Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_09g0561000 | OGI:09054090 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr09:22292345-22295154 | ||||||||
| Gene Symbol | WAK90, OsWAK90 | ||||||||||
| DNA seq | TGGTAGTAGTGTGGTAGGCGTAGAAGAAAATGGGGTAGGTGTGTAGAAGGAGCGATTGTGCCAGCGATGACGATGCTTCCGGCGACGGCGGCGGCGCTGCTGGTGCTGGTGCTGCAGCTGATGTGGTCGGCGGAAGCGCAGGTGGCGGTGGGCTCAGGGCCGCCGGCGGGCTGCCCGGACAGGTGCGGCAACGTGAGCGTGCCGTTCCCGTTTGGCATCCGCGACGGGTGCTCCCTCGAGGGATTCGGCCTCACCTGCAACACCACGAGCAATCCCCCGCGCCTGATGATCGGCAACAGCACACTGCAAGTCGTCAACATCTCGCTGGCCAACTCCACGCTGCGCGCCGTCGACATCGACGGCGCCGTGAACATCACCTACGGGCAGATCGACGGCAACGGCACGTGGGTCGGCGTCGTCGCGAGCCCGTACATCGTGAACGAGACCCTGAACCAGCTCCTCGTCACGGGGTGCAACATCCAGGTAACCCTTGTCGGCAGCGGCGGGAACGTCATCTCCGGCTGCTCTTCCTTCTGCTCCATCAACGACATGTACACGGGTGGCGTGTTCAGAAGCCCAGGCAACAAGTGCGCGGGCATCGGTTGCTGCCAGCAGCAGGTCTCCATCGGCCGCCCCTCCTACCGCGTGGAATTGACGAACCTGGACAGGGATCGTGAGTTCAGCGGTAGGGTGCCCGAAGCGGTGCGCATCGCCGAGCTGGGCTGGTTCGACGGCCTCGCCGCCGACCTGCTCAACGTGTCGTTGGCGGACACCTCGCGCCGGAACCCGGTTCCGGTGGTGCTGGATTGGGCGGTGGCGTCCACCGGCCTGGATGTCACGCTCAACGCCGGGCTGAACAAACAGGCTGCCAATAACTGGTCCTGCCCCACGGCCGCCTCGGGCAGGAAGAGCGCGTGCATAAGCAGCAACAGCTTCTGCCGCAACATCGCCGACAACTACCGAAGCGGTTACGTCTGCCGTTGTGACAAGGGGTACGACGGGAACCCGTACGTCGCCGGCGGATGCCAAGACATCAACGAGTGCGAGCGGGCGAAGGAGAACGGCTGCTTCGGCGAGTGCACCAACACGCCGGGAGCCTTCTTGTGCAGGTGCCCGCACGGTGCCCGTGGTAACGCCACCATTCCAAATGGCTGCACCAAATCCAATCTAGGTAGCTAAATTAAATCTGCTCGCCATTTTCGAATTTATTCAGAGATTATTGTATATATAGCTACCTCCTCCGTCTTACAATATATCTACCAAGCTTTAGCTATAGAGGTGACTAGTGACTGTTCTCTCTTCCAAACAAAGATGCAAACTCTGTTCTTCTAATCTACAGGTTAAATGTCATTAACTCTAATGAGAACTTCATTTTCCTATTGTGCTCCTAGGTTTAACAATTGGAGTTGGAATTGGTAGTGGTGCCGGCCTTTTTATCCTGGCACTTGGTGCTGTCTTTTTAACACGTAGGATTAAACAACGGAGAGCAAGAACACTGAGACAGAAGTTCTTCAAACAGAACCGTGGCCATTTGTTGCAACAATTGGTATCTCAAAAGGCCGACATTGCGGAAAGAATGATCATCCCCTTGGCAGAACTAGAAAAGGCCACAAACAACTTTGACGAATCGCGTGAGCTTGGAGGAGGAGGACATGGCACCGTATACAAAGGTATTCTCTCAAACCTTCATGTTGTCGCAATCAAGAAATCAAATGTGACAGTCCAAAGGGAGATTGATGAGTTCATAAACGAGGTAGCCATTCTATCATAAATCAACCACCGTAATGTGGTGAAACTTTTTGGATGTTGTCTTGAGACCGAAGTGCCATTGTTGGTTTATGAATTCATATCAAATGGTACACTTTATCATCATCTTCATGTTGAAGGACCAACATCGTTGCCATGGGAAGATAGGCTCAGAATTGCTACTGAAACAGCTAGATCCCTCACTTACCTTCACTCTGCCGTGTCATTTCCTATAATCCATAGGGATATCAAGTCCCATAATATCCTATTGGATGGCTCACTAACAGCAAAAGTCTCAGACTTTGGAGCTTCAAGGTGCATCCCAACTGAACAAAATGGGGTTACAACTGCTATTCAAGGAACACTAGGATACCTAGACCCCATATATTACTACACAGGACGTCTCACAGATAAGAGTGATATTTATAGCTTCGGCGTTGTTTTAATGGAGTTGCTTACTAGGAAAAAACCATATTCATACAGATCGGCTGAGGATGAGAGCCTTGTTGCACATTTCAGTACCCTACATGCACAGGGCAACTTGGGTGACATACTTGATGCGCAGGTTATAGAGGAGGGAACAAAGGAAGTTAATGATGTAGCCACATTAGCTGTGGCATGTGCCAAGTTGAAAGCAGAAGAGCGACCGACTATGAGACAGGTGGAAATGACACTCGAGAGCATTCGGCAAGAAGTACTGCATAGTGTGAGCACAAAGAAATCTAAGGAGCTTCACGTCTCATGGAACCATGCAATAAGTGAGGGTACAAACTTGGAGACAACTAGGCAATATAGTCTTGAAGAAGAGTACTTGTTATCATCGAGGTACCCCCGGTAGCAGTTTTTCCATTTTTCTTGTGTGAGTTTGGATCAATATAGAAGGCTCGTGTTGTCCCCAATGTACAAGGTCTCCATGGGTTTTTTTTTATTTATCCATGTATGATATGCATGTAGTATTTCATAGCTAAATGTAACATCTTATTTTTATTGTTCTTCATCTGAATGTGTATTTTTTTCTGTTTGATTTCATCCAAGTAAAGGTCAAGATATCCTTTGTATTGTAT
