Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_10g0513900 | OGI:10060980 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr10:19810238-19812025 | ||||||||
| Gene Symbol | CYP450 | ||||||||||
| DNA seq | AGAGCAAAGGCAAGAAGACGCCATGGCCACGGACACCTCATGGCTCCTGCTCCTCGTCGCTCTCGTCCTCCCGCTCGTCGTCCTCCTCGCGCGGCGGCGCCGGAGCGGCGGTGGCAGCCGCCGCATCCCGCCTGGCCCGCTCGCCGTGCCGGTGCTCGGAAGCCTCCTGTGGCTGAGGCACTCCTCGGCGAACTTGGAGCCGCTCCTCCAGCGCCTGATCGCGCGGTACGGCCCCGTCGTGTCGCTGCGCGTGGGCTCCCGCCTCTCCATCTTCGTCGCCGACCGCCGCGTCGCGCACGCGGCCCTGGTGGAGCGCGGCGCCGCGCTCGCCGACCGCCCGGACGTCACGCGCTCGCTGCTCGGCGAGACCGGCAACACCATCACGCGCTCCAGCTACGGCCCCGTGTGGCGTGTCCTCCGCCGCAACCTCGTCGCCGAGACGCTGCACCCGTCGCGCGTCCGCCTGTTCGCGCCCGCGCGCTCCTGGGTTCGCCGAGTGCTCGTCGACAAGCTCGCGGACGGCGCGCGCCCCGAGTCCGAGCCGCCACGCCCGCGCGTGGTGGTGGAGACGTTCCGGTACGCCATGTTCTGCCTCCTCGTGCTCATGTGCTTCGGCGAGCGGCTCGACGAGGCCGCGGTGCGCGCCATCGGCGCCGCGCAGCGCGACTGGCTCCTGTACGTCGCGAGGAAGACGAGCGTATTCGCGTTCTACCCGGCGGTCACCAAGCACATCTTCCGCCGCCGCCTCCAAATAGGCCTCGCCCTGCGACGGCAGCAGAAGGAGCTCTTTGTGCCACTCATCGATGCCCGGCGAGCGCGCAAGAACCATATCCAGCAAGCCGGCGGCCCACCGGTGCCGGAGAAGGAGACGACGTTCGAGCACTCGTACGTCGACACGCTGCTCGACGTAAGCCTCCCCGACACCGACGGCGACAGCGCCCTCACCGAGGACGAGCTGGTGATGCTCTGCTCCGAGTTCCTCAATGCCGGCACCGACACGACGGCCACCGCGCTGCAGTGGATCATGGCCGAGCTGGTCAAGAACCCATCCATCCAATCCAAGCTCCACGACGAGATCAAGTCCAAGACCAGCGACGACGAGATCACCGAGGAGGACACCCACGACATGCCGTACCTGAAGGCCGTCATCCTCGAGGGCCTCCGCAAGCACCCGCCGGCCCACTTCGTGCTGCCGCACAAGGCGGCGGAGGACGTCGAGGTCGGCGGGTACCTCATCCCCAAGGGCGCGACGGTGAACTTCATGGTGGCCGAGATGGGAAGGGACGAGAGGGAGTGGGAGAAGCCGATGGAGTTCATCCCTGAGCGGTTCCTCGCCGGCGGCGACGGCGAGGGAGTGGACGTGACGGGCAGCCGGGAGGTCCGGATGATGCCGTTCGGCGTCGGGAGGAGGATCTGTGCCGGGCTCGGCGTTGCCATGCTACACCTGGAGTATTTCGTGGCGAATTTGGTGAAGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGACTTGACCGAGAAGAATGAGTTCACCACTGTGATGGCAAAGCCGCTCCGTGCTCAGCTTGTTAAACGGGCTTAGTTTTTTTTTTTTGAGTGTCTGTAAGACGGAACTGGATCCTCTGACGTGAACTGCTCCGTGACATGGTCACTAACAAGTGGGTCCGCGAGTGGTGGGGTTCACATGTCAGTCACCACGTCTCTCTGACTTCACGTCAGAGGATCCCAATCCCTAAGACATGCATGCGCATCTTTCTACCATATGATTAATACCATAGATTCATG
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| CDS seq | ATGGCCACGGACACCTCATGGCTCCTGCTCCTCGTCGCTCTCGTCCTCCCGCTCGTCGTCCTCCTCGCGCGGCGGCGCCGGAGCGGCGGTGGCAGCCGCCGCATCCCGCCTGGCCCGCTCGCCGTGCCGGTGCTCGGAAGCCTCCTGTGGCTGAGGCACTCCTCGGCGAACTTGGAGCCGCTCCTCCAGCGCCTGATCGCGCGGTACGGCCCCGTCGTGTCGCTGCGCGTGGGCTCCCGCCTCTCCATCTTCGTCGCCGACCGCCGCGTCGCGCACGCGGCCCTGGTGGAGCGCGGCGCCGCGCTCGCCGACCGCCCGGACGTCACGCGCTCGCTGCTCGGCGAGACCGGCAACACCATCACGCGCTCCAGCTACGGCCCCGTGTGGCGTGTCCTCCGCCGCAACCTCGTCGCCGAGACGCTGCACCCGTCGCGCGTCCGCCTGTTCGCGCCCGCGCGCTCCTGGGTTCGCCGAGTGCTCGTCGACAAGCTCGCGGACGGCGCGCGCCCCGAGTCCGAGCCGCCACGCCCGCGCGTGGTGGTGGAGACGTTCCGGTACGCCATGTTCTGCCTCCTCGTGCTCATGTGCTTCGGCGAGCGGCTCGACGAGGCCGCGGTGCGCGCCATCGGCGCCGCGCAGCGCGACTGGCTCCTGTACGTCGCGAGGAAGACGAGCGTATTCGCGTTCTACCCGGCGGTCACCAAGCACATCTTCCGCCGCCGCCTCCAAATAGGCCTCGCCCTGCGACGGCAGCAGAAGGAGCTCTTTGTGCCACTCATCGATGCCCGGCGAGCGCGCAAGAACCATATCCAGCAAGCCGGCGGCCCACCGGTGCCGGAGAAGGAGACGACGTTCGAGCACTCGTACGTCGACACGCTGCTCGACGTAAGCCTCCCCGACACCGACGGCGACAGCGCCCTCACCGAGGACGAGCTGGTGATGCTCTGCTCCGAGTTCCTCAATGCCGGCACCGACACGACGGCCACCGCGCTGCAGTGGATCATGGCCGAGCTGGTCAAGAACCCATCCATCCAATCCAAGCTCCACGACGAGATCAAGTCCAAGACCAGCGACGACGAGATCACCGAGGAGGACACCCACGACATGCCGTACCTGAAGGCCGTCATCCTCGAGGGCCTCCGCAAGCACCCGCCGGCCCACTTCGTGCTGCCGCACAAGGCGGCGGAGGACGTCGAGGTCGGCGGGTACCTCATCCCCAAGGGCGCGACGGTGAACTTCATGGTGGCCGAGATGGGAAGGGACGAGAGGGAGTGGGAGAAGCCGATGGAGTTCATCCCTGAGCGGTTCCTCGCCGGCGGCGACGGCGAGGGAGTGGACGTGACGGGCAGCCGGGAGGTCCGGATGATGCCGTTCGGCGTCGGGAGGAGGATCTGTGCCGGGCTCGGCGTTGCCATGCTACACCTGGAGTATTTCGTGGCGAATTTGGTGAAGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGACTTGACCGAGAAGAATGAGTTCACCACTGTGATGGCAAAGCCGCTCCGTGCTCAGCTTGTTAAACGGGCTTAG
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| Protein seq | MATDTSWLLLLVALVLPLVVLLARRRRSGGGSRRIPPGPLAVPVLGSLLWLRHSSANLEPLLQRLIARYGPVVSLRVGSRLSIFVADRRVAHAALVERGAALADRPDVTRSLLGETGNTITRSSYGPVWRVLRRNLVAETLHPSRVRLFAPARSWVRRVLVDKLADGARPESEPPRPRVVVETFRYAMFCLLVLMCFGERLDEAAVRAIGAAQRDWLLYVARKTSVFAFYPAVTKHIFRRRLQIGLALRRQQKELFVPLIDARRARKNHIQQAGGPPVPEKETTFEHSYVDTLLDVSLPDTDGDSALTEDELVMLCSEFLNAGTDTTATALQWIMAELVKNPSIQSKLHDEIKSKTSDDEITEEDTHDMPYLKAVILEGLRKHPPAHFVLPHKAAEDVEVGGYLIPKGATVNFMVAEMGRDEREWEKPMEFIPERFLAGGDGEGVDVTGSREVRMMPFGVGRRICAGLGVAMLHLEYFVANLVKEFEWKEVAGDEVDLTEKNEFTTVMAKPLRAQLVKRA |
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| Function | Cytochrome P450 89A2 [UniProtKB/Swiss-Prot:Q42602] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_10g0513900 | OsNip_10t0513900-01 | Chr10 | 19810238 | 19812025 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCCACGGACACCTCATGGCTCCTGCTCCTCGTCGCTCTCGTCCTCCCGCTCGTCGTCCTCCTCGCGCGGCGGCGCCGGAGCGGCGGTGGCAGCCGCCGCATCCCGCCTGGCCCGCTCGCCGTGCCGGTGCTCGGAAGCCTCCTGTGGCTGAGGCACTCCTCGGCGAACTTGGAGCCGCTCCTCCAGCGCCTGATCGCGCGGTACGGCCCCGTCGTGTCGCTGCGCGTGGGCTCCCGCCTCTCCATCTTCGTCGCCGACCGCCGCGTCGCGCACGCGGCCCTGGTGGAGCGCGGCGCCGCGCTCGCCGACCGCCCGGACGTCACGCGCTCGCTGCTCGGCGAGACCGGCAACACCATCACGCGCTCCAGCTACGGCCCCGTGTGGCGTGTCCTCCGCCGCAACCTCGTCGCCGAGACGCTGCACCCGTCGCGCGTCCGCCTGTTCGCGCCCGCGCGCTCCTGGGTTCGCCGAGTGCTCGTCGACAAGCTCGCGGACGGCGCGCGCCCCGAGTCCGAGCCGCCACGCCCGCGCGTGGTGGTGGAGACGTTCCGGTACGCCATGTTCTGCCTCCTCGTGCTCATGTGCTTCGGCGAGCGGCTCGACGAGGCCGCGGTGCGCGCCATCGGCGCCGCGCAGCGCGACTGGCTCCTGTACGTCGCGAGGAAGACGAGCGTATTCGCGTTCTACCCGGCGGTCACCAAGCACATCTTCCGCCGCCGCCTCCAAATAGGCCTCGCCCTGCGACGGCAGCAGAAGGAGCTCTTTGTGCCACTCATCGATGCCCGGCGAGCGCGCAAGAACCATATCCAGCAAGCCGGCGGCCCACCGGTGCCGGAGAAGGAGACGACGTTCGAGCACTCGTACGTCGACACGCTGCTCGACGTAAGCCTCCCCGACACCGACGGCGACAGCGCCCTCACCGAGGACGAGCTGGTGATGCTCTGCTCCGAGTTCCTCAATGCCGGCACCGACACGACGGCCACCGCGCTGCAGTGGATCATGGCCGAGCTGGTCAAGAACCCATCCATCCAATCCAAGCTCCACGACGAGATCAAGTCCAAGACCAGCGACGACGAGATCACCGAGGAGGACACCCACGACATGCCGTACCTGAAGGCCGTCATCCTCGAGGGCCTCCGCAAGCACCCGCCGGCCCACTTCGTGCTGCCGCACAAGGCGGCGGAGGACGTCGAGGTCGGCGGGTACCTCATCCCCAAGGGCGCGACGGTGAACTTCATGGTGGCCGAGATGGGAAGGGACGAGAGGGAGTGGGAGAAGCCGATGGAGTTCATCCCTGAGCGGTTCCTCGCCGGCGGCGACGGCGAGGGAGTGGACGTGACGGGCAGCCGGGAGGTCCGGATGATGCCGTTCGGCGTCGGGAGGAGGATCTGTGCCGGGCTCGGCGTTGCCATGCTACACCTGGAGTATTTCGTGGCGAATTTGGTGAAGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGACTTGACCGAGAAGAATGAGTTCACCACTGTGATGGCAAAGCCGCTCCGTGCTCAGCTTGTTAAACGGGCTTAG
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| Protein seq | MATDTSWLLLLVALVLPLVVLLARRRRSGGGSRRIPPGPLAVPVLGSLLWLRHSSANLEPLLQRLIARYGPVVSLRVGSRLSIFVADRRVAHAALVERGAALADRPDVTRSLLGETGNTITRSSYGPVWRVLRRNLVAETLHPSRVRLFAPARSWVRRVLVDKLADGARPESEPPRPRVVVETFRYAMFCLLVLMCFGERLDEAAVRAIGAAQRDWLLYVARKTSVFAFYPAVTKHIFRRRLQIGLALRRQQKELFVPLIDARRARKNHIQQAGGPPVPEKETTFEHSYVDTLLDVSLPDTDGDSALTEDELVMLCSEFLNAGTDTTATALQWIMAELVKNPSIQSKLHDEIKSKTSDDEITEEDTHDMPYLKAVILEGLRKHPPAHFVLPHKAAEDVEVGGYLIPKGATVNFMVAEMGRDEREWEKPMEFIPERFLAGGDGEGVDVTGSREVRMMPFGVGRRICAGLGVAMLHLEYFVANLVKEFEWKEVAGDEVDLTEKNEFTTVMAKPLRAQLVKRA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.869914 | 0.420093 | 1.333832 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0513400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g36980 | RBH | 0.562845 | 0.266453 | 0.323796 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0513900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017070 | SBH | 0.0 | 0.0 | 0.215859 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0017360 | SBH | 0.068878 | 0.138859 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0016810 | SBH | 0.0 | 2.382032 | 0.182930 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0017320 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017050 | SBH | 0.0 | 0.000000 | 0.365718 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0326400 | RBH | 0.3703535 | 6.3617505 | 0.1934235 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0016970 | SBH | 0.000000 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0349400 | RBH | 0.8493145 | 7.4970375 | 0.0651125 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0016750 | SBH | 0.0 | 0.024326 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0016600 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0017160 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0016810 | SBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0017250 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G016890 | SBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017040 | SBH | 0.000000 | 2.194794 | 0.000000 |
