Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_10g0434650 | OGI:10050020 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr10:15486180-15487367 | ||||||||
| Gene Symbol | OsMB39, MB39, OsMB36, MB36 | ||||||||||
| DNA seq | ATGTCGACGGCGACCCCCACGCCCAACGTCGTCGACGGCGACTGCGGCGGCACCCCGCCGTCACGGTCAGCCTCCACCATCATCGCGGCACGAACCCTCCATGTGCTCACGATTCATGGCTACTCCGACACCTTGAAATCCAACGTCGACCCTAGCCAGCACCTGCTCCTTTCCTCTCCGTTCAGCGCTGGAGGACACACCTGGTGCATCCGCTACTGCCCAATCGGGTGCACTGAGGAAAGCAAGGACTTCATCTCCATCTACCTCGTTCTCGAGGACACCATCACCGACGTAGTATCGGCACAGGTTACGTTCAGCTTGCTCGACCAACAGGGGAACCCGATGCCATCTCACACCCTCACAACCCCACTGCTTAAATTCTCTCTTCAAGGCACTCTACCTAAGGCCCTGGGGTATAACAGCTTCATCAGAAGAGACGACTTAGAGCGATCTGGACATCTCAAGGACGATTGCTTTGCCATTGGGGTCCATGTGGTTGTCACCAAGGAAGCAGAACCGTCATCCATCACCGTGCCACCATCGGACATGCACCTGCATTATGGCGATCTTCTCTCGAGTGAAGAACGGTACGCCACCGATGTTGAGTTCCTAGTTGGCGGCGAGACCTTCACCGCGCATCGATTGGTGCTCGCAGCACGATCACCTGTCTTCATGGTGGAGCTTTTTGGGCCGATGAAGGAGGGTACTACTGTAAACAAGATACATATATTTGATATGGAGGCGCAAGTATTCAGGGCTTTACTTAAGTTTATCTACACAGACATGTTGCCGGAGATGGATCAAGAAGATGAGACCGCAATGGTTCAACATCTACTTGTTGCAGCGGATAAGTATGGCTTGCATAGGCTGAAGATGATCTGTGTAGAAATATTAAGTAACCATATTGATGCCTACTCCGTGGCAACCATCTTGGTGCTAGCTGAGAAGCACTATTGCTATGGTCTCAAGGAGGCATGCTTTGAGTTCCTTAACTCCTCAGCAATATTGTCCGCGATTGTAAATACAAGTGACTTTCTGTATTTGATCCAAAGCTGCCCTGATGTTTTGGAGGACATAAGTTTCAACATCGTTGCTCGTCAATTGGAGAGAGCAATTTTCCTATCAGAAAACCAAGAAGGCCAAATCAACAGCGTAGAAATCAGAATTAATTCGGTCATGACAAATTGA
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| CDS seq | ATGTCGACGGCGACCCCCACGCCCAACGTCGTCGACGGCGACTGCGGCGGCACCCCGCCGTCACGGTCAGCCTCCACCATCATCGCGGCACGAACCCTCCATGTGCTCACGATTCATGGCTACTCCGACACCTTGAAATCCAACGTCGACCCTAGCCAGCACCTGCTCCTTTCCTCTCCGTTCAGCGCTGGAGGACACACCTGGTGCATCCGCTACTGCCCAATCGGGTGCACTGAGGAAAGCAAGGACTTCATCTCCATCTACCTCGTTCTCGAGGACACCATCACCGACGTAGTATCGGCACAGGTTACGTTCAGCTTGCTCGACCAACAGGGGAACCCGATGCCATCTCACACCCTCACAACCCCACTGCTTAAATTCTCTCTTCAAGGCACTCTACCTAAGGCCCTGGGGTATAACAGCTTCATCAGAAGAGACGACTTAGAGCGATCTGGACATCTCAAGGACGATTGCTTTGCCATTGGGGTCCATGTGGTTGTCACCAAGGAAGCAGAACCGTCATCCATCACCGTGCCACCATCGGACATGCACCTGCATTATGGCGATCTTCTCTCGAGTGAAGAACGGTACGCCACCGATGTTGAGTTCCTAGTTGGCGGCGAGACCTTCACCGCGCATCGATTGGTGCTCGCAGCACGATCACCTGTCTTCATGGTGGAGCTTTTTGGGCCGATGAAGGAGGGTACTACTGTAAACAAGATACATATATTTGATATGGAGGCGCAAGTATTCAGGGCTTTACTTAAGTTTATCTACACAGACATGTTGCCGGAGATGGATCAAGAAGATGAGACCGCAATGGTTCAACATCTACTTGTTGCAGCGGATAAGTATGGCTTGCATAGGCTGAAGATGATCTGTGTAGAAATATTAAGTAACCATATTGATGCCTACTCCGTGGCAACCATCTTGGTGCTAGCTGAGAAGCACTATTGCTATGGTCTCAAGGAGGCATGCTTTGAGTTCCTTAACTCCTCAGCAATATTGTCCGCGATTGTAAATACAAGTGACTTTCTGTATTTGATCCAAAGCTGCCCTGATGTTTTGGAGGACATAAGTTTCAACATCGTTGCTCGTCAATTGGAGAGAGCAATTTTCCTATCAGAAAACCAAGAAGGCCAAATCAACAGCGTAGAAATCAGAATTAATTCGGTCATGACAAATTGA
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| Protein seq | MSTATPTPNVVDGDCGGTPPSRSASTIIAARTLHVLTIHGYSDTLKSNVDPSQHLLLSSPFSAGGHTWCIRYCPIGCTEESKDFISIYLVLEDTITDVVSAQVTFSLLDQQGNPMPSHTLTTPLLKFSLQGTLPKALGYNSFIRRDDLERSGHLKDDCFAIGVHVVVTKEAEPSSITVPPSDMHLHYGDLLSSEERYATDVEFLVGGETFTAHRLVLAARSPVFMVELFGPMKEGTTVNKIHIFDMEAQVFRALLKFIYTDMLPEMDQEDETAMVQHLLVAADKYGLHRLKMICVEILSNHIDAYSVATILVLAEKHYCYGLKEACFEFLNSSAILSAIVNTSDFLYLIQSCPDVLEDISFNIVARQLERAIFLSENQEGQINSVEIRINSVMTN |
