Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_12g0544600 | OGI:12057280 | 3/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr12:21964712-21970027 | ||||||||
| Gene Symbol | ERF111, OsERF#111, OsERF111 | ||||||||||
| DNA seq | AAGAATAATCATTTCAGTAATATGGTAAAAAACAAGATGCTAGAGAGATCACATAACCCAGACATGATTACAGGACTAATCAATATAGCAGTAGAAAAGGAAAAGCTCACACGAACAAATTTAAAATAATCTATACATATAGACTACATTGGGAATTATTATTGACTACTGAAGACTGGCCTAAACTCATGTTTGCTTGGACTAGAACTGCCATATGTTGGTTAGTGACAGCTGCTTGTTCACTTTCGCTTGCCGAAAGAAACAGTAACACCCTGATGCCACCTGGCCATGTAGGAAAAGAAACCAAGTTCATCAGCAAAGACATGACATTTCTTTTGTTGTTAAAGAAGACATGGAGATAGCGAGCTGATCAATAGAATCTAGAAAGACAGATACCTTGCCAATGTAACTGCGTCTGCATCAAAATAATGGACCTGAAACTAAACAATATAGAGCAAAGAATGGACATGAACATGCATGAACAGGTTTTAATCAATCAGAAATAAATATAAACACAACGATTATTGCTATCTTTTAATAGAAAGAATAGCCAAGGTAACCACAAATTATTCATCCACTACGCTTGTAATCATATTTCTCACAAGAACATAATGTAAGATCATACTTAACCAGTGGACCTAATAGTTGTACCGTACACCAAAAAGGCAGAAAAGTTAAATTAAAAGACCATAAATATTGTTGGATTTAGATGCATTCAGTTGGATAGAGTTTTCGATAGTTCTAAAACTGGAAGCACCTTTGCTAACAAAAATAAATCCATCAAAAGGTTTTAGATCAGGTAATTGCATATACCTTGAAGTAATGAAATAAATCATGAAAGAGTAACTATTTTCCTCTGTTATCCTTCATTATTCAAAGCATTATTATCAACATCTACTGTTGTTCCTTCAACATCTGTTCTAACCCATTGCTTGTAATTGTTTGCATTACTGGACATTCCACCAAGGTGTGAAACATGGAATGGCTCAATTTCTATGTCACCTGCCCATTCATCCTCACCAATGTCATATATATCTCTAGGTTTGTTCTTCCTTACCACAGACCACCCAGGATTCATTGGATCATCGACATAATAAACTTGATCTGCTTGATTGGGGAAAATAAAAGGCTCATGCTCAACTTTTTCTCCAGTATGTATGAGATGTGAGAAGTTAACTAGTGTGTAACCATACTTATCTTTTTTAACTCCTTTTCCAGAAACAACATCAACCCATTCACATTTAAACAGTACTACTGAAAATTGTCCAGAGTAATTTAGCTCAATAATATCGATGACTCTACCATAGTATGTTAGATCACCCAATATTGGATTTGTGTCACTTGATTTAGTATAACTGGATGTTTTTGCACTTAGGACAACTCCGCTATTCTGTGTCACTCCATCCAAATGTTTAGGCCTAAACCGGAAGCCACGGGTATTGAAAGCACGATATCTTTTTGCTGGACCAATCGGACCACGAGCCAGCCATCTATGATCATTCTTGACACTGCATATGCCATTTTTCCTCTCTAGATCCATTATCTGTGTACATAGGATTACTTAGTCATGATTTTATTTGTTGATCTAAATGATAATAACACGAAACTTACATGAGCTCTGAACCATTCATGGAATTTTTCATTTTGGATACGCTCGATAATCTTTGGGGTGATGCGGCCTTGCCGATATGTTCTTCTAATCTCATCAACATGAGTTCTGTAAAAGGAAAAAGTGTCATGAAGTATGCTTTGAAGAAAATGATTAGTGATGAAGTGTATGATCTTGAGCTAATACCGAAGGTATGGGTTGACATCTGGACAGTTGAAGAGCACATATCTATGTGCTTGCATTTTAGTCAAGCCCCTAATAACATAACTTCTCGGCTTGCCAAGTGGTTTTCCAACATGAGGAAAAAGATATGGTGTGCATTCATCATCTGAACATGCAACTGACTCATCATTATCATCATTTCGTGTAGGCTGGTTATGCTTTGTCTCAAAACCTTCAAGATATCTTGAACAAAATGTCATACACTCATCTGCCAAATATGCTTCTGCAATACATCCTTCAGGATGTGCCTTATTACGCACATATGACTTTAATACACTCAAATACCTACATAAATAAAGAGAAAGATTAAAAATGTTAAAATTTCTATACTAGATAACAAATGAAATTATATTTGTGAGAGAAATGTACCTTTCCACAAAATACATACATCGGTAACACACAGGACCTCCTAATTTTGCTTCAGTGGCTAAATGAACAACCAAGTGCACCATAATGGTAAAAAAAACTGGTGGAAATATCATCTCCAAACGACATAATGTCATTTTAATTTGTTCCTCTAACTTGTCAAGCACATCAATGTACAGGACTTTTGAACTCAGTTCTCTAAAATATCCACATAGATCAAATAAGACAGAAGTGACATTGTAAGGAAGCACACCCCGCAAAGCAACTGGGAGAAGTTCTTGCATTAGAATATGACAGTCATGACTTTTAAGACCTGAAATTTTCCCTTGACTAACATTTATACATTTTGAGATGTTTCCTGCATAGCCATCTGGAACCTTAATATCATGGAGAACTTTGCAAAATTGATGTTTCTCCCGTTTAGACATTGTATAGAAAGCAGGAGGCAAATAATACTTATTATTAGCTTTTCTTATGGGATGCAAATCTGGCCTTATATTCATTTCTTGTAGGTCCAAGCGTGCTTGTAAATTATCCTTTGATTTGCCTTCCAGTCCTAACAATGTCCCATATATGTTATCACAAACATTCTTCTCAATATGCATTACATCAAGATTATGATGGAGTACATTCAAGTCCCAGTAAGGCAACGAAAATAAGCCACTACGGCATTTCCATGTTTTTGACTTCTCAAAATCATTAATTTTCTCTATCTTTTGTAAAACTGATGTTTCAGAATAAGCAAGAGGTTCTACTCTATGTTCTTCAGTTCCATCAAAAGAATTTTCATTATATCGTAATTCATGGTCCAGAGGAAGAAATCGACGATGTCCCATGAAACAATACTTGTGTCCATGTTTCAAACGTTTAGAGCACGTTTCTTCATGACACATAATACAAGCAAATTCACCATTGACACTATATCCCGCAAAGATCCCAATCCCAGGATAGTCACTAATAGTGAACAGTACTGTAGCACGAAGCTGAAACATCTCGTTTTGAGATGCATCATATGTAGGAGTTCCAACCTCAAATAAATCAAATAACTCTTCATAAACTGGTTCCATAAATAAATGAAAATCCTTTCCAGGGTAAGATGGACCAGGAATTATTAGTGCAAGCATAATAGAAGATGCTTTCATGCATAACCATGGAGGAAGGTTATATGGAATCAAGACAACTGGCCAACAACTATAAGTTGAACTCAATGTCCCAAAAGGATTAAATCCATCACTAGCCATTGCAAACCTAATGTTTCGAGAATCCGATGCAAACTGGGGATTCCTAGAGTCAATGGACTTCCAAGCCTCTGAGTCAGCTGGATGACGCAACACACCATCCTTTGTACGACCCTCATCATGCCATCTTAATGCTATAGCTGTTTCCTTGTGCATAAATAACCTCTTAAGCCTTGGCTTAATTGGGAAGTACCTTAACACTTTCCTTGGGGTTGCCCTTCTCCTTTCCTTCTTTGTTAAAGTAGTTTTATCTTCTTTGTTTTTCCACCTTGAAGTACCACATTTTGAACAAAAGTCATCGTTTGCCTTAGCTTTCCTATAAAGCTGGCAGTTATTTGGACAAACATGAATTTTGACATAATTAAGTCCAAGCTTTCCTATTATCTTCTTAGCTTCAGCAAATGTTCCAGGTAAATTCTTACCATTTGGAATTGCTTGTTGCAAGATTGCTAGCAAATCATTTAATGATTTATTACTCCACTTGTTAACTGATTTTATGTGAAACAAGAGAACTAGAAATGACAGCCTTGTAAGTTCACACCCTTCCCACAAAGGGTCATGAGCATCTCGGAGCAAGTCATAGAATGCTTTTGTTTCATGGTCTGGCCCACTGTTTAAAAAATTTTGTACATCATATTCATTCACTGGAGGGTCATTGTTTGTGTTCCCAAAAGCATCTTGCACTAGTTGGCGCATGTTACCATCCATTCCTCTACTTTGTGACTCTGTTCCCCTACTGTTGGCAGAGATGAATGATGTGGTTTCACCATGACAACCCCATGGACTATACCCAAGTAACATTCCATGACATACTAAATGATCATACACTTCATCCCGCGTTAATAACCACTTGTTGACACACTCCTTACATGGACATCGGATCTTATCTTCAAGACTCTTTTCCCTATATGCAAACAGAAGAAAACCATCTATTCCAGCAAGGTACTCATCACTTGGTCTAGGGAAAAGCAATAACTTCTTAATATTATTCAAATCCATCAATTTTCTGTGTTAAAATAAGAAATATAGTTAATACATGAGTGTTCCTAATTTGACAACAACCACTAAATATTTTTGATTCTATAATTATGCCTTCAAGCCAAAAGAAATTTGTCTACCGAACATGTGTAGGTGAGGTTAACTGTACCTGGAAGCTTAGGATTAGGATCCAGTAGATACAGCGTCGATGCAGCCCTGATGCTTGTTTAATTGAACCAAACGAAAACGACCATCTTATCTACTGGCTAGATCAGAAAAATAGCAAAGCAGTACATGAGTGGATCAGACATTGCTGCAGATGGGATTGACAAAAGCAATCAGAATAAAGAATTAAGGACTTTACATGATAATTGAGGAATTAAACTGCACTATGAGCCAATATTTTTGGTTGTACAGATTAAATTATATGGTTAATATAAGAGTTTCTGTGAGCTAGATTAAAAATTGAAACAATAAGATGCAGGGTAAAGTTTTAAGATGCCATCTGCGTACAAGAAAAATGACAAACACTTGGTGTGCATAGAAAAACTTAGTGCTTAACAATTTGCTAACCTGCCGTCATATGCACTTGACTGCCTTAGGGTCTTGACCGTCTTGATCACCAAGCACAGATCCACCAACACCAAGTGAAAATGTGATGGTGAGGTCGCTGTTGCTGATGTGTGGCACGCACAAGGGACATGTAACGGGGACGCACGGAGGATGCTAGCCACACCGCGCGAGTCGGAACTGGACCTGGATTCCTAGGGATAGGCCACCGGGGCGGCTAGGGCACGTCTGCACCGGCGTGGAGGCGACCGGTGGCCAGCGCTGCAGGGGCTCGGGCCTGTTTTGGTGGCTCTCGTCAACGACGGAGTGCTGGGGAACGAGACTAGATTGGAT
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| CDS seq | ACAAGCATCAGGGCTGCATCGACGCTGTATCTACTGGATCCTAATCCTAAGCTTCCAGTTTTTTTTACCATTATGGTGCACTTGGTTGTTCATTTAGCCACTGAAGCAAAATTAGGAGGTCCTGTGTGTTACCGATGTATGTATTTTGTGGAAAGGTATTTGAGTGTATTAAAGTCATATGTGCGTAATAAGGCACATCCTGAAGGATGTATTGCAGAAGCATATTTGGCAGATGAGTGTATGACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAATGATGATAATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCATGTTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTATCGAGCGTATCCAAAATGAAAAATTCCATGAATGGTTCAGAGCTCATATAATGGATCTAGAGAGGAAAAATGGCATATGCAGTGTCAAGAATGATCATAGATGGCTGGCTCGTGGTCCGATTGGTCCAGCAAAAAGATATCGTGCTTTCAATACCCGTGGCTTCCGGTTTAGGCCTAAACATTTGGATGGAGTGACACAGAATAGCGGAGTTGTCCTAAGTGCAAAAACATCCAGTTATACTAAATCAAGTGACACAAATCCAATATTGGGTGATCTAACATACTATGGTAGAGTCATCGATATTATTGAGCTAAATTACTCTGGACAATTTTCAGTAGTACTGTTTAAATGTGAATGGGTTGATGTTGTTTCTGGAAAAGGAGTTAAAAAAGATAAGTATGGTTACACACTAGTTAACTTCTCACATCTCATACATACTGGAGAAAAAGTTGAGCATGAGCCTTTTATTTTCCCCAATCAAGCAGATCAAGTTTATTATGTCGATGATCCAATGAATCCTGGGTGGTCTGTGGTAAGGAAGAACAAACCTAGAGATATATATGACATTGGTGAGGATGAATGGGCAGGTGACATAGAAATTGAGCCATTCCATGTTTCACACCTTGGTGGAATGTCCAGTAATGCAAACAATTACAAGCAATGGGTTAGAACAGATGTTGAAGGAACAACAGTAGATGTTGATAATAATGCTTTGAATAATGAAGGATAA
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| Protein seq | TSIRAASTLYLLDPNPKLPVFFTIMVHLVVHLATEAKLGGPVCYRCMYFVERYLSVLKSYVRNKAHPEGCIAEAYLADECMTFCSRYLEGFETKHNQPTRNDDNDESVACSDDECTPYLFPHVGKPLGKPRSYVIRGLTKMQAHRYVLFNCPDVNPYLRTHVDEIRRTYRQGRITPKIIERIQNEKFHEWFRAHIMDLERKNGICSVKNDHRWLARGPIGPAKRYRAFNTRGFRFRPKHLDGVTQNSGVVLSAKTSSYTKSSDTNPILGDLTYYGRVIDIIELNYSGQFSVVLFKCEWVDVVSGKGVKKDKYGYTLVNFSHLIHTGEKVEHEPFIFPNQADQVYYVDDPMNPGWSVVRKNKPRDIYDIGEDEWAGDIEIEPFHVSHLGGMSSNANNYKQWVRTDVEGTTVDVDNNALNNEG |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_12g0544600 | OsNip_12t0544600-00 | Chr12 | 21964712 | 21970027 | - | RAP2018-11-26 | ||
