Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_10g0413900 | OGI:10047120 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr10:14443785-14445502 | ||||||||
| Gene Symbol | NAC148, ONAC148 | ||||||||||
| DNA seq | GGAGCACACGCACGCGCGGCGCGACGGCGCGACCTCGCCTCGACACGAGCTCTCGTGATCTCGTCTCGCCGCGTCTAGCTCGCCGGCGCCGCCGCGCGCGCGCGTCCCCTCGCCGCCGTACGTGTAGCGGAGCGACTCCCTCTCTCCCTCCCGCCTCACCTCCGGGACCGGTCGGTCGGTCGATCGATCGACGGGGCGAGGGGATGGCGGCACCGGAAGGCCAGAACAAGTTCGCGGGCGTCCGCTTCTTGCCCAAGGACCTGGAGCTCCTCGCCATCCTCGACGCCAAGCTCCGCGGAAGCCCGTTAGGCCCCGTGGAAGCCATCTTCCACGACACGCAGATCCTCGACTTCCACCCGTACAAGCTCTACGGTATCCACCGCCTCGATCGATCGATCTCCCTCTCTCTCTCTCTTTGTCGATCTCCTTCTTCTTCTCCGGCGACGGGTGGGTGCCTGGATCAGATCATGCAGTTTTGGGGATTTTGATTCGGGATTTCGGGTGGATATTACTCGACTGATTTTGCAGAGATGTATGCTGAGGACGAGGAGGAGGAAGGCTACATCTACTTCTTCAGCACGATGCAGTTCAGATGCAGGAAGATTGTGGAGCGCGCGGCGCAGGGCGGCCGGTGGAAGGTGAACAACTGCGAGACTCTGGAGGTTGGCGGCGTCGCCGTTGGCCGGAAGTTCACCATGAATTTCTACGAGCATATCGGCGGCGACAACGACCTCATCTGGACCAACTGGGGCATGCAAGAGTTCGCCAGGATCATCGGCCCAAACAAGGAGGTATTCCATTCGGAAATCCACTTCTGAATCTTCGTTCAATGATCGGATACATTTGATCTCATTTGGGTGAAATTTTTCTGATCATTTTGGCCAAAAGCTCGCGGATCTTGCCTTGTACCGCCTATACAAGAAGAAAATAACAAGGGGGACAGGCGAGGAGAAGCCGGAAGACATCGCCGCGGCTAGCGATGGCGATACCGAGAGCAGCATGAACAAGCGTAGACGTGTAGAAGCGTCGGCGGCGGCCATGGCGCTGCCACCGCCACCGCCATCGCCAGGCCTGCCTGGAACAATGATGTTCATGGCGGCGGACCAGGCGAACGTGGCCTCGACCTCGCAGGAATGGCACGGCCAGTTCGCCAACGGCGCTGCGGCGGCGCCGAGTCCTAGCGGCTGCTGGCCCTGGGCGCCACCGCCGACACCGAGCGCAGTGGAGCCTTTCAGCTTCTGGGCCAGCGCGTCGGCGGCGACTCCTCCTGCCGCCGCGAACTACCACCCGTCGCCGCAGCCGCAGCCGCTGCCGCCGCAGGGCGGCGAGTACTACTCCAGACACGGCGCCTTCTCGGTGGCGCCCGTGCCCGCGTCCGCCTGCTCGACGCCGTCCCCGGAGGCGGCGACCAGCTGCCTCTTGGCTACGACGTCACCTCTGCCGGCGGCAGGTACTGAGGGCAGTGACAGTCAGCAGCAAGAACCCCCCTGCGAATTGATGGAATTTTGAAATTTTGGCGAATTGCTTATAGCTGATTCTGATCTGGCCGACAAATTTCCGTCAAATTCGCAGTGTTCAACTTCGTACTCTTTTTCTGACCGTTGGCTGTTACTTCACTAGTTCTACATATGTGAGACTGCATTGTTTTTTGTACTAGTATTAATCTTGGTGATCTGTTGTTCTGAAATGCTTATAAATTTTGCCCTTGTGCCTTGAAG