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| Function | BTB/POZ and MATH domain-containing protein 3 [UniProtKB/Swiss-Prot:O22286] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_10g0434650 | OsNip_10t0434650-00 | Chr10 | 15486180 | 15487367 | + | RAP2018-11-26 | ||
| CDS seq | ATGTCGACGGCGACCCCCACGCCCAACGTCGTCGACGGCGACTGCGGCGGCACCCCGCCGTCACGGTCAGCCTCCACCATCATCGCGGCACGAACCCTCCATGTGCTCACGATTCATGGCTACTCCGACACCTTGAAATCCAACGTCGACCCTAGCCAGCACCTGCTCCTTTCCTCTCCGTTCAGCGCTGGAGGACACACCTGGTGCATCCGCTACTGCCCAATCGGGTGCACTGAGGAAAGCAAGGACTTCATCTCCATCTACCTCGTTCTCGAGGACACCATCACCGACGTAGTATCGGCACAGGTTACGTTCAGCTTGCTCGACCAACAGGGGAACCCGATGCCATCTCACACCCTCACAACCCCACTGCTTAAATTCTCTCTTCAAGGCACTCTACCTAAGGCCCTGGGGTATAACAGCTTCATCAGAAGAGACGACTTAGAGCGATCTGGACATCTCAAGGACGATTGCTTTGCCATTGGGGTCCATGTGGTTGTCACCAAGGAAGCAGAACCGTCATCCATCACCGTGCCACCATCGGACATGCACCTGCATTATGGCGATCTTCTCTCGAGTGAAGAACGGTACGCCACCGATGTTGAGTTCCTAGTTGGCGGCGAGACCTTCACCGCGCATCGATTGGTGCTCGCAGCACGATCACCTGTCTTCATGGTGGAGCTTTTTGGGCCGATGAAGGAGGGTACTACTGTAAACAAGATACATATATTTGATATGGAGGCGCAAGTATTCAGGGCTTTACTTAAGTTTATCTACACAGACATGTTGCCGGAGATGGATCAAGAAGATGAGACCGCAATGGTTCAACATCTACTTGTTGCAGCGGATAAGTATGGCTTGCATAGGCTGAAGATGATCTGTGTAGAAATATTAAGTAACCATATTGATGCCTACTCCGTGGCAACCATCTTGGTGCTAGCTGAGAAGCACTATTGCTATGGTCTCAAGGAGGCATGCTTTGAGTTCCTTAACTCCTCAGCAATATTGTCCGCGATTGTAAATACAAGTGACTTTCTGTATTTGATCCAAAGCTGCCCTGATGTTTTGGAGGACATAAGTTTCAACATCGTTGCTCGTCAATTGGAGAGAGCAATTTTCCTATCAGAAAACCAAGAAGGCCAAATCAACAGCGTAGAAATCAGAATTAATTCGGTCATGACAAATTGA
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| Protein seq | MSTATPTPNVVDGDCGGTPPSRSASTIIAARTLHVLTIHGYSDTLKSNVDPSQHLLLSSPFSAGGHTWCIRYCPIGCTEESKDFISIYLVLEDTITDVVSAQVTFSLLDQQGNPMPSHTLTTPLLKFSLQGTLPKALGYNSFIRRDDLERSGHLKDDCFAIGVHVVVTKEAEPSSITVPPSDMHLHYGDLLSSEERYATDVEFLVGGETFTAHRLVLAARSPVFMVELFGPMKEGTTVNKIHIFDMEAQVFRALLKFIYTDMLPEMDQEDETAMVQHLLVAADKYGLHRLKMICVEILSNHIDAYSVATILVLAEKHYCYGLKEACFEFLNSSAILSAIVNTSDFLYLIQSCPDVLEDISFNIVARQLERAIFLSENQEGQINSVEIRINSVMTN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0436100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g29790 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0434650 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0011840 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0012040 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0011750 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0012140 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0011760 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0260400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0011910 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0278500 | RBH | 0 | 0.0005255 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0011660 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0011630 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0012060 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0011530 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0012130 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G012010 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0011470 | SBH | 0.0 | 0.0 | 7.660278 |
