Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_10g0532000 | OGI:10063320 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr10:20671799-20678242 | ||||||||
| Gene Symbol | NAC18, ONAC018, ONAC18, OsSWN4 | ||||||||||
| DNA seq | AATTTGCTTCTCATCTTTCTTCTCTACTCCTCTCAAATACAAGAGCTCACACTGCTCCCTAGCTTCCTTCTTCATCCCTTGAACTAGTTGTCAGCTACTGACCAGCCTGAAGATAGATGCTAGTTTGTGTAGAGAATTCGATCTTCTGAGGTGAGTTGCAGTGATCACAAGTTTGCGGTTTCATCGATCAATTGATTTGGTGAATGAGTTGCGAGTTGGATCCACATTTTCATGTTCTCTGTTCTTACTTTTTTTTTTAAAGAGGCTGTATGCCGTTTCTGTCTTTGATCTGTTCGGTTATCCGTTTTCATCTCTCAAAGCTATCCTTCTTTCTTGGTTTGGTAGCGATTGATGTGTCCACTCTATTTCCATCAGATCTTTGTCATGTCTTTAGAATTTGAGTGACTGATGTGAGGGAGCACAATCTCCATGCTACGATCTAACTTAGCTTGTAGTTTTTTCAACCGTTTTTTAATCTCTTCCAATTAATTACTGGTTGGATACATATGTGATGAGAACTTACTACCGGATTTTTCTTGATGTTCATGTGCTGATACATCTCAACAAATAGGTTATAATATTGACAGGAATCGACGGGATATCTTCCCAGTTCCAACGTTTGATGTACTACTCTATTAGGCCATGCTCGGTTTGAAAGAGATTAAAGAGTATTGAGCTATTGGGCCATGTTCGGTTTGAAAGAGATTGAAGAGTATCGAGGGGGAATAATTTCACACCACAACAGGTGTGAAATAAATTCCCTCCAATCCCTAACGGAACATGTTCTTACTGCAACAAGCAGTAATATGTTAACAAGAGGAAAACTGGAAAATTATCTTTAGACTTTGTTGATATAAACACCTTTTTATAAGTCAAATTTGACATTGGATCAAAGAGGAAAGTAGAATTAGTCGCTATATATTGGATATATAGACTTAATTGATTCTATCTATTCCTATGATAAATACATGGTCCAAACCCAGAAATGATTTCATCTAGAATTTAAATCAGTCCAAAGGACAAAGGTTGTATCACAAGAAGATGAAAATGTAGAGCACCCCATTTTTTGTGCAATATATTTTCATAGAAAATACCAGACTCCCCCCCCTCCCCACGGGAAAAAAATGTGGATATAGACCTAAAATGTTGATATTGATGATTTTTTTTTCTTGAAAAGAACTGATATTGATGATTGATTCTGGTATTTCGAACTAGATTAGTTTTGTTTGTATTCCTACATATTATGTATCTTCATATTGATTGTGTCACTCTCAGCAGAATGTTTGTTTACCAGAGCAGAATCTACTACAAAATGGTTTGAACCATTTTAATTTCCTAAAAAAAATTATGCCACATTAAATCAAGATAGAACAAAAAAAATACAGAAATATGTTTATATAACCATATGTAGCTTTTTGTTGAAGTAGGGAGCTGATATAATCGTTATACTCCAGAGAAGTAATTCTCATGGGTCTTGAGTGGAGTGCAACTGTGTATAGTAGATCGAAAATCCAAACTTTTCTTATTTTCCTATAGCAATGGAAATGAAGTACTCCCTCCGGGCTGATAATACTTGTCGTTTTAGACAAAAGTGAGATCAAACTTTAAAATATTTGATTATGAATCATTTTAAAAATATTTGTCTTTCAAATATGGTAACTATATGTATATATTAGTCTTAAAAAGTACTTTAATAAAATCATATATTTGTTAATACTTATATATATTATAATAGAAAATAATGGTCAAAGTTGTTATTTGAATATCGTGTTCTTATCCAAAACGACAAGTATTATCAACCCGGAGGGAGTAGGAGTAAGGAACGAGAGTACCCCTTTTCCATTATTATTTTCCTAAACTTTTGAAAGCGGAATTTATAATGCATACAGTAACACGTTAAAACATTAACCATCATTAAAAAAAAACTTTAACCATCAATCTCAATTTAAATAATTTGATTCAACTTTTGAATGTGATATCATTATGTTATTTTTCAAAAATAGTTTCAAAATACTCACTTCGTTTTTTAATATATGAAGCCATTGACTTTTGACACAATGTTTAACTATTTATTTTGTTAAAAAATATAAATGTCATTTATTTTGTTGTAATTTGTTTTATCATTAAAGAAACTATAATCTTAAGTTATACCTTTACATATTTACACTAATTTTTTAATAAAATGAATGTATTATTAAAATTTTATATAAAAATAGGTGGTAGTATTATACCCTTGGCATATAATTTTTAAAATTTTATACTAGTAAATAATACTCCCTCCATCTATTTTTGATAGTCATATTTCCAAATATGAAAATTTTATTTTTGATAGGCATATTTCAATCCAACAACCTATCATCATAATGACTTTCTCGGATTTAATGCATGACTCTCCATTCTTTCACACTAGATTGGCTACATGGGCATTGAAAATGTAAATATTAATGAATCGCATGTTTACGAGAAATGACTAGTAACATGTTTAAATGGATGATAAGTAGAATTACTTATCTTTGGTCTGTGTGCTAAGATAAAATATGACTATCAAAAGTAGATGGAGGGAGTAATCAATAGTGTCTTAGTGACTGCACTCTCTATTCCAGAAAAAAACCAACTTCTGGCTAGATATCATCTGAGGTTGCTTTTTTCTAGAAACAAATCGAGGGAGTGTAATATAAATGTCGAAAATGTCACTTGTTTGTGGCTAGAGGGATTATATAACTTAGGGGATTAGTCAGGCATGCAACAAGTTAGTTATGCATCCCCATAAAGGGCACAGGACCAGAGATGTGCCATGGAATTCCTAGACAAAGGGACAGAATGGTCAGAGGCCGTGCAAAGAACCAATGGTTGTGCAATGCCCTAGCTGCTTGCTGCTTTATAGAGCTAGCCCCTCAGTCCCCGGTGCAGGCAGCAGGCCTGATCGATCACAAAAGGGGCTCTCCCATCTCCTACTGATCTCCATTTCTATTCCTACATGTCTACTGCTACAACAAATGCATGCTGATCTCTGCATGGCGTATTGCCAATGTCATTGGCATATATTGCCTTCTCTCAGTGTATTCTAAAAAGGATTTCTGTTTTGTTGTGACGATACATTGGCATATCATATTACTGAATCTCTGAATCCCTGCCTTCTCTGTGTATTGCTAACCACTAAAGAGTACTCCAGTTTGCAATGCATCCATGAATCTCTGTCAAATTCTTCGTGCTAAAGTGCATGACTGTCTGTAGTAGAAGACTCAACTAGCTAACATATACACTTTGTTGAGGAAAAAAGCAAGCTCAAGTTATGACAGATCCTATATTCAGAAACAACATGTCTGCATCCATCCATATAGTATGTGTTACACTGGTCCATGTCTCTGTAGCAGCTATGATTCACTGCTGACTATATAGCCAATATGCTCCTGATCACAGAGTCGACACTATCATTCACAGCCTGCAACTTTGCTGCATCCAGGCCCGCCCTGGAGCTCAGGCTTTGCCGTACTTTGCCAGTAGTAAAATTGTTCAGACTTCACCATACACTATTCTACTACTACCTCCGTCCCATATTACTTGTCTTTTTGAGTTTTTGTTTATCAATGTTTGATCATTCGTCTTATTCAAAAAATTTTGGAATTATTATTTATTTTGTTTATCATTTGCTTTATTATCAAAAGTACTTTACATATGACTTATCTTTTTTTATATTTGCACTAATTTTTCAAATAAAATGAATGGTCAAACGTTGCAAATAAAAAGTCAAAAACGTCACCTATTATGGGACGGAGGGAGTAGTAACTGTCCTAGAAACCAGAAAGCAAGAACTAAACCCCAGCATGGCGCCTGCGTTAAACTTTTCTGAAAGCACTGAAACCCATGCACGCGCTTAGGCAAGTTCATGGATGGTGGTTTAGTTCACATCCAACCAGTAGTCAAGTATGCAGTACTGCACTACTGTCTCCTCCTGCAAACTGCAACTGATGAGAACTAGCTAGCTAGCTTTGCTATATAGAAAAATGCAGCTTCGAATGATTCTACCACTCGATCGCTAGCTGTGTGCATGTCTGCTTGGAGATATAAAGATTGAGTTGTTTGCTGAATTTTATGCATGCAGGCGTATGGTGATCATGGAGTCATGTGTGCCTCCTGGGTTTAGGTTCCACCCCACCGACGAGGAGCTCGTCGGCTACTACCTCCGGAAGAAGGTGGCCTCGCAGAAGATCGACCTCGACGTCATCCGCGACGTCGACCTCTACCGCATCGAGCCATGGGATCTCCAAGGTTTAATTAATCTTCATACATATATACTTAATTTCATGCATGCATAGCTAGATCAATCGAGCTAGCTATATATAGATCGATGCTGATCATGCATGGATTGGGGTGGGTGAGAAGAGCATTGCAGGATAGGGTACGAGGAGCAGAGCGAGTGGTACTTCTTCAGCTACAAGGACAGGAAGTACCCGACGGGGACGAGGACGAACAGGGCGACGATGACGGGGTTCTGGAAGGCGACGGGGAGGGACAAGGCGGTGCGTGAGAGGAGCAGGCTCATCGGGATGAGGAAGACGCTCGTCTTCTACAAGGGCAGGGCACCCAACGGCCACAAGACCGACTGGATCGTCCACGAGTACCGCCTCGAGTCCGACGAGAACGCCCCGCCTCAGGCAAGATCTCCATTTATCTCTCTCTCAATCAACAAGATCGATCTACAGTTTCTAGAAAAGATTAATTAGCTAGATCTTGGTTTCTTACGGCATCCAGTAGATTCAGTGATTCACATGCAGCAGTTTGCCGCGTAATAAAAAAAATGCACGCTAGCATGAGTATATGGTACAGTAGAACAGTAATGCATGAACTGATCGATGAGCATTGGAAATCGTTGTGAATCTTATTGCCTTGAGGCGTGCGTAGTTTTGGCTTCTAACCTGAAGGCCGAATTCATCATGGACGCGCGCGCTCCTCCGATCCGCATGCTGCTGATGATGAGTTCAGCGGCGAACCAGTGATGGATAGCCACGTCGGCGGGAGGACTGGACTTTGGCGGAGTGTAGCGGCGGCGGCGGCGGCGGCGGGAGGACGGATTGATCGGAAGTTACAGAGACGACGGCGCCTCGTGGATTGGGCTTACTAGGCCGAATTTGCTTTTTTGTTTGGCCCGGCTTATTTCTAAGAATAGCCCAATAGCAGCCTTGAAGGCCCAATTGGTTTAGCAAACTCTTACTCTCTCTTCTCTTGACACGTTTAGCAAACCGCCCGTCAAAACTAACGCAAGATTCGTGACAACAAAACCACTTCGAAAAACGGGAGTTTTTTTTCCCGGATTTCTACTGATATCCAACTGTTTAATGTATAAGGGCATGTTTGATAGAACTTCAACTTCTAAATTTAGCTCTAGGAGTTGGGTTTGGAGTGGAATTGTGGAGCTGGCTAAACCCAGCTCCACCTCTATAGATCATTTTGTGAGAGAGCTCCACCCAGCTTCGCTTCTATTTTTGTTGGAGCTGAAACTATTTGCCTGAGCTCCAACTCCAGAAGAGATAGAGCTGGAGCTGGAGATGTGCCAAACAGGCCCTAAATTTAAATGTTTTTCAAACATGGGGTCGAATGTTTTTCAAACATGGGGTCGATTTTGTTTCACAAGTACTCCTTACTATTGATCATCGAGTCATTCACCATGAATGGTGCGTGCATTGCAGGAAGAAGGCTGGGTGGTGTGCCGCGCGTTCAAGAAGCGAACCATGCAGCCGCCGCGGAGCTCCATCGGAGCATGGGAGGCGAGCTACTCCTACCACGACCCCGCCGTCTTCGTCGGCGGCGGGGAACACTTCAAGCAAGAGGCCGCGGCCGAGCTGGACGGCGTCGCCGCCGCCGCCGGAGCTAACGCCTTCCTGCGGTACTCCACCCGCCTGGCCGAGCTCCCGCAGCTGGAGAGCCCGCCGCTGCCAAGCCAGGGGAGCCAGGCGGCCTCGGCCGTCGTCGACGGCGAGGAAGATAACGCCGATTCTAGCAGGCGCCCTGGCGGCGGCGGCGGCGCCGCCGCCGCGGTGACCACGGACTGGAGGGCGTTCGACAAGTTCGTCGCGTCCCAGCTCAGCCCCGAGGAGCAGCACACCTGCCGGGCCACCGACGACGACGACATGGCAGCGCTGCTGCTCCTCGACGGCGGCGGGCAGGAGGACGACGCCGGGAGGTGGCTGGGCTCCGCCGGGTTGCTGAGCGCCGTGGCGGCCGACGCGACGACGGACTGCGGCCTCGGCACCAGCTGCGTGCCTGGCGACATCAACTGATTCAGGGCCAAGCCGATCGAGCTCTCACTTCTCCTTAGCATAAAGTGTGAGATATCTACGAATTGTATGGATGGCTATATATACGTACGCCTATACATATGTAGCTGGTCAAAGCATCGTTTCAGTTTCAGTTTCAGTTCTTGGAAGTCAATGGATGTTGACCATT
