Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0608700 | OGI:11067960 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:23511523-23513127 | ||||||||
| Gene Symbol | RLCK338, OsRLCK338 | ||||||||||
| DNA seq | TCATACCTGATCTCCAGGTGATGCTGGATCAATCGGCAGCTCAGAAGGTAAAAGCGATGGTGACGTTCTCTGAAACATAGCATCTAATTCATTCAGTCTGCTGACAACTTCCGCTATCGTAGGCCTTTTGTGTCGATCGGCTTCCACACATTGTAACGCCATTTCTAAACATGTCTTCACTTGTCGTTGAAGACTACCTATTTCCTCAGATGTATACGTCGGCGTTGTCTGCTGAAATCTTCTACTCCAGTTTTCATGGACCTAAGGAAATTGAAACATAATATAAGAAAGATAATTAATGGTATGGGCGCACAAAACTAATTGAGGACCTTCATCATATAGGCTAGATAGAAAATTTCTTACGAGCTCGATGAACTCTTGGGAAGGCATTTCAAGCAGTTTTGACCGTGCCTTAGGTCCTTCCATTATCTCTATTATTATCACACCTAGACTGAATACGTCAAACATCTCCGTGATATGTTTTTTCTCAATGTATTCCGGGGGCATGTAACCTCTGCATGATCGATATCATAATTAAGTTAGCATTTTTCTCATTTACATAAAGTGTGAATAGCTAACAAGATTCAACAATTAATTAGAAAATAAGTATATGCTCCCTCCTTTCTATAATATGAGGGATTTTAGATGGATTTGGCACATCCTAGTAAAATAAATCTTGTCCAGATTTATTTTACTAGGATATGTCAAATCCACACCTAAAATACTTTATATTATGGAACGGATAGAGTATGCGATTAAGTTGTCATGTTTGATCAACTTACGGAGTTCCTATAACCACTTTTGTTGTATGATGGGATAGTGTTTTCTCAAATAGCCTTGACAGCCCGAAATCTGCAATTTTCGGCACATTGTTCTTGTCCAACAATATGTTGCCAGGTTTTAAGTCGAGATGGAAAATATGACCTTGCGGTCCATTGTGAAGATAGTTTACACCCTCGCATGTCCCCTTAATTATGTTGTAACGTGTGCACCAATCAAATCCACTGGATTCGTCTGTACCATAAACAATAATTTATTTTCTTGAGACATCAATTTGGTTACCCTTTTTCTTGTTAACTGCAAAGTAATATAGTTAAAAACACAAAAACTTAGTTTTCAAAAAAAAACACAAAAACTATCATACCAGAAAGATAATTGTCAAGGCTTCCACGCTGCAAATATTCGAAGCAGAGAACTCTTTCCTCCATATAAGCCAAAACCAACTTGCCATTGTGTGGGACAAGCTTACGTCTTGTTTCACAGCAGTAGCCAACTAATCGAACAATATTTTTGTGTCGGACACTCATGAGGTTAGTAAATTCATTCATAAATTTCACATCATCAAGTGATATTATGTCGAGCTTCTTCACAGCAATCTCTTCCCCATTTTCTAGTACTCCCTGATAAAATTAATATCTCATTTTGATACGGGTCGATCAATTAAACTGTAGAAAATATAAATGTTAAGCATACCTTGTAAACTGTTCCAAACCCACCATGACCAATTTGGTGCTTCGTTGAAAAATTATCTGTAATTCTTGTTAACAAATCAATCGTAAGATCATTGGGCATCGTATCAGCTGTGTGCTGTAACTTGTCCGCCAT
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| CDS seq | ATGGCGGACAAGTTACAGCACACAGCTGATACGATGCCCAATGATCTTACGATTGATTTGTTAACAAGAATTACAGATAATTTTTCAACGAAGCACCAAATTGGTCATGGTGGGTTTGGAACAGTTTACAAGGGAGTACTAGAAAATGGGGAAGAGATTGCTGTGAAGAAGCTCGACATAATATCACTTGATGATGTGAAATTTATGAATGAATTTACTAACCTCATGAGTGTCCGACACAAAAATATTGTTCGATTAGTTGGCTACTGCTGTGAAACAAGACGTAAGCTTGTCCCACACAATGGCAAGTTGGTTTTGGCTTATATGGAGGAAAGAGTTCTCTGCTTCGAATATTTGCAGCGTGGAAGCCTTGACAATTATCTTTCTGACGAATCCAGTGGATTTGATTGGTGCACACGTTACAACATAATTAAGGGGACATGCGAGGGTGTAAACTATCTTCACAATGGACCGCAAGGTCATATTTTCCATCTCGACTTAAAACCTGGCAACATATTGTTGGACAAGAACAATGTGCCGAAAATTGCAGATTTCGGGCTGTCAAGGCTATTTGAGAAAACACTATCCCATCATACAACAAAAGTGGTTATAGGAACTCCAGGTTACATGCCCCCGGAATACATTGAGAAAAAACATATCACGGAGATGTTTGACGTATTCAGTCTAGGTGTGATAATAATAGAGATAATGGAAGGACCTAAGGCACGGTCAAAACTGCTTGAAATGCCTTCCCAAGAGTTCATCGAGCTCGTCCATGAAAACTGGAGTAGAAGATTTCAGCAGACAACGCCGACGTATACATCTGAGGAAATAGGTAGTCTTCAACGACAAGTGAAGACATGTTTAGAAATGGCGTTACAATGTGTGGAAGCCGATCGACACAAAAGGCCTACGATAGCGGAAGTTGTCAGCAGACTGAATGAATTAGATGCTATGTTTCAGAGAACGTCACCATCGCTTTTACCTTCTGAGCTGCCGATTGATCCAGCATCACCTGGAGATCAGGTATGA
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| Protein seq | MADKLQHTADTMPNDLTIDLLTRITDNFSTKHQIGHGGFGTVYKGVLENGEEIAVKKLDIISLDDVKFMNEFTNLMSVRHKNIVRLVGYCCETRRKLVPHNGKLVLAYMEERVLCFEYLQRGSLDNYLSDESSGFDWCTRYNIIKGTCEGVNYLHNGPQGHIFHLDLKPGNILLDKNNVPKIADFGLSRLFEKTLSHHTTKVVIGTPGYMPPEYIEKKHITEMFDVFSLGVIIIEIMEGPKARSKLLEMPSQEFIELVHENWSRRFQQTTPTYTSEEIGSLQRQVKTCLEMALQCVEADRHKRPTIAEVVSRLNELDAMFQRTSPSLLPSELPIDPASPGDQV |