| CDS seq | ACAAGCATCAGGGCTGCATCGACGCTGTATCTACTGGATCCTAATCCTAAGCTTCCAGTTTTTTTTACCATTATGGTGCACTTGGTTGTTCATTTAGCCACTGAAGCAAAATTAGGAGGTCCTGTGTGTTACCGATGTATGTATTTTGTGGAAAGGTATTTGAGTGTATTAAAGTCATATGTGCGTAATAAGGCACATCCTGAAGGATGTATTGCAGAAGCATATTTGGCAGATGAGTGTATGACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAATGATGATAATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCATGTTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTATCGAGCGTATCCAAAATGAAAAATTCCATGAATGGTTCAGAGCTCATATAATGGATCTAGAGAGGAAAAATGGCATATGCAGTGTCAAGAATGATCATAGATGGCTGGCTCGTGGTCCGATTGGTCCAGCAAAAAGATATCGTGCTTTCAATACCCGTGGCTTCCGGTTTAGGCCTAAACATTTGGATGGAGTGACACAGAATAGCGGAGTTGTCCTAAGTGCAAAAACATCCAGTTATACTAAATCAAGTGACACAAATCCAATATTGGGTGATCTAACATACTATGGTAGAGTCATCGATATTATTGAGCTAAATTACTCTGGACAATTTTCAGTAGTACTGTTTAAATGTGAATGGGTTGATGTTGTTTCTGGAAAAGGAGTTAAAAAAGATAAGTATGGTTACACACTAGTTAACTTCTCACATCTCATACATACTGGAGAAAAAGTTGAGCATGAGCCTTTTATTTTCCCCAATCAAGCAGATCAAGTTTATTATGTCGATGATCCAATGAATCCTGGGTGGTCTGTGGTAAGGAAGAACAAACCTAGAGATATATATGACATTGGTGAGGATGAATGGGCAGGTGACATAGAAATTGAGCCATTCCATGTTTCACACCTTGGTGGAATGTCCAGTAATGCAAACAATTACAAGCAATGGGTTAGAACAGATGTTGAAGGAACAACAGTAGATGTTGATAATAATGCTTTGAATAATGAAGGATAA
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| Protein seq | TSIRAASTLYLLDPNPKLPVFFTIMVHLVVHLATEAKLGGPVCYRCMYFVERYLSVLKSYVRNKAHPEGCIAEAYLADECMTFCSRYLEGFETKHNQPTRNDDNDESVACSDDECTPYLFPHVGKPLGKPRSYVIRGLTKMQAHRYVLFNCPDVNPYLRTHVDEIRRTYRQGRITPKIIERIQNEKFHEWFRAHIMDLERKNGICSVKNDHRWLARGPIGPAKRYRAFNTRGFRFRPKHLDGVTQNSGVVLSAKTSSYTKSSDTNPILGDLTYYGRVIDIIELNYSGQFSVVLFKCEWVDVVSGKGVKKDKYGYTLVNFSHLIHTGEKVEHEPFIFPNQADQVYYVDDPMNPGWSVVRKNKPRDIYDIGEDEWAGDIEIEPFHVSHLGGMSSNANNYKQWVRTDVEGTTVDVDNNALNNEG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0768600 | RBH | 0.523054 | 0.854246 | 1.589102 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g35940 | RBH | 0.115888 | 0.216573 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0544600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0289500 | RBH | 2.2000215 | 0.8019965 | 5.831212 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0411800 | SBH | 10.21922 | 18.670108 | 5.9032415 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