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| CDS seq | ATGACGATGCTTCCGGCGACGGCGGCGGCGCTGCTGGTGCTGGTGCTGCAGCTGATGTGGTCGGCGGAAGCGCAGGTGGCGGTGGGCTCAGGGCCGCCGGCGGGCTGCCCGGACAGGTGCGGCAACGTGAGCGTGCCGTTCCCGTTTGGCATCCGCGACGGGTGCTCCCTCGAGGGATTCGGCCTCACCTGCAACACCACGAGCAATCCCCCGCGCCTGATGATCGGCAACAGCACACTGCAAGTCGTCAACATCTCGCTGGCCAACTCCACGCTGCGCGCCGTCGACATCGACGGCGCCGTGAACATCACCTACGGGCAGATCGACGGCAACGGCACGTGGGTCGGCGTCGTCGCGAGCCCGTACATCGTGAACGAGACCCTGAACCAGCTCCTCGTCACGGGGTGCAACATCCAGGTAACCCTTGTCGGCAGCGGCGGGAACGTCATCTCCGGCTGCTCTTCCTTCTGCTCCATCAACGACATGTACACGGGTGGCGTGTTCAGAAGCCCAGGCAACAAGTGCGCGGGCATCGGTTGCTGCCAGCAGCAGGTCTCCATCGGCCGCCCCTCCTACCGCGTGGAATTGACGAACCTGGACAGGGATCGTGAGTTCAGCGGTAGGGTGCCCGAAGCGGTGCGCATCGCCGAGCTGGGCTGGTTCGACGGCCTCGCCGCCGACCTGCTCAACGTGTCGTTGGCGGACACCTCGCGCCGGAACCCGGTTCCGGTGGTGCTGGATTGGGCGGTGGCGTCCACCGGCCTGGATGTCACGCTCAACGCCGGGCTGAACAAACAGGCTGCCAATAACTGGTCCTGCCCCACGGCCGCCTCGGGCAGGAAGAGCGCGTGCATAAGCAGCAACAGCTTCTGCCGCAACATCGCCGACAACTACCGAAGCGGTTACGTCTGCCGTTGTGACAAGGGGTACGACGGGAACCCGTACGTCGCCGGCGGATGCCAAGACATCAACGAGTGCGAGCGGGCGAAGGAGAACGGCTGCTTCGGCGAGTGCACCAACACGCCGGGAGCCTTCTTGTGCAGGTGCCCGCACGGTGCCCGTGGTAACGCCACCATTCCAAATGGCTGCACCAAATCCAATCTAGGTAGCTAA
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| Protein seq | MTMLPATAAALLVLVLQLMWSAEAQVAVGSGPPAGCPDRCGNVSVPFPFGIRDGCSLEGFGLTCNTTSNPPRLMIGNSTLQVVNISLANSTLRAVDIDGAVNITYGQIDGNGTWVGVVASPYIVNETLNQLLVTGCNIQVTLVGSGGNVISGCSSFCSINDMYTGGVFRSPGNKCAGIGCCQQQVSIGRPSYRVELTNLDRDREFSGRVPEAVRIAELGWFDGLAADLLNVSLADTSRRNPVPVVLDWAVASTGLDVTLNAGLNKQAANNWSCPTAASGRKSACISSNSFCRNIADNYRSGYVCRCDKGYDGNPYVAGGCQDINECERAKENGCFGECTNTPGAFLCRCPHGARGNATIPNGCTKSNLGS |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_09g0561000 | OsNip_09t0561000-01 | Chr09 | 22292353 | 22293718 | + | RAP2018-11-26 | ||
| CDS seq | ATGACGATGCTTCCGGCGACGGCGGCGGCGCTGCTGGTGCTGGTGCTGCAGCTGATGTGGTCGGCGGAAGCGCAGGTGGCGGTGGGCTCAGGGCCGCCGGCGGGCTGCCCGGACAGGTGCGGCAACGTGAGCGTGCCGTTCCCGTTTGGCATCCGCGACGGGTGCTCCCTCGAGGGATTCGGCCTCACCTGCAACACCACGAGCAATCCCCCGCGCCTGATGATCGGCAACAGCACACTGCAAGTCGTCAACATCTCGCTGGCCAACTCCACGCTGCGCGCCGTCGACATCGACGGCGCCGTGAACATCACCTACGGGCAGATCGACGGCAACGGCACGTGGGTCGGCGTCGTCGCGAGCCCGTACATCGTGAACGAGACCCTGAACCAGCTCCTCGTCACGGGGTGCAACATCCAGGTAACCCTTGTCGGCAGCGGCGGGAACGTCATCTCCGGCTGCTCTTCCTTCTGCTCCATCAACGACATGTACACGGGTGGCGTGTTCAGAAGCCCAGGCAACAAGTGCGCGGGCATCGGTTGCTGCCAGCAGCAGGTCTCCATCGGCCGCCCCTCCTACCGCGTGGAATTGACGAACCTGGACAGGGATCGTGAGTTCAGCGGTAGGGTGCCCGAAGCGGTGCGCATCGCCGAGCTGGGCTGGTTCGACGGCCTCGCCGCCGACCTGCTCAACGTGTCGTTGGCGGACACCTCGCGCCGGAACCCGGTTCCGGTGGTGCTGGATTGGGCGGTGGCGTCCACCGGCCTGGATGTCACGCTCAACGCCGGGCTGAACAAACAGGCTGCCAATAACTGGTCCTGCCCCACGGCCGCCTCGGGCAGGAAGAGCGCGTGCATAAGCAGCAACAGCTTCTGCCGCAACATCGCCGACAACTACCGAAGCGGTTACGTCTGCCGTTGTGACAAGGGGTACGACGGGAACCCGTACGTCGCCGGCGGATGCCAAGACATCAACGAGTGCGAGCGGGCGAAGGAGAACGGCTGCTTCGGCGAGTGCACCAACACGCCGGGAGCCTTCTTGTGCAGGTGCCCGCACGGTGCCCGTGGTAACGCCACCATTCCAAATGGCTGCACCAAATCCAATCTAGGTAGCTAA
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| Protein seq | MTMLPATAAALLVLVLQLMWSAEAQVAVGSGPPAGCPDRCGNVSVPFPFGIRDGCSLEGFGLTCNTTSNPPRLMIGNSTLQVVNISLANSTLRAVDIDGAVNITYGQIDGNGTWVGVVASPYIVNETLNQLLVTGCNIQVTLVGSGGNVISGCSSFCSINDMYTGGVFRSPGNKCAGIGCCQQQVSIGRPSYRVELTNLDRDREFSGRVPEAVRIAELGWFDGLAADLLNVSLADTSRRNPVPVVLDWAVASTGLDVTLNAGLNKQAANNWSCPTAASGRKSACISSNSFCRNIADNYRSGYVCRCDKGYDGNPYVAGGCQDINECERAKENGCFGECTNTPGAFLCRCPHGARGNATIPNGCTKSNLGS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_09g0561000 | OsNip_09t0561000-02 | Chr09 | 22292345 | 22295154 | + | IsoSeq | ||
| CDS seq | ATGAATTCATATCAAATGGTACACTTTATCATCATCTTCATGTTGAAGGACCAACATCGTTGCCATGGGAAGATAGGCTCAGAATTGCTACTGAAACAGCTAGATCCCTCACTTACCTTCACTCTGCCGTGTCATTTC |
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| Protein seq | MNSYQMVHFIIIFMLKDQHRCHGKIGSELLLKQLDPSLTFTLPCHF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0561500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g38800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0561000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0019680 | RBH | 0.0 | 6.555955 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0019770 | SBH | 0.0 | 4.691954 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0019980 | RBH | 0.0 | 3.058061 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0019760 | SBH | 0.0 | 0.011778 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0019970 | SBH | 0.030597 | 0.000000 | 0.120815 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0378100 | RBH | 0.1275405 | 8.946485 | 0.235191 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0019760 | RBH | 0.000000 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0364600 | SBH | 0 | 0 | 0.0083205 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0019880 | SBH | 0.0 | 0.335794 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0019610 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0019620 | SBH | 0.0 | 6.044867 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0019660 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0019780 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G020150 | RBH | 0.0 | 0.202357 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0019930 | SBH | 0.0 | 7.944756 | 0.0 |
