Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0284600 | OGI:11029410 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:10207196-10209116 | ||||||||
| Gene Symbol | OsEnS-142, ENS142 | ||||||||||
| DNA seq | TACATATCTATGCAAAGTCTCTGACCATGGGATACAAAGGATGGACCATAAAAACATTTCTTCTACTTCATTTGCTAATATTCAGTGTAGATCCGACAAAAGAAGAGGTTGACAACAATTTAATCATCAAGACGATTCAGGTATACATTGCATTTTAACAACGCACGATTACAGTATCTGTTCTGATCCAAAGCTGTTGTGTTGCTCGAATTTCAGACCGCAGATGGGCAAACCTTTGCCTGTGTTAGTTTCAAATCGCAACCATCCTTGAGGCATCCTTTGCTGATGAATCATACCACTCAGTTGGTAGGTTATTATTTTCTTATATTTCATATTAGTCATGCATGGTTTTCCCAAGAAACATCAATAACTTTTTATTAGATACATCTTGAATCTTACTCTTAATGCAGATGCCACCAATTTCCTTTCCTCACAGTACCGATGATGATGAAGGATCTAAATTTGGCATCTCTAATGTTGAGATGAGCGAAATTGAGTGTCCCCCAGGGACGGTGCCAATCCTAACAAGCTACAATGGATCCATGAGTACAAGATCATTCGATAAGATTATATACAGTGAGAACAGAAATGACAAAGGAAATAGACAAGTAAGAATTATAGTTCTGTAGTTGCATTATCTCCCATGTTTTCTTTCCTATGCTTAGAATTGTTTTTATTAATCGTACATTAATATTGACTCCCCTTCTCTGTTTTGTTCTAGATGGCTGCAGTTGTTATAGTGCCATCTACTTTTTACGGACTACAAACATCAATTTCAATATGGGAAACAGATCTTGGTACAGGACGTCCACCAAGGTTTAGTGGGGCAATTGTTGTTCTAAAAAATGGAGGAAGTCGTGTAGCTGTAGGATGGTCTGTAAGTTCTTAATAATCTCAAAGAATCTCATTTTGACAGTTAAATCTATTTACATCAGAAGAAGACTTTTTGTCATATCAGAAATGGTACATTTATTGAAACAATAAACTTGTACTAACCCTCAATAGTACATATGAAATGTTGAACATTTTGACATACTTTGCAGTCAAATACTAATGTAAAAACCTATGGTGCTTCGATCGCAGGTTGATCCACATCTGTACGGAGACAATCTTGTTCATTTCGAGATCGCGTGGGTAAGAATGTGTGCCAAAAATGCCATCTGTCAATTTGTATTAACCAAAGGAGGAAACATGAGAAATAACTGTTTCCTGCTTTACATGCAACAGGTTGATAATGATAAGTCATGTATCAACCTTCGTTGTGCGGGGTTTGTTCAGATGAGCAAAAAGGCAATCCCTGGAATAATAATCAGGCCAGTTTCCACTGTCAATGGAAAACAATACATCATTAGAGTTAAGATTATTAAGGTAAATAATCCTTTACTGTGCCAATAACCTTGCATTATTTAACTGGGACACTTTGTATATCTGATTTTTTTTCTCTGGAATGAATAGTTCATGGGAGACTGGGTGCTGAAAGTTGGAGAAGAAATAGTGGGGTACTGGCCATCAAAGCTCTTGACTCACATGTCTGAAGCTGCAGACGTGATCAGTTGGATGGGTGTAGTAGAAGCTGCTCCAGGGGAACCTTTTCCTCCCATGGGCAGTGGCCAGCCTGCTGATGAAGGAGAGACAAAGGCCGCTTTCTTCGCCGATGCGAAGGTGATCGACGCGTCGGGAAGCTTTGCAACTCCTGCTCTCAAAACAATCAACACGGTTGCAACTGAGCCAAACTGCTACGATGTTGGGCGTCCTTACACCACGGACGATGGCTTGCAGTTCTACTATGGTGGAGCGGGATGCTCACCGAGTCAGCCCATCAAGTGATTGTTCGAAGCATTTGATCTGTATTTGCTTCGGCGACTATACTGCTACTGTAAACATCGAATAATCTTAGCATGTTTTTGTTGAGATTATGGGC