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| Function | Cysteine-rich receptor-like protein kinase 41 [UniProtKB/Swiss-Prot:O23081] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0608700 | OsNip_11t0608700-00 | Chr11 | 23511523 | 23513127 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGGACAAGTTACAGCACACAGCTGATACGATGCCCAATGATCTTACGATTGATTTGTTAACAAGAATTACAGATAATTTTTCAACGAAGCACCAAATTGGTCATGGTGGGTTTGGAACAGTTTACAAGGGAGTACTAGAAAATGGGGAAGAGATTGCTGTGAAGAAGCTCGACATAATATCACTTGATGATGTGAAATTTATGAATGAATTTACTAACCTCATGAGTGTCCGACACAAAAATATTGTTCGATTAGTTGGCTACTGCTGTGAAACAAGACGTAAGCTTGTCCCACACAATGGCAAGTTGGTTTTGGCTTATATGGAGGAAAGAGTTCTCTGCTTCGAATATTTGCAGCGTGGAAGCCTTGACAATTATCTTTCTGACGAATCCAGTGGATTTGATTGGTGCACACGTTACAACATAATTAAGGGGACATGCGAGGGTGTAAACTATCTTCACAATGGACCGCAAGGTCATATTTTCCATCTCGACTTAAAACCTGGCAACATATTGTTGGACAAGAACAATGTGCCGAAAATTGCAGATTTCGGGCTGTCAAGGCTATTTGAGAAAACACTATCCCATCATACAACAAAAGTGGTTATAGGAACTCCAGGTTACATGCCCCCGGAATACATTGAGAAAAAACATATCACGGAGATGTTTGACGTATTCAGTCTAGGTGTGATAATAATAGAGATAATGGAAGGACCTAAGGCACGGTCAAAACTGCTTGAAATGCCTTCCCAAGAGTTCATCGAGCTCGTCCATGAAAACTGGAGTAGAAGATTTCAGCAGACAACGCCGACGTATACATCTGAGGAAATAGGTAGTCTTCAACGACAAGTGAAGACATGTTTAGAAATGGCGTTACAATGTGTGGAAGCCGATCGACACAAAAGGCCTACGATAGCGGAAGTTGTCAGCAGACTGAATGAATTAGATGCTATGTTTCAGAGAACGTCACCATCGCTTTTACCTTCTGAGCTGCCGATTGATCCAGCATCACCTGGAGATCAGGTATGA
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| Protein seq | MADKLQHTADTMPNDLTIDLLTRITDNFSTKHQIGHGGFGTVYKGVLENGEEIAVKKLDIISLDDVKFMNEFTNLMSVRHKNIVRLVGYCCETRRKLVPHNGKLVLAYMEERVLCFEYLQRGSLDNYLSDESSGFDWCTRYNIIKGTCEGVNYLHNGPQGHIFHLDLKPGNILLDKNNVPKIADFGLSRLFEKTLSHHTTKVVIGTPGYMPPEYIEKKHITEMFDVFSLGVIIIEIMEGPKARSKLLEMPSQEFIELVHENWSRRFQQTTPTYTSEEIGSLQRQVKTCLEMALQCVEADRHKRPTIAEVVSRLNELDAMFQRTSPSLLPSELPIDPASPGDQV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g39490 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0608700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0019870 | SBH | 0.0 | 4.723067 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0020040 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019790 | SBH | 0.0 | 6.253928 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0019410 | RBH | 0.0 | 0.019719 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019890 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0358000 | RBH | 0.0032925 | 1.037052 | 0.011698 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0020350 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0373300 | SBH | 0 | 0.017255 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0020190 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0020350 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0019810 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0019640 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0019750 | RBH | 0.0 | 0.506460 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019670 | SBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0020050 | SBH | 0.0 | 12.168943 | 0.0 |