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| CDS seq | ATGGTGATCATGGAGTCATGTGTGCCTCCTGGGTTTAGGTTCCACCCCACCGACGAGGAGCTCGTCGGCTACTACCTCCGGAAGAAGGTGGCCTCGCAGAAGATCGACCTCGACGTCATCCGCGACGTCGACCTCTACCGCATCGAGCCATGGGATCTCCAAGAGCATTGCAGGATAGGGTACGAGGAGCAGAGCGAGTGGTACTTCTTCAGCTACAAGGACAGGAAGTACCCGACGGGGACGAGGACGAACAGGGCGACGATGACGGGGTTCTGGAAGGCGACGGGGAGGGACAAGGCGGTGCGTGAGAGGAGCAGGCTCATCGGGATGAGGAAGACGCTCGTCTTCTACAAGGGCAGGGCACCCAACGGCCACAAGACCGACTGGATCGTCCACGAGTACCGCCTCGAGTCCGACGAGAACGCCCCGCCTCAGGAAGAAGGCTGGGTGGTGTGCCGCGCGTTCAAGAAGCGAACCATGCAGCCGCCGCGGAGCTCCATCGGAGCATGGGAGGCGAGCTACTCCTACCACGACCCCGCCGTCTTCGTCGGCGGCGGGGAACACTTCAAGCAAGAGGCCGCGGCCGAGCTGGACGGCGTCGCCGCCGCCGCCGGAGCTAACGCCTTCCTGCGGTACTCCACCCGCCTGGCCGAGCTCCCGCAGCTGGAGAGCCCGCCGCTGCCAAGCCAGGGGAGCCAGGCGGCCTCGGCCGTCGTCGACGGCGAGGAAGATAACGCCGATTCTAGCAGGCGCCCTGGCGGCGGCGGCGGCGCCGCCGCCGCGGTGACCACGGACTGGAGGGCGTTCGACAAGTTCGTCGCGTCCCAGCTCAGCCCCGAGGAGCAGCACACCTGCCGGGCCACCGACGACGACGACATGGCAGCGCTGCTGCTCCTCGACGGCGGCGGGCAGGAGGACGACGCCGGGAGGTGGCTGGGCTCCGCCGGGTTGCTGAGCGCCGTGGCGGCCGACGCGACGACGGACTGCGGCCTCGGCACCAGCTGCGTGCCTGGCGACATCAACTGA
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| Protein seq | MVIMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDVDLYRIEPWDLQEHCRIGYEEQSEWYFFSYKDRKYPTGTRTNRATMTGFWKATGRDKAVRERSRLIGMRKTLVFYKGRAPNGHKTDWIVHEYRLESDENAPPQEEGWVVCRAFKKRTMQPPRSSIGAWEASYSYHDPAVFVGGGEHFKQEAAAELDGVAAAAGANAFLRYSTRLAELPQLESPPLPSQGSQAASAVVDGEEDNADSSRRPGGGGGAAAAVTTDWRAFDKFVASQLSPEEQHTCRATDDDDMAALLLLDGGGQEDDAGRWLGSAGLLSAVAADATTDCGLGTSCVPGDIN |
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| Function | NAC domain-containing protein 76 [UniProtKB/Swiss-Prot:O65508] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_10g0532000 | OsNip_10t0532000-01 | Chr10 | 20671799 | 20678242 | + | RAP2018-11-26 | ||
| CDS seq | ATGGTGATCATGGAGTCATGTGTGCCTCCTGGGTTTAGGTTCCACCCCACCGACGAGGAGCTCGTCGGCTACTACCTCCGGAAGAAGGTGGCCTCGCAGAAGATCGACCTCGACGTCATCCGCGACGTCGACCTCTACCGCATCGAGCCATGGGATCTCCAAGAGCATTGCAGGATAGGGTACGAGGAGCAGAGCGAGTGGTACTTCTTCAGCTACAAGGACAGGAAGTACCCGACGGGGACGAGGACGAACAGGGCGACGATGACGGGGTTCTGGAAGGCGACGGGGAGGGACAAGGCGGTGCGTGAGAGGAGCAGGCTCATCGGGATGAGGAAGACGCTCGTCTTCTACAAGGGCAGGGCACCCAACGGCCACAAGACCGACTGGATCGTCCACGAGTACCGCCTCGAGTCCGACGAGAACGCCCCGCCTCAGGAAGAAGGCTGGGTGGTGTGCCGCGCGTTCAAGAAGCGAACCATGCAGCCGCCGCGGAGCTCCATCGGAGCATGGGAGGCGAGCTACTCCTACCACGACCCCGCCGTCTTCGTCGGCGGCGGGGAACACTTCAAGCAAGAGGCCGCGGCCGAGCTGGACGGCGTCGCCGCCGCCGCCGGAGCTAACGCCTTCCTGCGGTACTCCACCCGCCTGGCCGAGCTCCCGCAGCTGGAGAGCCCGCCGCTGCCAAGCCAGGGGAGCCAGGCGGCCTCGGCCGTCGTCGACGGCGAGGAAGATAACGCCGATTCTAGCAGGCGCCCTGGCGGCGGCGGCGGCGCCGCCGCCGCGGTGACCACGGACTGGAGGGCGTTCGACAAGTTCGTCGCGTCCCAGCTCAGCCCCGAGGAGCAGCACACCTGCCGGGCCACCGACGACGACGACATGGCAGCGCTGCTGCTCCTCGACGGCGGCGGGCAGGAGGACGACGCCGGGAGGTGGCTGGGCTCCGCCGGGTTGCTGAGCGCCGTGGCGGCCGACGCGACGACGGACTGCGGCCTCGGCACCAGCTGCGTGCCTGGCGACATCAACTGA
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| Protein seq | MVIMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDVDLYRIEPWDLQEHCRIGYEEQSEWYFFSYKDRKYPTGTRTNRATMTGFWKATGRDKAVRERSRLIGMRKTLVFYKGRAPNGHKTDWIVHEYRLESDENAPPQEEGWVVCRAFKKRTMQPPRSSIGAWEASYSYHDPAVFVGGGEHFKQEAAAELDGVAAAAGANAFLRYSTRLAELPQLESPPLPSQGSQAASAVVDGEEDNADSSRRPGGGGGAAAAVTTDWRAFDKFVASQLSPEEQHTCRATDDDDMAALLLLDGGGQEDDAGRWLGSAGLLSAVAADATTDCGLGTSCVPGDIN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0119966 | RBH | 0.0 | 0.0 | 0.916616 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38834 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0532000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0018040 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017810 | RBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018370 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0018120 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0341300 | RBH | 0.010418 | 0.8894555 | 0.1329065 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0018020 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0366000 | RBH | 0.217087 | 0.496272 | 1.4759925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017780 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017610 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018250 | RBH | 0.0 | 4.351645 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017820 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018340 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G018010 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018130 | RBH | 0.0 | 0.000000 | 0.0 |