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| CDS seq | ATGGGATACAAAGGATGGACCATAAAAACATTTCTTCTACTTCATTTGCTAATATTCAGTGTAGATCCGACAAAAGAAGAGGTTGACAACAATTTAATCATCAAGACGATTCAGATGCCACCAATTTCCTTTCCTCACAGTACCGATGATGATGAAGGATCTAAATTTGGCATCTCTAATGTTGAGATGAGCGAAATTGAGTGTCCCCCAGGGACGGTGCCAATCCTAACAAGCTACAATGGATCCATGAGTACAAGATCATTCGATAAGATTATATACAGTGAGAACAGAAATGACAAAGGAAATAGACAAATGGCTGCAGTTGTTATAGTGCCATCTACTTTTTACGGACTACAAACATCAATTTCAATATGGGAAACAGATCTTGGTACAGGACGTCCACCAAGGTTTAGTGGGGCAATTGTTGTTCTAAAAAATGGAGGAAGTCGTGTAGCTGTAGGATGGTCTGTTGATCCACATCTGTACGGAGACAATCTTGTTCATTTCGAGATCGCGTGGGTTGATAATGATAAGTCATGTATCAACCTTCGTTGTGCGGGGTTTGTTCAGATGAGCAAAAAGGCAATCCCTGGAATAATAATCAGGCCAGTTTCCACTGTCAATGGAAAACAATACATCATTAGAGTTAAGATTATTAAGTTCATGGGAGACTGGGTGCTGAAAGTTGGAGAAGAAATAGTGGGGTACTGGCCATCAAAGCTCTTGACTCACATGTCTGAAGCTGCAGACGTGATCAGTTGGATGGGTGTAGTAGAAGCTGCTCCAGGGGAACCTTTTCCTCCCATGGGCAGTGGCCAGCCTGCTGATGAAGGAGAGACAAAGGCCGCTTTCTTCGCCGATGCGAAGGTGATCGACGCGTCGGGAAGCTTTGCAACTCCTGCTCTCAAAACAATCAACACGGTTGCAACTGAGCCAAACTGCTACGATGTTGGGCGTCCTTACACCACGGACGATGGCTTGCAGTTCTACTATGGTGGAGCGGGATGCTCACCGAGTCAGCCCATCAAGTGA
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| Protein seq | MGYKGWTIKTFLLLHLLIFSVDPTKEEVDNNLIIKTIQMPPISFPHSTDDDEGSKFGISNVEMSEIECPPGTVPILTSYNGSMSTRSFDKIIYSENRNDKGNRQMAAVVIVPSTFYGLQTSISIWETDLGTGRPPRFSGAIVVLKNGGSRVAVGWSVDPHLYGDNLVHFEIAWVDNDKSCINLRCAGFVQMSKKAIPGIIIRPVSTVNGKQYIIRVKIIKFMGDWVLKVGEEIVGYWPSKLLTHMSEAADVISWMGVVEAAPGEPFPPMGSGQPADEGETKAAFFADAKVIDASGSFATPALKTINTVATEPNCYDVGRPYTTDDGLQFYYGGAGCSPSQPIK |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0284600 | OsNip_11t0284600-00 | Chr11 | 10207222 | 10209022 | + | RAP2018-11-26 | ||
| CDS seq | ATGGGATACAAAGGATGGACCATAAAAACATTTCTTCTACTTCATTTGCTAATATTCAGTGTAGATCCGACAAAAGAAGAGGTTGACAACAATTTAATCATCAAGACGATTCAGATGCCACCAATTTCCTTTCCTCACAGTACCGATGATGATGAAGGATCTAAATTTGGCATCTCTAATGTTGAGATGAGCGAAATTGAGTGTCCCCCAGGGACGGTGCCAATCCTAACAAGCTACAATGGATCCATGAGTACAAGATCATTCGATAAGATTATATACAGTGAGAACAGAAATGACAAAGGAAATAGACAAATGGCTGCAGTTGTTATAGTGCCATCTACTTTTTACGGACTACAAACATCAATTTCAATATGGGAAACAGATCTTGGTACAGGACGTCCACCAAGGTTTAGTGGGGCAATTGTTGTTCTAAAAAATGGAGGAAGTCGTGTAGCTGTAGGATGGTCTGTTGATCCACATCTGTACGGAGACAATCTTGTTCATTTCGAGATCGCGTGGGTTGATAATGATAAGTCATGTATCAACCTTCGTTGTGCGGGGTTTGTTCAGATGAGCAAAAAGGCAATCCCTGGAATAATAATCAGGCCAGTTTCCACTGTCAATGGAAAACAATACATCATTAGAGTTAAGATTATTAAGTTCATGGGAGACTGGGTGCTGAAAGTTGGAGAAGAAATAGTGGGGTACTGGCCATCAAAGCTCTTGACTCACATGTCTGAAGCTGCAGACGTGATCAGTTGGATGGGTGTAGTAGAAGCTGCTCCAGGGGAACCTTTTCCTCCCATGGGCAGTGGCCAGCCTGCTGATGAAGGAGAGACAAAGGCCGCTTTCTTCGCCGATGCGAAGGTGATCGACGCGTCGGGAAGCTTTGCAACTCCTGCTCTCAAAACAATCAACACGGTTGCAACTGAGCCAAACTGCTACGATGTTGGGCGTCCTTACACCACGGACGATGGCTTGCAGTTCTACTATGGTGGAGCGGGATGCTCACCGAGTCAGCCCATCAAGTGA
