Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_12g0148400 | OGI:12006480 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr12:2372976-2382829 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AAAGGTAACAAAATACTTCATTCCACTCATAGAGACCATAGGTGAAGTCCAAACATCTGAGTGAATTAGCATAAATGGTAACATACTTCGGAGTCCTCTACTCACATATGATGTTCTTGTATGTTTTCCATACTCACATGCATCACATACTAACTTATGTTTATCCACTCTACTTAGTTCTGCTGGAAACATCTTACTCATAGTTTCAAAAGATATATGCCCCAATCGACAATGCAAAAGTAATACCTTAGCCTCTTCTTTACTTGTAGAAGCCATCAATGCAAGACATACATCTTCACTTGTCTCCTTTCGATCCAAATACCAAAGTCCATCACGCCTGACGCCAGTCCCAAGTTTCTTCCCTGTTTGCCTCTCCTGAATTAAACAATTCTCACGATCAAGGGATACCCGACAATCCATACGATCAACAAGAGAACTTATTGAAATCAAATTCACTGGAAAAGAAGGGACATATAACACTGATGATAAAGTGATTGAAGGAGTACATTGTACTGTTCCCTCTCCCTTAACTGGGCATGATGTTCCATCAGCAGTTTCAATTGTTTCTTTTCGTGTAAATGGGTATGGTTTATATGATGCAAATTCTCCACACATACCCGTGACATGTCTGGATGCACCCGAGTCAAGTATCCAATTTGAATGAGAACTATTGATTGACATAAATGCTTGGTTTGAGTTACCTGAGATAGAATGAACAAGGTTGGCAACATCAACATTTGTAGGTCCAGAACAACCCTCTTCAAGAGTGACCACATTAGCTCTGTGATCACCTCTATACTCATAGCCTCTACCTCTGTTAGCTCTACCTGCATAACCTCTTCCACCTCTTGCTCCACCTCTATCACCACTTCTTCCTCTTCCATAACTAGGCTTGCAAGGAGCACGACAATCACGCATGAGATGCCCCATTTCACCACAATTAAAACACTCTCTAGTCTCTTTACCTTGTAGCATTGCATAGGTGGGACTTGATGAAGGTGGTGTAGCCTTAGGCAATACTTTCCTCTTAAGCTCATCTTGAGCCATAGCTGCTATAGCCTCATCCAAGGTAGGAAGAGTAGTCTGATGGAACATAGCATCTTTTCTCCCTTCAAACTCTGGATTTAGGCCTTTCAAGAATTCAATAACCCTTCTGCGCTCAATCCATTTCCTCATTTTTGCTATACAATCGGGGTGCTCTAACCCAAGAGGATCATAATGATCCAAATCAGACCATAGATGCTTCAATTCTGCAACATATTCTGCAATAGAACGCTCCCCCTGTCTCAAAGCACTTATCTTCTCCTGTGCCTCCACCATTAGCATCACATTTCCTTCTCCTGAGTAGAGATTAGTGAGAGTTTTCCACATCTCACTTGCACTTGAGATGGTCTCAACAGTTGTAGCAATAGCAGGGATAAGTGAAGTCAACAACCATGCTACTACTAAAGAGTTGGTAGTGCTCCAAGTCCTCCATTCTGCACTAGCACTCTCAGGCTCCTTCACTTCTCCGGTGACATATCCTTCTAATCCCTTAGTCTTCAAAATCAACAATGCTCTCCTTGACCAACTTAAATAATTTTTGACACCCTCCAACTTAATATCATTTTGCATCAACTCAATTTTTTGCATTGTTTCAGTATGAGGAATCACTGCATTACTTGTAGTTGGGGCCTCACTAAATTTCTTTGCAAGCATGTCCACCAATTTACCCATCACTTGTTCAAGTCCCTGATTTTCCCCCATTTTAATCAAGCAGCACTCAACTAACTGCTGTAACAAAGCAAACTCTCCTTGTCTACACTCCACCAGCAGCACTAACAACAAGCCAACAATTCCTCTACCCTGTATTTTCTTCCCAGTAAATCAGTAGTAGCAGCAAGAACAATCTCGATTACCTCAATCTTGAAGAAGAACAACAGTAACAACAGTCACTAGTGCTTCTTCCCTCAACCACAAGCCACAGTACAGAGTCCACCACCAGCCAACAAGCAGAAGCACGGCTGGGAACCAACTCAACAAGCAGAAGCACTGCCGGGGAACCCACTTGTAGCTGCTGCCCCTCCAGACCTCCCTGCTCAGCTCACGCACCTGCTGTGTGTTGCCGTCACCGCCGCTCGCTGCAGCAGCCGTGAGCGTCCTGACCTGCTGCGCCTCCAGTCCACTCCTACTTGTCCCTGCTCACCGTCCTACACCACCACCAAGAACTCCAACCTCAGCGCTTGCTCCCTCAGCTAGGGTTCGTCGCCGCCGGCCGCCAGGAGCACGGCTCTGATACCATGTAGTTTGTGAATTTTTCTCTGGAAGCTTCACCCCTTCAGTATTGCTATCGTTATTTACATATACATGAGTAGATGGGCCTCTAGCTGATGGGCCAGCACACAAACACACACACACACTATTCTATTTACAGCCCAACATATAACATACCTCAAATCATCGAATTAGGCTAAAGATTCAAGGAGGATGAAATAATATTCAGTAACATAAATAGGAAGGAGCAGGGATCCAAGCAAAATCACCTTCTTTATCACAGGTGGCGCCTTCAAGATGTCTCGCACTGACCAGGACATCATCCGGTCAATCAAGAACTCCAGGTTGTGGTCAATCCTGCCATGCCGGTGATGGCAGCCAGTGACGAGCTCCTCATCACAGCCATCCCCACCCAAATTGTCACTGTTGTTCCCGCCCCCACAAACCTCATGCTCCAGGCTATGGTTGGTCCTGCCATTGCAGCAGCTGCCAAGCTCCTCATTGATGTCAGTTGTGTTTTGACATTGTCTTCCGTACCCTGATGGAGGATTTTGATCAAATATTGAAGTGAGTTCAGGGAGAACATACAATGCAGCAATGCTTAAAAGGGTTGAAGCAATACCAAGCAGACGTGGGGCTTCTTCATGAGTATCAGCATGCAGTAAAGTTCTTGGCCAATCTAATCGATTGACATAGAACGAGGATACCATCTGAAATTATAAAAGGAAAAGGTGTAAACATGTGAAGAAAGCATAATTTGTTTTAACAGACAACATAGAACAAATAACATAGAGCAGAAACCTTTGGTTGACGAGAGGAAATATCAACCAATGACTTCAAAGCCAATGTATGAAGTTCACTAGACCCATCATATGACATGGCATGTTCTAAAAGCACACACATTTTTGCTAGTGTAGAATTAGATAGATCTTCTTGAAGAAAATCTGAGCCATCATGTGTGTTAAAGCACTTCATCAGAAACTTTATCATTGCAAGAAATGTGTCTGTTGGGAAAAGCAGTTTTCCATTCCTCTGCTCATAGCAATGCAGCAGCTGAGGCTGTTGGCTGTAAATATAATTCACCATTTCCGCAATATCAGGATAGCTTATATCCGTGGCCATTGTAGATGACTGCCTTTCATCATTTAACAGATTTAGACCTGCTAGAGCCATTTCCCTGGGGACAGCATAATCACATAGTTTATTTTTTATATATTAAAAAAAAGCTAAATGAAACCAACAGCAAAGAAAACATGATGTAAACAATTCAGCATAACATTTATCATCTTTTCTAACAAACCTTATATCTAGCTTCACATCTGAAGCACCAAGCATGCAAATGTATCGGCTTGGGCAGTGCTTCATATTGTATAACGTCACTGCCCATCTTACAGCAGAAAACCGGACCTCACTTTGCTCCTTGAAGAAAAGTTAGGATAAGAAATGTAAAATCAGAAAAGTATGCAAAACTAAACAGATAAAAAGTTGTATTCCTCAAACAGTAGGGTTTCAACTACTCATTATTAATTAGAAGAAATAGTTATATTCAAATAAAAATTCTCATTATTAATGTTCCATCTTTTTGAATTATTACTTTCACGTACATCCAACTGAGTCTGAGGAAAAAAATTAAAAGTAATGCCTACAAATACAACAATAGATAGGAAAACTTTCCATTTTGGTGAAGACTGTGGGTTCTCGAGTATTTAAGAATCTACATTGAACAGAACACCAAACTTTACCGCTTGACAATATTCCAGAAGAAGTGCCTCAAAATCCTTCAGTACTATATTCGAAGCACCCTGGTATCAAGGCCAAGAAATGGTAAACAAAAATCACGAAAATATCTCCAGAAAAAGTGGAGTAACATAACAAACATATGAAACACGCTGAAGACATTATGGAGTAACACAAAAAAGCAATAAATATATATGCAAGTCACAAGTAAGCGAAACCCAAAATGTCAAAAAATATTTCTTGTTTCTGCCCTGCGTGTCGAATAGTCTCTAATGGTTACCTTTATAGTTATAGATCAGACACCAAGAATATCTCAACTAACGACTATCTCATGATTAAATTTATCTCTTAACCAAACCTAAGAATATGTCTGCTGATCTATGTCAGCAAGCTGAACTGCTAGTCTCATCCCTCAACTGCTAGCCAATCACTGCGTGTACCTAGCTGCCACTATTCCATAGTCCACAAAGCCCATCCTTACACCCTCAGTCCATGGAACATGGAGCACTATCTTTCTACTTCCTTCCTGGCTCTTCCTCAGCCCACAGCATAACTGTTAGTACACTGCAGGCATTACTAAATTTGCTCTCAGGAGATGAAATAGATGCACTCTGTTATAATTAGAACTAATAACACTTTCAACTATTAACTATTTCAAGTCACATGCAAGTGATTTGAGCATCTGCCTAGCCAGAACTTGGAGGTCATATGTGTGTGTGTGTGTGAATGTATGGGGTTAGTTCATGTTGGTCGTAAAAGGCATGAAATTGGCTTGTGTGTATTTTAAACAACTCCCTGGCTAATCCAATTGCAGAAAACGAGGACAGAAGCTTAAAAGTTGCCATGGCCCATGTGCTTGATTTAATCCTGCTAGTGTGTAGATTGTAGCATGTATGGACCATGGGGCGTCAGAATCCGTTCATATGCTTCATCAACAATATACTAATAGTTTGTATTGCATCAAGTCATCACCCATCGCCAACAAAAAAAAAAATTCACTATTCAAAATTACGAGACATGTCAGGACAGCAGTACAGCACCCTTTAGGGAAATTAATAACCTTGAACTGCAATTCACAATCATCTTTGCCAACATTTTTAACAGATCAGGACAACAGGAGAGTACCCTTTTGGAGAAATTAGCATATCATCCACAATACCTTATATGCTGTAGCAAGGGCAGTAGCCGCCTCCTGAATTATTGAACGAAGAGATTGCTCCTCCAATCTTAAAGCAGTAAACAGCCGTATAGCCATGCCAGTTTTGTTGCTGCAATGATCATAACAAGTAGAAAAATTCAGTCTCCACTACAGAAATGAAGCATGAATTGAGAAAGCAGAAGAGTAAGAAAAGCGCATACCAGAATAAATTAGGCATGCGAAAGGCAAGCAAACCAATGGCCTGGTATGCAAATATTCTGATATCCCTACTGGAAGAATCTGGACATGAAGGAAATCAATAAATCATTCACTGTTTTCTAAACTTATTTGACATGGCAAAATGGGAAGTCAACAAGTAATGTAAACGAAAAGAGTGCCAAGATAAACCACATGCACGTCTTAACAAGTAGAGTCGATGAAATGTAAAACCTGCTTCTGTAGTGGAAGAACCATCAAGTGAATGTAATATTCCACTGAGAATAAATGGACTGATTGCCTTTAGCTGTTTGTTTGTTGCCTAAATCAATAAGGAAACAGTGATAATTGATAAAAGTTTGAGACCATGAAAAAAGGTTGACAGAAAGGGAGAACTGCCAAGAGTGAAAAAAAAAACTAAATTTGGAATGGCACAAGCAATTAATGCTAGAAGCTACAGCAATCAATATATGGTGAAAACAAAGGAAGTGCACCTACATGTTTGAAAACCCAGACGGTGAACTCCATCCCTAACTGCTTCAATCTTGAAGTGGTTCCATTTCCTGCAGGTATGTAAACACAGGAGGTAGAAATGAGAATTTACCAACAATGCATAGCATGAGCAACATAACAGATAAAATTTCAGATGGGATGAGAGTTGATGATAGATTCACAAAAATACCACTTAGAACTATCAAATATCAGAGAATTTGTGTTCCATATAATAGAAAATAGACACTTAAAAGGAACTGATGTGTTTATCTTGCAATTCCCTCTTTAAGGAAGTGATGCATATATGTGTTATGGGCTGCACCATTGATTTGGGTAAGGATTATTAGTTTCTACATTAGATGCTTCATTGAAGTTGATTGCTATAATCTTCAAGGTTTGCTTTTTAATTAGTTTCTTTCATTTGGGTTCGAGCACCTCTACATAAGGAGGCCACTATTATGATATTAACAATACCATTGAGTCATTGAGTGAGAAAAAAATGTCAATCAAGTTCTTCCTCAATGTTCTTCAACCCAGATTCCCTGTCTGTCTACCTCTCATCCCTGGGAGCCACTGCCATCTTGCAATCCTCCTGATGGTGTTCATCCTCCATGAACCCTAGCCCATCCCTTTGAGCTCTCTTACTTGTGCCAAATATCAATTTCTAGGCCGATGCTTGATCGGTTATCATTTTCTTATAATGTATATTGTACATTGTTGATATTAGCAATTTTCCAGAAGGTCATACTCTACTGTACTGTTGCTAGCTTTCCATAAAACTCTAGAAGATGCTTAAAAGAAAAACTATTGAATATAAAATGACAAACATAGTCAATTTCTCTGTCCTACTTAAAGATGCAGCCCATTGATGATATAATAATCAAAACTAGGATAAAAATACATTCGTTAATGTCATGACGACGAATAAGGTAAATAAAATATATAAAAACAGAATACCATAGATGCAACCAAAAATGCACTGAAATGTGTGTGTGAACGCGTTTGCTGCAGCAATCGATCGGCAGAAAACACCCATAAGGCGGACTCGCAATGAACTATGTGCTGGGGCAACTTCCAACTCTGAAGCTATATTTTCTGAGCTTGCAGTACCTGCGGCACCAGAGAAAAATATCATATACCAATTACCAAACCAAACCACAAATATTTAGATTGGTACTGATAAAAACAAGCAAAAGATTTTGACAAAACAAGTACTGACAATCTGACATCTAAAAGCGAAAAAGAAAAGAGAAGCATGTGCACATGTCGGTATATGAGAGTGCAATGTGAAAATGCAGGGCCTGTTAACATACAAAATCATTTACAAAATATAAGGCTTAGTTTGGATGAGAACAAGGATTAAGAAGGGTATGAAAACAAGAGAAGAAGAGGAGGACATGACCTTGTATGTTGAAAATATGAGACCATTAGTTATAATTGTAAGGTGATAGAGAAGATAGCGTAAAAAAGGATCACTAAATTATCATGCATGCTTTATATTTTAAATGAAACTTGTTGGACGATAGACACCTATATCCCCTATGGCATCGGGAGTAGGCTAGACGAAATATGTTCATGGAATATACACGTGAAATGTACCTAACTTGCCCTAGTTAGGGCTATGAGAATGAGGGCATAGTCACCTCAGCAAAGGAAAAAAAAAATGTCTCAGGTTGCCAACCTCGAGGACAGAATAACTTATGCCACACAACAAAAATGATAATACATAAGAACAAAGTGACAGTTAAATACTGAAATAAAATTGATTGAATTAGAATCCTCCAAATTATGCATACCATTGAATAGTGTGAACAATCTCTTGATAAGGTCGGAATCTTCTAAATTCACAGCTGAAGCTTTGAGTATTAGCATTTCCTCTCCTCTCTTAGCAACTGCCTCTTGACTTCATGAAACAGGGATCCGCATGATTGTTGATCCATACAAACATTTTAGCAGATTGAATCTTTCTTTTTAAAAAAAAAGTACCTATCTGAAGCAGCCGCTAAATAAAGAGGGTAGACGATCTCTAGTTTGAACTGCATAGTTTCAATGACATCCAAGATTCCTAACTGAAGATATTGCAAGTGAGGTTCAACTGTAAGAAGCTGCTGGTACTACAGTACTACACTCAAGACTAAAATAGAAAAATGTGTGAAGACTTATGCTGACATGATTGTACACACAGGCATAACATGAATATGGGATACCTAATGTGAAACACATGCATTTATTTATTACCTTTCTTGATGCAAGTGTATCGCCTTTTAGTGGCAAATTTCCAGTAACACGATCCGATTGAGCAACTGAAAGCCCTGCCGAGCATCTGATACTGAAGATTGATATATGTCAACTCTCCATAATAAATAAAAAATGTTTCATACTTATACCAAGTTTAGCAAGGAAACCAACCCCTGAGGTGGTGTTTGATACAGTATCATGTGCAGACAGAAATCAGCAAAGACTAGGCCATCATTAGATGCGCTTATGGATTTGTACTTTGAAGCAACAGTCTGATCCACCTTATGTGTATCCCATTCACCAATAGCCTGGCAACAATTTAAAAAAAAAAGAAAACTAGCAAGTTTTTTAGGATGAAGATACGTCAGAACAAGAAAAGGAAACCACGGATAACTTATCGAAGATCATTGTAGACTTGACTAAAAGTGCAGTAAATTCAATGCCATCGGTCTGATGATAGAAAATAAGCTGACAATGATTCTTATTCCAGAGAAAAAATGCAATTCTGTTAAGATAAGGTATTGAACAATATTTGCATGTACAACCAAGTATATTCATCAACTTTATAGATTTTGACTGAAAGGGTGAGATTTAGCAATTGCCGGGTCCATGCATAACCTAACCTACATAATTGTCAGGTCCTTTCCCTGAATTGTTCAATGGAAACCATTTAGCCATTCCGCCTTTTTTTTATGATCATGTGTAATTGTATAAAGTCAGCGGAGACTGGAGACCAGTCTTAGTAAAATTTATAAAGCAACAGAAAGTGTGACTAACCTTCAACACAAGTCTCAGGATAATTCCCTGATGTTGCTCTGGAACATTTGATATGTTGATTAAAAGATCAGGTGCTATGATTGCCTTATCCTGTTACATAATGTTAACTTTATGTTGTTGGCTTTTGCAGAAAAGTTAAAACAGCTGAGAAAATGAGACATAAATGAAACTGAATAGGATACCTCACTTAGTAGACGCTCAAAGCCCATCTCAACATAAACAATGCAATAGTTTTGAACAACTGTTGAGGTAGATTCAGTGTAGATCCTCCATAGATCCATCATCATTGAAATATCAGGCCTTTGCTTTACCAGTTTGTCAAAGAGACTGCCATTTTCCATAAGCTGATGGAACCAAAAAATAAAAATCGTTTCTATTAAATATCATCGGCTCATCGCCTCATTGACATGAAAATTACTATGTTATAACGCATGCAAAGAACAGATGGAAAATAGTACTAGTACTGCCCTTTTCACCCCCTGAACAGGTTCAGATTATGTAAACAAATGCAAGTAAATCTCGCAACCTAAAGCACAAAGTTCTCTAATCTAATTATAGTGTATAAATAGAAGATTATTTGTACATGCGCGAATTATTCAGATAGTTTCATAGACGCTATTAATCAAATTTCAACGCCGTGTGGACAAATTGTAGCAGTATCATCGCCAACCAAACGATCAACTAAACCAATCGAAGCAGGAAAATTCAACATATACGTATGCATACTAATCCGAATCGACACAGGGCCTGAGGAGTGGTGTACTTACGAGCTCACGGACAGACGCGCCAGGGGAGACGAGCGAAATGGTGGTGTAGGGGAGAAAGCGGCAGAGCAGCGACGCGACGGAGTCTTCGGTGAGGGCCAGCCTCGTCAGCATCCGCTCGAGCGCATCCACCCTCCCCGCGTGGGTCTGACCCGCCGCCGCCGCCGCCGCGGCCGGTGGCGATGGCTCCGCCACCGCCATTCTCCCGACGATGTTGGAGTGTTGGACTCGCACTCGCT
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| CDS seq | ATGGCGGTGGCGGAGCCATCGCCACCGGCCGCGGCGGCGGCGGCGGCGGGTCAGACCCACGCGGGGAGGGTGGATGCGCTCGAGCGGATGCTGACGAGGCTGGCCCTCACCGAAGACTCCGTCGCGTCGCTGCTCTGCCGCTTTCTCCCCTACACCACCATTTCGCTCGTCTCCCCTGGCGCGTCTGTCCGTGAGCTCCTTATGGAAAATGGCAGTCTCTTTGACAAACTGGTAAAGCAAAGGCCTGATATTTCAATGATGATGGATCTATGGAGGATCTACACTGAATCTACCTCAACAGTTGTTCAAAACTATTGCATTGTTTATGTTGAGATGGGCTTTGAGCGTCTACTAAGTGAGGATAAGGCAATCATAGCACCTGATCTTTTAATCAACATATCAAATGTTCCAGAGCAACATCAGGGAATTATCCTGAGACTTGTGTTGAAGGCTATTGGTGAATGGGATACACATAAGGTGGATCAGACTGTTGCTTCAAAGTACAAATCCATAAGCGCATCTAATGATGGCCTAGTCTTTGCTGATTTCTGTCTGCACATGATACTGTATCAAACACCACCTCAGGGTATCAGATGCTCGGCAGGGCTTTCAGTTGCTCAATCGGATCGTGTTACTGGAAATTTGCCACTAAAAGGCGATACACTTGCATCAAGAAAGTTAGGAATCTTGGATGTCATTGAAACTATGCAGTTCAAACTAGAGATCGTCTACCCTCTTTATTTAGCGGCTGCTTCAGATAGTCAAGAGGCAGTTGCTAAGAGAGGAGAGGAAATGCTAATACTCAAAGCTTCAGCTGTGAATTTAGAAGATTCCGACCTTATCAAGAGATTGTTCACACTATTCAATGGTACTGCAAGCTCAGAAAATATAGCTTCAGAGTTGGAAGTTGCCCCAGCACATAGTTCATTGCGAGTCCGCCTTATGGGTGTTTTCTGCCGATCGATTGCTGCAGCAAACGCGTTCACACACACATTTCAGTGCATTTTTGGTTGCATCTATGGAAATGGAACCACTTCAAGATTGAAGCAGTTAGGGATGGAGTTCACCGTCTGGGTTTTCAAACATGCAACAAACAAACAGCTAAAGGCAATCAGTCCATTTATTCTCAGTGGAATATTACATTCACTTGATGGTTCTTCCACTACAGAAGCAGATTCTTCCAGTAGGGATATCAGAATATTTGCATACCAGGCCATTGGTTTGCTTGCCTTTCGCATGCCTAATTTATTCTGCAACAAAACTGGCATGGCTATACGGCTGTTTACTGCTTTAAGATTGGAGGAGCAATCTCTTCGTTCAATAATTCAGGAGGCGGCTACTGCCCTTGCTACAGCATATAAGGGTGCTTCGAATATAGTACTGAAGGATTTTGAGGCACTTCTTCTGGAATATTGTCAAGCGGAGCAAAGTGAGGTCCGGTTTTCTGCTGTAAGATGGGCAGTGACGTTATACAATATGAAGCACTGCCCAAGCCGATACATTTGCATGCTTGGTGCTTCAGATGTGAAGCTAGATATAAGGGAAATGGCTCTAGCAGGTCTAAATCTGTTAAATGATGAAAGGCAGTCATCTACAATGGCCACGGATATAAGCTATCCTGATATTGCGGAAATGGTGAATTATATTTACAGCCAACAGCCTCAGCTGCTGCATTGCTATGAGCAGAGGAATGGAAAACTGCTTTTCCCAACAGACACATTTCTTGCAATGATAAAGTTTCTGATGAAGTGCTTTAACACACATGATGGCTCAGATTTTCTTCAAGAAGATCTATCTAATTCTACACTAGCAAAAATGTGTGTGCTTTTAGAACATGCCATGTCATATGATGGGTCTAGTGAACTTCATACATTGGCTTTGAAGTCATTGGTTGATATTTCCTCTCGTCAACCAAAGATGGTATCCTCGTTCTATGTCAATCGATTAGATTGGCCAAGAACTTTACTGCATGCTGATACTCATGAAGAAGCCCCACGTCTGCTTGGGTACGGAAGACAATGTCAAAACACAACTGACATCAATGAGGAGCTTGGCAGCTGCTGCAATGGCAGGACCAACCATAGCCTGGAGCATGAGGTTTGTGGGGGCGGGAACAACAGTGACAATTTGGGTGGGGATGGCTGTGATGAGGAGCTCGTCACTGGCTGCCATCACCGGCATGGCAGGATTGACCACAACCTGGAGTTCTTGATTGACCGGATGATGTCCTGGTCAGTGCGAGACATCTTGAAGGCGCCACCTGTGATAAAGAAGGAGAGGCAAACAGGGAAGAAACTTGGGACTGGCGTCAGGCGTGATGGACTTTGGTATTTGGATCGAAAGGAGACAAGTGAAGATGTATGTCTTGCATTGATGGCTTCTACAAGTAAAGAAGAGGCTAAGGTATTACTTTTGCATTGTCGATTGGGGCATATATCTTTTGAAACTATGAGTAAGATGTTTCCAGCAGAACTAAGTAGAGTGGATAAACATAAGTTAGTATGTGATGCATGTGAGTATGGAAAACATACAAGAACATCATATGTGAGTAGAGGACTCCGAAGTATGTTACCATTTATGCTAATTCACTCAGATGTTTGGACTTCACCTATGGTCTCTATGAGTGGAATGAAGTATTTTGTTACCTTT
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| Protein seq | MAVAEPSPPAAAAAAAGQTHAGRVDALERMLTRLALTEDSVASLLCRFLPYTTISLVSPGASVRELLMENGSLFDKLVKQRPDISMMMDLWRIYTESTSTVVQNYCIVYVEMGFERLLSEDKAIIAPDLLINISNVPEQHQGIILRLVLKAIGEWDTHKVDQTVASKYKSISASNDGLVFADFCLHMILYQTPPQGIRCSAGLSVAQSDRVTGNLPLKGDTLASRKLGILDVIETMQFKLEIVYPLYLAAASDSQEAVAKRGEEMLILKASAVNLEDSDLIKRLFTLFNGTASSENIASELEVAPAHSSLRVRLMGVFCRSIAAANAFTHTFQCIFGCIYGNGTTSRLKQLGMEFTVWVFKHATNKQLKAISPFILSGILHSLDGSSTTEADSSSRDIRIFAYQAIGLLAFRMPNLFCNKTGMAIRLFTALRLEEQSLRSIIQEAATALATAYKGASNIVLKDFEALLLEYCQAEQSEVRFSAVRWAVTLYNMKHCPSRYICMLGASDVKLDIREMALAGLNLLNDERQSSTMATDISYPDIAEMVNYIYSQQPQLLHCYEQRNGKLLFPTDTFLAMIKFLMKCFNTHDGSDFLQEDLSNSTLAKMCVLLEHAMSYDGSSELHTLALKSLVDISSRQPKMVSSFYVNRLDWPRTLLHADTHEEAPRLLGYGRQCQNTTDINEELGSCCNGRTNHSLEHEVCGGGNNSDNLGGDGCDEELVTGCHHRHGRIDHNLEFLIDRMMSWSVRDILKAPPVIKKERQTGKKLGTGVRRDGLWYLDRKETSEDVCLALMASTSKEEAKVLLLHCRLGHISFETMSKMFPAELSRVDKHKLVCDACEYGKHTRTSYVSRGLRSMLPFMLIHSDVWTSPMVSMSGMKYFVTF |
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| Function | Proteasome adapter and scaffold protein ECM29 [UniProtKB/Swiss-Prot:Q6PDI5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_12g0148400 | OsNip_12t0148400-01 | Chr12 | 2372976 | 2382829 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGGTGGCGGAGCCATCGCCACCGGCCGCGGCGGCGGCGGCGGCGGGTCAGACCCACGCGGGGAGGGTGGATGCGCTCGAGCGGATGCTGACGAGGCTGGCCCTCACCGAAGACTCCGTCGCGTCGCTGCTCTGCCGCTTTCTCCCCTACACCACCATTTCGCTCGTCTCCCCTGGCGCGTCTGTCCGTGAGCTCCTTATGGAAAATGGCAGTCTCTTTGACAAACTGGTAAAGCAAAGGCCTGATATTTCAATGATGATGGATCTATGGAGGATCTACACTGAATCTACCTCAACAGTTGTTCAAAACTATTGCATTGTTTATGTTGAGATGGGCTTTGAGCGTCTACTAAGTGAGGATAAGGCAATCATAGCACCTGATCTTTTAATCAACATATCAAATGTTCCAGAGCAACATCAGGGAATTATCCTGAGACTTGTGTTGAAGGCTATTGGTGAATGGGATACACATAAGGTGGATCAGACTGTTGCTTCAAAGTACAAATCCATAAGCGCATCTAATGATGGCCTAGTCTTTGCTGATTTCTGTCTGCACATGATACTGTATCAAACACCACCTCAGGGTATCAGATGCTCGGCAGGGCTTTCAGTTGCTCAATCGGATCGTGTTACTGGAAATTTGCCACTAAAAGGCGATACACTTGCATCAAGAAAGTTAGGAATCTTGGATGTCATTGAAACTATGCAGTTCAAACTAGAGATCGTCTACCCTCTTTATTTAGCGGCTGCTTCAGATAGTCAAGAGGCAGTTGCTAAGAGAGGAGAGGAAATGCTAATACTCAAAGCTTCAGCTGTGAATTTAGAAGATTCCGACCTTATCAAGAGATTGTTCACACTATTCAATGGTACTGCAAGCTCAGAAAATATAGCTTCAGAGTTGGAAGTTGCCCCAGCACATAGTTCATTGCGAGTCCGCCTTATGGGTGTTTTCTGCCGATCGATTGCTGCAGCAAACGCGTTCACACACACATTTCAGTGCATTTTTGGTTGCATCTATGGAAATGGAACCACTTCAAGATTGAAGCAGTTAGGGATGGAGTTCACCGTCTGGGTTTTCAAACATGCAACAAACAAACAGCTAAAGGCAATCAGTCCATTTATTCTCAGTGGAATATTACATTCACTTGATGGTTCTTCCACTACAGAAGCAGATTCTTCCAGTAGGGATATCAGAATATTTGCATACCAGGCCATTGGTTTGCTTGCCTTTCGCATGCCTAATTTATTCTGCAACAAAACTGGCATGGCTATACGGCTGTTTACTGCTTTAAGATTGGAGGAGCAATCTCTTCGTTCAATAATTCAGGAGGCGGCTACTGCCCTTGCTACAGCATATAAGGGTGCTTCGAATATAGTACTGAAGGATTTTGAGGCACTTCTTCTGGAATATTGTCAAGCGGAGCAAAGTGAGGTCCGGTTTTCTGCTGTAAGATGGGCAGTGACGTTATACAATATGAAGCACTGCCCAAGCCGATACATTTGCATGCTTGGTGCTTCAGATGTGAAGCTAGATATAAGGGAAATGGCTCTAGCAGGTCTAAATCTGTTAAATGATGAAAGGCAGTCATCTACAATGGCCACGGATATAAGCTATCCTGATATTGCGGAAATGGTGAATTATATTTACAGCCAACAGCCTCAGCTGCTGCATTGCTATGAGCAGAGGAATGGAAAACTGCTTTTCCCAACAGACACATTTCTTGCAATGATAAAGTTTCTGATGAAGTGCTTTAACACACATGATGGCTCAGATTTTCTTCAAGAAGATCTATCTAATTCTACACTAGCAAAAATGTGTGTGCTTTTAGAACATGCCATGTCATATGATGGGTCTAGTGAACTTCATACATTGGCTTTGAAGTCATTGGTTGATATTTCCTCTCGTCAACCAAAGATGGTATCCTCGTTCTATGTCAATCGATTAGATTGGCCAAGAACTTTACTGCATGCTGATACTCATGAAGAAGCCCCACGTCTGCTTGGGTACGGAAGACAATGTCAAAACACAACTGACATCAATGAGGAGCTTGGCAGCTGCTGCAATGGCAGGACCAACCATAGCCTGGAGCATGAGGTTTGTGGGGGCGGGAACAACAGTGACAATTTGGGTGGGGATGGCTGTGATGAGGAGCTCGTCACTGGCTGCCATCACCGGCATGGCAGGATTGACCACAACCTGGAGTTCTTGATTGACCGGATGATGTCCTGGTCAGTGCGAGACATCTTGAAGGCGCCACCTGTGATAAAGAAGGAGAGGCAAACAGGGAAGAAACTTGGGACTGGCGTCAGGCGTGATGGACTTTGGTATTTGGATCGAAAGGAGACAAGTGAAGATGTATGTCTTGCATTGATGGCTTCTACAAGTAAAGAAGAGGCTAAGGTATTACTTTTGCATTGTCGATTGGGGCATATATCTTTTGAAACTATGAGTAAGATGTTTCCAGCAGAACTAAGTAGAGTGGATAAACATAAGTTAGTATGTGATGCATGTGAGTATGGAAAACATACAAGAACATCATATGTGAGTAGAGGACTCCGAAGTATGTTACCATTTATGCTAATTCACTCAGATGTTTGGACTTCACCTATGGTCTCTATGAGTGGAATGAAGTATTTTGTTACCTTT