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| CDS seq | ATGGCGGCACCGGAAGGCCAGAACAAGTTCGCGGGCGTCCGCTTCTTGCCCAAGGACCTGGAGCTCCTCGCCATCCTCGACGCCAAGCTCCGCGGAAGCCCGTTAGGCCCCGTGGAAGCCATCTTCCACGACACGCAGATCCTCGACTTCCACCCGTACAAGCTCTACGGTATCCACCGCCTCGATCGATCGATCTCCCTCTCTCTCTCTCTTTGTCGATCTCCTTCTTCTTCTCCGGCGACGGAGATGTATGCTGAGGACGAGGAGGAGGAAGGCTACATCTACTTCTTCAGCACGATGCAGTTCAGATGCAGGAAGATTGTGGAGCGCGCGGCGCAGGGCGGCCGGTGGAAGGTGAACAACTGCGAGACTCTGGAGGTTGGCGGCGTCGCCGTTGGCCGGAAGTTCACCATGAATTTCTACGAGCATATCGGCGGCGACAACGACCTCATCTGGACCAACTGGGGCATGCAAGAGTTCGCCAGGATCATCGGCCCAAACAAGGAGCTCGCGGATCTTGCCTTGTACCGCCTATACAAGAAGAAAATAACAAGGGGGACAGGCGAGGAGAAGCCGGAAGACATCGCCGCGGCTAGCGATGGCGATACCGAGAGCAGCATGAACAAGCGTAGACGTGTAGAAGCGTCGGCGGCGGCCATGGCGCTGCCACCGCCACCGCCATCGCCAGGCCTGCCTGGAACAATGATGTTCATGGCGGCGGACCAGGCGAACGTGGCCTCGACCTCGCAGGAATGGCACGGCCAGTTCGCCAACGGCGCTGCGGCGGCGCCGAGTCCTAGCGGCTGCTGGCCCTGGGCGCCACCGCCGACACCGAGCGCAGTGGAGCCTTTCAGCTTCTGGGCCAGCGCGTCGGCGGCGACTCCTCCTGCCGCCGCGAACTACCACCCGTCGCCGCAGCCGCAGCCGCTGCCGCCGCAGGGCGGCGAGTACTACTCCAGACACGGCGCCTTCTCGGTGGCGCCCGTGCCCGCGTCCGCCTGCTCGACGCCGTCCCCGGAGGCGGCGACCAGCTGCCTCTTGGCTACGACGTCACCTCTGCCGGCGGCAGGTACTGAGGGCAGTGACAGTCAGCAGCAAGAACCCCCCTGCGAATTGATGGAATTTTGA
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| Protein seq | MAAPEGQNKFAGVRFLPKDLELLAILDAKLRGSPLGPVEAIFHDTQILDFHPYKLYGIHRLDRSISLSLSLCRSPSSSPATEMYAEDEEEEGYIYFFSTMQFRCRKIVERAAQGGRWKVNNCETLEVGGVAVGRKFTMNFYEHIGGDNDLIWTNWGMQEFARIIGPNKELADLALYRLYKKKITRGTGEEKPEDIAAASDGDTESSMNKRRRVEASAAAMALPPPPPSPGLPGTMMFMAADQANVASTSQEWHGQFANGAAAAPSPSGCWPWAPPPTPSAVEPFSFWASASAATPPAAANYHPSPQPQPLPPQGGEYYSRHGAFSVAPVPASACSTPSPEAATSCLLATTSPLPAAGTEGSDSQQQEPPCELMEF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_10g0413900 | OsNip_10t0413900-01 | Chr10 | 14443785 | 14445502 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCGGCACCGGAAGGCCAGAACAAGTTCGCGGGCGTCCGCTTCTTGCCCAAGGACCTGGAGCTCCTCGCCATCCTCGACGCCAAGCTCCGCGGAAGCCCGTTAGGCCCCGTGGAAGCCATCTTCCACGACACGCAGATCCTCGACTTCCACCCGTACAAGCTCTACGGTATCCACCGCCTCGATCGATCGATCTCCCTCTCTCTCTCTCTTTGTCGATCTCCTTCTTCTTCTCCGGCGACGGAGATGTATGCTGAGGACGAGGAGGAGGAAGGCTACATCTACTTCTTCAGCACGATGCAGTTCAGATGCAGGAAGATTGTGGAGCGCGCGGCGCAGGGCGGCCGGTGGAAGGTGAACAACTGCGAGACTCTGGAGGTTGGCGGCGTCGCCGTTGGCCGGAAGTTCACCATGAATTTCTACGAGCATATCGGCGGCGACAACGACCTCATCTGGACCAACTGGGGCATGCAAGAGTTCGCCAGGATCATCGGCCCAAACAAGGAGCTCGCGGATCTTGCCTTGTACCGCCTATACAAGAAGAAAATAACAAGGGGGACAGGCGAGGAGAAGCCGGAAGACATCGCCGCGGCTAGCGATGGCGATACCGAGAGCAGCATGAACAAGCGTAGACGTGTAGAAGCGTCGGCGGCGGCCATGGCGCTGCCACCGCCACCGCCATCGCCAGGCCTGCCTGGAACAATGATGTTCATGGCGGCGGACCAGGCGAACGTGGCCTCGACCTCGCAGGAATGGCACGGCCAGTTCGCCAACGGCGCTGCGGCGGCGCCGAGTCCTAGCGGCTGCTGGCCCTGGGCGCCACCGCCGACACCGAGCGCAGTGGAGCCTTTCAGCTTCTGGGCCAGCGCGTCGGCGGCGACTCCTCCTGCCGCCGCGAACTACCACCCGTCGCCGCAGCCGCAGCCGCTGCCGCCGCAGGGCGGCGAGTACTACTCCAGACACGGCGCCTTCTCGGTGGCGCCCGTGCCCGCGTCCGCCTGCTCGACGCCGTCCCCGGAGGCGGCGACCAGCTGCCTCTTGGCTACGACGTCACCTCTGCCGGCGGCAGGTACTGAGGGCAGTGACAGTCAGCAGCAAGAACCCCCCTGCGAATTGATGGAATTTTGA
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| Protein seq | MAAPEGQNKFAGVRFLPKDLELLAILDAKLRGSPLGPVEAIFHDTQILDFHPYKLYGIHRLDRSISLSLSLCRSPSSSPATEMYAEDEEEEGYIYFFSTMQFRCRKIVERAAQGGRWKVNNCETLEVGGVAVGRKFTMNFYEHIGGDNDLIWTNWGMQEFARIIGPNKELADLALYRLYKKKITRGTGEEKPEDIAAASDGDTESSMNKRRRVEASAAAMALPPPPPSPGLPGTMMFMAADQANVASTSQEWHGQFANGAAAAPSPSGCWPWAPPPTPSAVEPFSFWASASAATPPAAANYHPSPQPQPLPPQGGEYYSRHGAFSVAPVPASACSTPSPEAATSCLLATTSPLPAAGTEGSDSQQQEPPCELMEF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.364797 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0413700 | RBH | 0.142192 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g27380 | RBH | 0.0 | 0.0 | 0.093784 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0413900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0010550 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0010690 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0010530 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0010910 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0010730 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0244400 | RBH | 0.00883 | 0 | 0.0235555 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0010760 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0263500 | RBH | 0.028027 | 0 | 0.008428 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0010550 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0010510 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0010950 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0010520 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0010990 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G010870 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0010790 | RBH | 0.0 | 0.0 | 0.0 |