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| Protein seq | MGYKGWTIKTFLLLHLLIFSVDPTKEEVDNNLIIKTIQMPPISFPHSTDDDEGSKFGISNVEMSEIECPPGTVPILTSYNGSMSTRSFDKIIYSENRNDKGNRQMAAVVIVPSTFYGLQTSISIWETDLGTGRPPRFSGAIVVLKNGGSRVAVGWSVDPHLYGDNLVHFEIAWVDNDKSCINLRCAGFVQMSKKAIPGIIIRPVSTVNGKQYIIRVKIIKFMGDWVLKVGEEIVGYWPSKLLTHMSEAADVISWMGVVEAAPGEPFPPMGSGQPADEGETKAAFFADAKVIDASGSFATPALKTINTVATEPNCYDVGRPYTTDDGLQFYYGGAGCSPSQPIK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0284600 | OsNip_11t0284600-01 | Chr11 | 10207196 | 10209116 | + | IsoSeq | ||
| CDS seq | ATGTTGGGCGTCCTTACACCACGGACGATGGCTTGCAGTTCTACTATGGTGGAGCGGGATGCTCACCGAGTCAGCCCATCAAGTGATTGTTCGAAGCATTTGATCTGTATTTGCTTCGGCGACTATACTGCTACTGTAAACATC |
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| Protein seq | MLGVLTPRTMACSSTMVERDAHRVSPSSDCSKHLICICFGDYTATVNI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr11 | 10207335 | 10207606 | + | OsNip_11t0284600-01 | OsNip_11t0284600-01,OsNip_11t0284600-00 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.960896 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g18140 | RBH | 0.0 | 0.0 | 0.227734 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0284600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0010600 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0010530 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0010520 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0010320 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0010590 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0155900 | RBH | 0 | 0 | 0.056012 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0010510 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0156800 | RBH | 0.0188085 | 0 | 0.1194635 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0010590 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0010780 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0010390 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0010170 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0010460 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G010550 | RBH | 0.0 | 0.0 | 0.525693 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0010330 | RBH | 0.0 | 0.0 | 0.0 |