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| Protein seq | MAVAEPSPPAAAAAAAGQTHAGRVDALERMLTRLALTEDSVASLLCRFLPYTTISLVSPGASVRELLMENGSLFDKLVKQRPDISMMMDLWRIYTESTSTVVQNYCIVYVEMGFERLLSEDKAIIAPDLLINISNVPEQHQGIILRLVLKAIGEWDTHKVDQTVASKYKSISASNDGLVFADFCLHMILYQTPPQGIRCSAGLSVAQSDRVTGNLPLKGDTLASRKLGILDVIETMQFKLEIVYPLYLAAASDSQEAVAKRGEEMLILKASAVNLEDSDLIKRLFTLFNGTASSENIASELEVAPAHSSLRVRLMGVFCRSIAAANAFTHTFQCIFGCIYGNGTTSRLKQLGMEFTVWVFKHATNKQLKAISPFILSGILHSLDGSSTTEADSSSRDIRIFAYQAIGLLAFRMPNLFCNKTGMAIRLFTALRLEEQSLRSIIQEAATALATAYKGASNIVLKDFEALLLEYCQAEQSEVRFSAVRWAVTLYNMKHCPSRYICMLGASDVKLDIREMALAGLNLLNDERQSSTMATDISYPDIAEMVNYIYSQQPQLLHCYEQRNGKLLFPTDTFLAMIKFLMKCFNTHDGSDFLQEDLSNSTLAKMCVLLEHAMSYDGSSELHTLALKSLVDISSRQPKMVSSFYVNRLDWPRTLLHADTHEEAPRLLGYGRQCQNTTDINEELGSCCNGRTNHSLEHEVCGGGNNSDNLGGDGCDEELVTGCHHRHGRIDHNLEFLIDRMMSWSVRDILKAPPVIKKERQTGKKLGTGVRRDGLWYLDRKETSEDVCLALMASTSKEEAKVLLLHCRLGHISFETMSKMFPAELSRVDKHKLVCDACEYGKHTRTSYVSRGLRSMLPFMLIHSDVWTSPMVSMSGMKYFVTF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.107550 | 0.232796 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0137300 | RBH | 2.207706 | 1.572778 | 3.196748 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g05310 | RBH | 0.049623 | 0.168745 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0148400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0003260 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0003490 | RBH | 0.0 | 0.639906 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0003500 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0003320 | RBH | 0.015980 | 0.051290 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0003520 | RBH | 0.000000 | 5.198259 | 1.463922 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0041700 | RBH | 0.247913 | 2.4001035 | 0.2581105 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0003500 | RBH | 0.0 | 0.000000 | 0.023854 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0030900 | SBH | 6.7019845 | 12.181814 | 18.9104575 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0003290 | RBH | 0.020250 | 0.076965 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0003500 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0003530 | RBH | 0.978947 | 10.244866 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0003470 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0003420 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G003330 | RBH | 0.0 | 0.152784 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0003560 | RBH | 0.0 | 0.0 | 0.679668 |
