcgaatcgcggcggcgacaaccggcggggagggaagagggaaacggcgacgaggccatgaggggccgattcccggcggtgagagcatccacgcggccacgggaatccgatgctagcgtcggattgggcggagctacgccgatcgaggctggcgacgtgcgggtgctacggagctcgagcggcgacggcggcgagcacacggcgagcgacggcaatggttggggcggcgccagctagctacggggagtctactcgtgctaccaccgaagactaaggaggggagatggagcgaggaggaagaacggagaggggcactactgtgcgggtcggggcgctatgacgagaggccgacggcgcgggagtaatctctccggcctcgggccggggaagaggaaggagagggcgcggccgaagttcccttccgcgtcctagtgcgcaccggctcctccggcacacacgcgacggctgcggtcggcgagagggacggcaatggcgcgggcgagaaacagggaagattgggaggggaaaaggggaagggagggcgcctgggtttatagggggcggcaatgtcggtttggaaaccgactttggcggtcaaggcgcgagct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| CDS seq | atggagcactcaccttcaaacaggatgaccttccttctccttctcctcctccaactcctcattggatgcacacactatgctcaggccaaccctggccatcacatgatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagcttgccgcgccgctgcttcccgtcatcccattggacaacctcccctacggcgagaccttcttcggccaccccgctggccgtgcctccaatggccgactcatcatcgacttcattgccgggcactttggagtccctttcctccccccatatcttggccaggtgcagaacttcagccatggcgccaacttcgccgtcgtcggcgccacggcgctcgacctcgccttcttccagaagaacaacatcacaaacgttcccccgttcaacagctcactgagcgtgcagctcgagtggttccacaagctcagacctaccttgtgctcgaaaatccaagggtgcaaacattacttcgagagatcgctcttcttcatgggagagttcggcgggaacgactacgtcttcctcttggccgccggcaaaaccgtcgacgaagtcatgtcatgctacgtaccaaaggtcatcggagccatctctgccggcgtcgaggcggtgatcgaggagggagccaggtacgtggtggtgccgggccagcagccgacgggttgcctcccggtcgtcctcacgccatacgcgagcccgaacgcgacggactacgacgccggcaccggctgcctgtggcggttcaacgagctcgcacgctaccacaacgcggcgctgttggcggcggtgtcgctgctccggcgcaagtacccgtcggccaccatcgtctttgccgactactacgacccggtgatcgagttcatgcagaagccagacgatttcgcattcagtgactcgtccaagctccgggcgtgctgcggcggcggcggcggaccatacaactacaacgcgacggtggcgtgcggcctcccaggcacaagcgtgtgcccgacccccaacacgtccatcaactgggacgggatccacctcacggaggcggcctacgcccgcatcgccgcctgctggctgcacggcccgcacgcgcatccgcccatcctggcggccgtgcgccgccgcacctgcaattgccccatggagcactcaccttcaaacaaaatgaccctccttctcctcctcctcctcctccttggatgcacgcaccacggtcaggcgaacatgtactccggccatcccaagatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagctggcggcgccggtgattcccgtcatcgctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgcctccgacggccgcctcaacgtcgacttcatcgctgaggactttggagtccccttgctccccccgtaccttggcgagtccaagaacttcagccatggcgccaacttcgctgtcgtcggcgccacagcgctcgacctcgccttcttccagaagaacaacatcaccagcgtgcccccgttcaacacctcattgagcgtgcaggtcgagtggttccacaagctcaagcctaccttgttgcagagattacttcgagagatcgctcttcttcatgggcgcaagtacccgtcggccaccatcgtctttgccgactactacgacccggtgatcgagttcatgcagaagccagacgatttcgcattcagtgactcgtccaagctccgggcgtgctgcggcggcggcggcggaccatacaactacaacgcgacggtggcgtgcggcctcccaggcacaagcgtgtgcccgacccccaacacgtccatcaactgggacgggatccacctcacggaggcggcctacgcccgcatcgccgcctgctggctgcacggcccgcacgcgcatccgcccatcctggcggcccactcaccttcaaacaaaatgaccctccttctcctcctcctcctcctccttggatgcacgcaccacggtcaggcgaacatgtactccggccatcccaagatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagctggcggcgccggtgattcccgtcatcgctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgcctccgacggccgcctcaacgtcgacttcatcgctgaggactttggagtccccttgctccccccgtaccttggcgagtccaagaacttcagccatggcgccaacttcgccgtcgtcggcgccacagcgctcgacctcgccttcttccagaagaacaacatcaccagcgtgcccccgttcaacacctcattgagcgtgcaggtcgagtggttccacaagctcaagcctaccttgtgctcgacgacccaaggttgcagagattacttcgagagatcgctcttcttcatgggcgagttcggcggcaacgactacgtcttcctcttggccgccggcaagaccgtcgacgaggccatgtcgtacgtgccaaaggtcgtcggagttatctctgccggcgtcgaggcggtgatcgaggagggagccaggtacgtggtggtgccgggtcagctgccgacggggtgcctcccgatcatcctcacgctgtacgcgagcgcgaacgcgacggactacgagtccggcgccggctgcctgaggcggttcaacgagctcgcacgctaccacaacgcggcgctgttcgcggcggtgtcgctgctccggggcaagcacccgtcggccgccatcgtcttcgccgactactaccagccggtgatcgagttcgtgcgaatgccagaaaatttcgggttcagtcgctcgtcgaggctccgggcgtgctgcggcggcggggggcggtacaactacaacgcgacggcggcgtgcggcctcgccggcgcgacggcgtgcccggaccccgccgcgtcgatcaactgggacggcgtccacctgacggaggcggcctacggccgcatcgccgccggctggctgcgcggcccgtacgcgcagccgcccatcctcgcggcccactcaaaaccagtagctttcgtcctcctcctcctcttagcctgcctgcattacgctcaggcgaaccccagccgccgtcccttggtccagtccatcttcagcttcggcaactcgtacgccgacaccggcaacttcgtcaggctggccgcgccgctgcttccggtcatccctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgcctccaatggccgcatcatcatggatttcatcgccgagaagtttcaggtcccattcgtcccaccatctcttggccaaggtgaggacttcacccatggcgccaacttcgccgtcgtcggcgccagcgccctcgatctagccttcttcctccacaacaacatcaccagcgtcccaccattcaaaacctccctcagcgtgcagctggagtggttccacaagctcaaacctacactgtgctcaacagcccaagaatgcagagactacttcaggagatcactcttcttcatgggagagttcggcgggaacgactacgtcttcctccaggccgccgggaaaaccgtcgagcagcttatcccctacgtgccaaaggtcgtcggagccatctccgccggcatcgaggtctcgtacattttcaccgacatttgcagagacacaaactatacatataatcctcaattcacaaacggaattgacgttaattactgtgtgatcgatgcatttattcaggcggtgataaaggaaggggcggtgcaggtggtggtgccgggggagctgcccaacggctgcgtgcccatcatcctgacgctgtacgcgagcaagagcagaggcgactacgacgcgcgcggctgcctgaagaagcagaacgcgctcgcgcgctaccacaactcggcgctgttcgaggcggtgtcgcggctgaggcacaggtacccttgggtgaagatcgtctacgccgactactacaagccggtgatcgacttcatcaagaaaccgtccagattcgggttcagtgcctcgtcgaggctccgggcgtgctgcggcggcggcggcggcgggccgtacaactacaacgcgacggcggcgtgcggcttccccggcgcgagcgcgtgcccggaccccgccgcgtccatcagctgggacggcatccacctcacggaggcggcctacgcccgcatcgccgccggctggctgcgcggcccgtacgcgcatccgcctatcctcgcggccgtgcgccagtag
More
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| Protein seq | MEHSPSNRMTFLLLLLLQLLIGCTHYAQANPGHHMIDSIFSFGNSYSDTGNFVKLAAPLLPVIPLDNLPYGETFFGHPAGRASNGRLIIDFIAGHFGVPFLPPYLGQVQNFSHGANFAVVGATALDLAFFQKNNITNVPPFNSSLSVQLEWFHKLRPTLCSKIQGCKHYFERSLFFMGEFGGNDYVFLLAAGKTVDEVMSCYVPKVIGAISAGVEAVIEEGARYVVVPGQQPTGCLPVVLTPYASPNATDYDAGTGCLWRFNELARYHNAALLAAVSLLRRKYPSATIVFADYYDPVIEFMQKPDDFAFSDSSKLRACCGGGGGPYNYNATVACGLPGTSVCPTPNTSINWDGIHLTEAAYARIAACWLHGPHAHPPILAAVRRRTCNCPMEHSPSNKMTLLLLLLLLLGCTHHGQANMYSGHPKIDSIFSFGNSYSDTGNFVKLAAPVIPVIAFNNLPYGETFFGHPTGRASDGRLNVDFIAEDFGVPLLPPYLGESKNFSHGANFAVVGATALDLAFFQKNNITSVPPFNTSLSVQVEWFHKLKPTLLQRLLREIALLHGRKYPSATIVFADYYDPVIEFMQKPDDFAFSDSSKLRACCGGGGGPYNYNATVACGLPGTSVCPTPNTSINWDGIHLTEAAYARIAACWLHGPHAHPPILAAHSPSNKMTLLLLLLLLLGCTHHGQANMYSGHPKIDSIFSFGNSYSDTGNFVKLAAPVIPVIAFNNLPYGETFFGHPTGRASDGRLNVDFIAEDFGVPLLPPYLGESKNFSHGANFAVVGATALDLAFFQKNNITSVPPFNTSLSVQVEWFHKLKPTLCSTTQGCRDYFERSLFFMGEFGGNDYVFLLAAGKTVDEAMSYVPKVVGVISAGVEAVIEEGARYVVVPGQLPTGCLPIILTLYASANATDYESGAGCLRRFNELARYHNAALFAAVSLLRGKHPSAAIVFADYYQPVIEFVRMPENFGFSRSSRLRACCGGGGRYNYNATAACGLAGATACPDPAASINWDGVHLTEAAYGRIAAGWLRGPYAQPPILAAHSKPVAFVLLLLLACLHYAQANPSRRPLVQSIFSFGNSYADTGNFVRLAAPLLPVIPFNNLPYGETFFGHPTGRASNGRIIMDFIAEKFQVPFVPPSLGQGEDFTHGANFAVVGASALDLAFFLHNNITSVPPFKTSLSVQLEWFHKLKPTLCSTAQECRDYFRRSLFFMGEFGGNDYVFLQAAGKTVEQLIPYVPKVVGAISAGIEVSYIFTDICRDTNYTYNPQFTNGIDVNYCVIDAFIQAVIKEGAVQVVVPGELPNGCVPIILTLYASKSRGDYDARGCLKKQNALARYHNSALFEAVSRLRHRYPWVKIVYADYYKPVIDFIKKPSRFGFSASSRLRACCGGGGGGPYNYNATAACGFPGASACPDPAASISWDGIHLTEAAYARIAAGWLRGPYAHPPILAAVRQ |
||||||||||
| Function | GDSL esterase/lipase At5g45910 [UniProtKB/Swiss-Prot:Q9FJ45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_01g0008000 | OsPr106_01g0008000.01 | Chr01 | 6357660 | 6384381 | + | NAM | ||
| CDS seq | atggagcactcaccttcaaacaggatgaccttccttctccttctcctcctccaactcctcattggatgcacacactatgctcaggccaaccctggccatcacatgatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagcttgccgcgccgctgcttcccgtcatcccattggacaacctcccctacggcgagaccttcttcggccaccccgctggccgtgcctccaatggccgactcatcatcgacttcattgccgggcactttggagtccctttcctccccccatatcttggccaggtgcagaacttcagccatggcgccaacttcgccgtcgtcggcgccacggcgctcgacctcgccttcttccagaagaacaacatcacaaacgttcccccgttcaacagctcactgagcgtgcagctcgagtggttccacaagctcagacctaccttgtgctcgaaaatccaagggtgcaaacattacttcgagagatcgctcttcttcatgggagagttcggcgggaacgactacgtcttcctcttggccgccggcaaaaccgtcgacgaagtcatgtcatgctacgtaccaaaggtcatcggagccatctctgccggcgtcgaggcggtgatcgaggagggagccaggtacgtggtggtgccgggccagcagccgacgggttgcctcccggtcgtcctcacgccatacgcgagcccgaacgcgacggactacgacgccggcaccggctgcctgtggcggttcaacgagctcgcacgctaccacaacgcggcgctgttggcggcggtgtcgctgctccggcgcaagtacccgtcggccaccatcgtctttgccgactactacgacccggtgatcgagttcatgcagaagccagacgatttcgcattcagtgactcgtccaagctccgggcgtgctgcggcggcggcggcggaccatacaactacaacgcgacggtggcgtgcggcctcccaggcacaagcgtgtgcccgacccccaacacgtccatcaactgggacgggatccacctcacggaggcggcctacgcccgcatcgccgcctgctggctgcacggcccgcacgcgcatccgcccatcctggcggccgtgcgccgccgcacctgcaattgccccatggagcactcaccttcaaacaaaatgaccctccttctcctcctcctcctcctccttggatgcacgcaccacggtcaggcgaacatgtactccggccatcccaagatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagctggcggcgccggtgattcccgtcatcgctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgcctccgacggccgcctcaacgtcgacttcatcgctgaggactttggagtccccttgctccccccgtaccttggcgagtccaagaacttcagccatggcgccaacttcgctgtcgtcggcgccacagcgctcgacctcgccttcttccagaagaacaacatcaccagcgtgcccccgttcaacacctcattgagcgtgcaggtcgagtggttccacaagctcaagcctaccttgttgcagagattacttcgagagatcgctcttcttcatgggcgcaagtacccgtcggccaccatcgtctttgccgactactacgacccggtgatcgagttcatgcagaagccagacgatttcgcattcagtgactcgtccaagctccgggcgtgctgcggcggcggcggcggaccatacaactacaacgcgacggtggcgtgcggcctcccaggcacaagcgtgtgcccgacccccaacacgtccatcaactgggacgggatccacctcacggaggcggcctacgcccgcatcgccgcctgctggctgcacggcccgcacgcgcatccgcccatcctggcggcccactcaccttcaaacaaaatgaccctccttctcctcctcctcctcctccttggatgcacgcaccacggtcaggcgaacatgtactccggccatcccaagatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagctggcggcgccggtgattcccgtcatcgctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgcctccgacggccgcctcaacgtcgacttcatcgctgaggactttggagtccccttgctccccccgtaccttggcgagtccaagaacttcagccatggcgccaacttcgccgtcgtcggcgccacagcgctcgacctcgccttcttccagaagaacaacatcaccagcgtgcccccgttcaacacctcattgagcgtgcaggtcgagtggttccacaagctcaagcctaccttgtgctcgacgacccaaggttgcagagattacttcgagagatcgctcttcttcatgggcgagttcggcggcaacgactacgtcttcctcttggccgccggcaagaccgtcgacgaggccatgtcgtacgtgccaaaggtcgtcggagttatctctgccggcgtcgaggcggtgatcgaggagggagccaggtacgtggtggtgccgggtcagctgccgacggggtgcctcccgatcatcctcacgctgtacgcgagcgcgaacgcgacggactacgagtccggcgccggctgcctgaggcggttcaacgagctcgcacgctaccacaacgcggcgctgttcgcggcggtgtcgctgctccggggcaagcacccgtcggccgccatcgtcttcgccgactactaccagccggtgatcgagttcgtgcgaatgccagaaaatttcgggttcagtcgctcgtcgaggctccgggcgtgctgcggcggcggggggcggtacaactacaacgcgacggcggcgtgcggcctcgccggcgcgacggcgtgcccggaccccgccgcgtcgatcaactgggacggcgtccacctgacggaggcggcctacggccgcatcgccgccggctggctgcgcggcccgtacgcgcagccgcccatcctcgcggcccactcaaaaccagtagctttcgtcctcctcctcctcttagcctgcctgcattacgctcaggcgaaccccagccgccgtcccttggtccagtccatcttcagcttcggcaactcgtacgccgacaccggcaacttcgtcaggctggccgcgccgctgcttccggtcatccctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgcctccaatggccgcatcatcatggatttcatcgccgagaagtttcaggtcccattcgtcccaccatctcttggccaaggtgaggacttcacccatggcgccaacttcgccgtcgtcggcgccagcgccctcgatctagccttcttcctccacaacaacatcaccagcgtcccaccattcaaaacctccctcagcgtgcagctggagtggttccacaagctcaaacctacactgtgctcaacagcccaagaatgcagagactacttcaggagatcactcttcttcatgggagagttcggcgggaacgactacgtcttcctccaggccgccgggaaaaccgtcgagcagcttatcccctacgtgccaaaggtcgtcggagccatctccgccggcatcgaggtctcgtacattttcaccgacatttgcagagacacaaactatacatataatcctcaattcacaaacggaattgacgttaattactgtgtgatcgatgcatttattcaggcggtgataaaggaaggggcggtgcaggtggtggtgccgggggagctgcccaacggctgcgtgcccatcatcctgacgctgtacgcgagcaagagcagaggcgactacgacgcgcgcggctgcctgaagaagcagaacgcgctcgcgcgctaccacaactcggcgctgttcgaggcggtgtcgcggctgaggcacaggtacccttgggtgaagatcgtctacgccgactactacaagccggtgatcgacttcatcaagaaaccgtccagattcgggttcagtgcctcgtcgaggctccgggcgtgctgcggcggcggcggcggcgggccgtacaactacaacgcgacggcggcgtgcggcttccccggcgcgagcgcgtgcccggaccccgccgcgtccatcagctgggacggcatccacctcacggaggcggcctacgcccgcatcgccgccggctggctgcgcggcccgtacgcgcatccgcctatcctcgcggccgtgcgccagtag
More
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| Protein seq | MEHSPSNRMTFLLLLLLQLLIGCTHYAQANPGHHMIDSIFSFGNSYSDTGNFVKLAAPLLPVIPLDNLPYGETFFGHPAGRASNGRLIIDFIAGHFGVPFLPPYLGQVQNFSHGANFAVVGATALDLAFFQKNNITNVPPFNSSLSVQLEWFHKLRPTLCSKIQGCKHYFERSLFFMGEFGGNDYVFLLAAGKTVDEVMSCYVPKVIGAISAGVEAVIEEGARYVVVPGQQPTGCLPVVLTPYASPNATDYDAGTGCLWRFNELARYHNAALLAAVSLLRRKYPSATIVFADYYDPVIEFMQKPDDFAFSDSSKLRACCGGGGGPYNYNATVACGLPGTSVCPTPNTSINWDGIHLTEAAYARIAACWLHGPHAHPPILAAVRRRTCNCPMEHSPSNKMTLLLLLLLLLGCTHHGQANMYSGHPKIDSIFSFGNSYSDTGNFVKLAAPVIPVIAFNNLPYGETFFGHPTGRASDGRLNVDFIAEDFGVPLLPPYLGESKNFSHGANFAVVGATALDLAFFQKNNITSVPPFNTSLSVQVEWFHKLKPTLLQRLLREIALLHGRKYPSATIVFADYYDPVIEFMQKPDDFAFSDSSKLRACCGGGGGPYNYNATVACGLPGTSVCPTPNTSINWDGIHLTEAAYARIAACWLHGPHAHPPILAAHSPSNKMTLLLLLLLLLGCTHHGQANMYSGHPKIDSIFSFGNSYSDTGNFVKLAAPVIPVIAFNNLPYGETFFGHPTGRASDGRLNVDFIAEDFGVPLLPPYLGESKNFSHGANFAVVGATALDLAFFQKNNITSVPPFNTSLSVQVEWFHKLKPTLCSTTQGCRDYFERSLFFMGEFGGNDYVFLLAAGKTVDEAMSYVPKVVGVISAGVEAVIEEGARYVVVPGQLPTGCLPIILTLYASANATDYESGAGCLRRFNELARYHNAALFAAVSLLRGKHPSAAIVFADYYQPVIEFVRMPENFGFSRSSRLRACCGGGGRYNYNATAACGLAGATACPDPAASINWDGVHLTEAAYGRIAAGWLRGPYAQPPILAAHSKPVAFVLLLLLACLHYAQANPSRRPLVQSIFSFGNSYADTGNFVRLAAPLLPVIPFNNLPYGETFFGHPTGRASNGRIIMDFIAEKFQVPFVPPSLGQGEDFTHGANFAVVGASALDLAFFLHNNITSVPPFKTSLSVQLEWFHKLKPTLCSTAQECRDYFRRSLFFMGEFGGNDYVFLQAAGKTVEQLIPYVPKVVGAISAGIEVSYIFTDICRDTNYTYNPQFTNGIDVNYCVIDAFIQAVIKEGAVQVVVPGELPNGCVPIILTLYASKSRGDYDARGCLKKQNALARYHNSALFEAVSRLRHRYPWVKIVYADYYKPVIDFIKKPSRFGFSASSRLRACCGGGGGGPYNYNATAACGFPGASACPDPAASISWDGIHLTEAAYARIAAGWLRGPYAHPPILAAVRQ
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_01g0008000 | OsPr106_01g0008000.02 | Chr01 | 6356615 | 6375641 | + | IsoSeq | ||
| CDS seq | atggccgactcatcatcgacttcattgccgggcactttggagtccctttcctccccccatatcttggccaggtgcagaacttcagccatggcgccaacttcgccgtcgtcggcgccacggcgctcgacctcgccttcttccagaagaacaacatcacaaacgttcccccgttcaacagct |
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| Protein seq | MADSSSTSLPGTLESLSSPHILARCRTSAMAPTSPSSAPRRSTSPSSRRTTSQTFPRSTA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 5.298227 | 2.600528 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0216300 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g11750 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0216500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0008350 | RBH | 0.0 | 416.217285 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0008000 | SBH | 0.0 | 4.866177 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0008390 | RBH | 0.0 | 13.824759 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0007910 | SBH | 0.045696 | 3.667821 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0007990 | RBH | 0.0 | 2.344264 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0103600 | RBH | 0.0056315 | 0.3956025 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0007970 | RBH | 0.0 | 0.438153 | 0.046880 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0103900 | RBH | 0.027279 | 0.023326 | 0.003999 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0009380 | RBH | 0.0 | 0.201504 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0008000 | SBH | 0.0 | 5.738152 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0007980 | SBH | 0.0 | 5.848666 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0008010 | RBH | 0.0 | 0.702329 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0007880 | RBH | 0.0 | 9.029409 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G008010 | RBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0007860 | RBH | 0.0 | 15.383127 | 0.0 |
