Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNip_09g0506700 OGI:09057300 | 16/16 Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) Chr09:19613507-19619199
Gene Symbol OsFbox498, Os_F0145
DNA seq

ATGGGGTTGCTGGTCCTCAAGCGGCTCATGTCCGTGCAACAGGAGCGGCGGCATATCCAAGCCCGTAGTAAGCCTACCTCCTTCTGCCTCTCTTTAGTGTCTCTCAACTCTCATCTTGTTCAGAATTTAATGCATATGTTTCTTGAGCAAATTATTCGGAAACCTTTAGGTATTGTGTATTTGTGTTTCACGGTTCCTTCTTAGGAAAAAAATTAACTTTTTTTTTTGTGAGGAGAACAAACTGACTCTTTTGAGCTAAACTAGTAAACTGGCTACACAGTCTGTACACCGAAATTTCACAAGAATCTGCATCTTGCTTACAAGAAGATTTGGGAGAAGTTTTGGGGAGAAATATGTATACCACTGGATGACAAGTTTCACTGTAATGCCTATTGGGCTTGGGCAGAACCTATGACGAGCCACTATGTTATGTATGTGCTCTAAAGAAGTGTAGAATAAAAGAGAGAGTTCTTTATTTCAACAAAAAGTACCAATGCTAAACTGAACTGTTTTTTTTCCCTAATGGAAACAAATTGGATTTATAGCCATGAATGTTCTTTCACAAAAGTTGGACAAGGGAACCAAACTGATTTATTTGTACCATGATTTTTTTGTTTCCGTTGTTAATGTCTGTACACATGTGATGTGCTGCAGATTTTTTTTATTGCTTCAGTGGCTAAAAGAAAGGGCTCAGTCTGTCTACAACTTGCAAATTCTGAAGGCGGCAAAATAATGGGATATTCAGGGTTGAACCTTCCAGAGGTATGACACCAAATGATGATAATGTAAGACTTCTATTAGAGGAAAAGCATTACTATGAGTTTATCACTGCTGTAAGTAGCCTCTAAATGCACCCCTCGGCACCTATAGTAAAACTTTTTGAACAAATCTTTAGTGCTGGTTCTGCAACCTCCTAAAAGTTCTGCATGAGTACCTTTTCTCCGTTCTAGCTGTTATACCTTTGGGGACTGCTAATGCGCGGGTGATACCTGCACCCCCCTCCCCGTGTACGTCTCTCTTCTCTCCCTTCCTCCTCCTCTTCTTCTCTTCCCTGTTACAGTACACAACAAAATTTTTTAAAAAAAACAAAAATTGGAAAAATTTATGTAAATAAATATTATATATAAAAAATTTGAATTTAAATTTGAATTTGTATGTAAACTTTTGACTTATAAACTTTGGATCTATAAACTTTAGGTGTATAAACTTTAGATGTATAGAAATACTATATATAGAAAATATTTGAATTCAAATTTAAATTTGAATCGGGTATGTAAACTTTTGGCTTATAAACTTTGGATCTATAAACTTTAGGTGTATAAATTTTAGATGTATAGAAATACTATATATAGAAAATATTTGAATTTAAATTAAAAATTAAATCAGATATAATTCAAATTCAAATTTGAAACATGTATATAAAACTTTTGACTTATAAACTTTAGTTCTATAAACTTTAGATCTAAAAACTTTAGGTCTATAAACTTTAGATGTATAGAAATACTATATATAAAAAATATTTGAATTCAAATTCAAATTTGAATCGGATATATAAACTTTTGGTCTCTAAACTTTAGATGTGTAAACTTGAGGTGTATAAACTTTAGGTGCATAAATTTACTAAAATAGGAAAGTAATGCGGTGCCAAAAAAAGAAATCAGGTGGAGGGAGGAGGGGGGGCAACTGATCGCTACCAGATCGCCCTTGCGATCGATCGCGGATCAGTTTTTCCGTATACCTTTACCCCTCCCGCTGAAAACTGTTGGTGATGGGTCTTAGATCCGCAGTTGGTTTTTTAGAGATTCTTCCCCCCCCCCCCCCCTCCCCTTATCAGTGACCGGGTTCATGTACTTCTTTTTCTGCTATTACTGTGGTTTAGATGCAGTTTCCTAATGTATGTTTACAGAACCGTTGGCCTGCAATTTGTCTTTAGTATCTTCCTCATCATCCATCAAGCGTATGCCTTCCTAGTTCAGTTGAAAACTAACTTTCATAAAGAAGTTAATACCGGCAACTTGGAAGTGATGAGAACTGCCCATGGACATCTGAGTTTGGTCACTGCTGGTAACCAGAGTTATATGTGGCACAAATGTTTGTCAATATCCCATTCTGCTCTCAAAATCTTCTTCAGTGGGCATTGAGATGCTGGGCAATATGTCTGTTGCAGGATTGTTGACAACTAACATGTCTAGACTAGGAGAGTGAGAAAGCTTTGAAGTAAACCATGCCCATTTTGCTGGCTTCACAGTTCATGTGAAGTGGTTTCACTACTGTTCGCTCTAATTTCAGTATAAATGGTGGGAGAAGTGAATATTCTTGTAGGATGGCGTTCTTTTGTTTTCCTGGTCTGTTCAATCTATTATCTCTCACGGTGTAGCTGCCAAAGCTATTGGTTTCTTACATCGGCTTTCTGCCAAATCTGTTGAGAATTGTACCTTATAAAGAATATATGTGTATTTTTTTCTATTTATTTTCTATCTTTTATAATTTGTAGGATGCTATTGTACAAAAAACACATCATTTCATACATCTTAGTTTACCCACATATGCTCAGATATAATATATTATTGGCTAGTCCTTGCCTAACTAAGCATAAGTTTCATATTAGTTTATCATTACTAGTCACTGACGACGGTCTACATACGGTATCCTTTTCAGGACAGACTCTACTAAAACTTTGAAAGAGAAAAGGAGCAAAATAAAAATGCAGTTCAATTTGCCTACCACAAATTCCAATGCGCTATACGGATATACCCTATATGCTAGTACTGTTTTCCCTTCCAACTGAGGCAATAGTTTACATTCACAATATTTTCCTGATTATACATGCAGGACATCTGGAGTCATATACACTCCCTAATGCCATTACGGGATGCTGCTCGTGCTGCGTGCGTGTCTCGTGCTTTTCGTAGTTTCTGGCGATATCATCCTAATCTTATATTTCGTATAGAAACACCGGACTTGAATTTCATCAAGAAAGTTGATTGCATTCTGAAAAACCACTCAGGCATTGGCATCAAATCATTAAGGTTTGAATCTGGTATATTTTACAATGCCAGCACCAGTTATTATCTCGACAGTTGGCTTCAGATTGCTGTTACACCATTGATTGAAGAACTCACTCTTGGGATATTATCGTACAACACAAATTACTTTGATTCAAAATATGATGATGAGTACAACTTCCCGTGCTCACTTTTATCTGATGGGAGAGGAAGCTCAATGCGGCATCTTTATCTTAGCAGGTGTTCTTTCCATCCCACAATCAACCTTGAATTAAGAAACTTGACGAGGCTGCATCTGGCCTTTGTACATATTACAGGCAATGAGTTAGGGTGCGTTCTCTCTAATTCTTATGCTTTGGAGCGGTTGGAACTTAACTATTGCTATGGAATAATTTGTGTGAAGATACCTTGCCTGTTGCAACGCCTTAGCCACCTGGAAGTGTTTGAATGTAGAATGCTGCAAGTCATAGAGAATAGTGCTCCAAATCTTGGTAGTTTTCACTTTGGAATTAATCATGTGCAACTCTTGCTTGGCGAATCGTTGCAAATGAAGAGCCTATCCATGTGCTATCCTGGTGCTGTCTATTATGCTTGTGCAGAGCTTCCATCCAATGTGCCAAATCTTGAAACTCTAACCATTGGCTCTCCTCATGAGGTACACCCAAAAACTTTAAATGATTATGGACTTGCTATATCCTTACAACAGTACTTTAGAAGAATATCATCAGTCTGATTATCTTTCCGCAGATGGTCGACACACCAATGTTGCCTAGCAAATTCCTCCACCTCAAGTGCTTGACTATTTCTCTTGTTGGAATGGTCACTTTTTCCCCAGCCTATGATTATTTTTCTCTGGTTTCTTTTCTTGATGCTTCTCCTTCCTTGGAGACTTTCTTTCTGGATGTAAGTTAATTTTCATTCTTTAAACTTATGTATTGGCCATTTACAGTGGTAACCATCAATTGAAGCACATTGGCTTTTCATCTTCAGGTATCACAAGAACGCATGGGGCATGTCTCAATTTTTGGAGATTCCTTGCAATTGAGGCAGATGCCTGAACACCATCGTCATGGCAACCTCCAGAGCGTGAAGATCACTGGTTTCTGCTCTGCAAAGAGCTTGATCGAGCTAACATGTTATATTCTTGACAATACAACCTCACTCAAGTGCCTAACACTAGATACAACCCGTGGTGTTTCTAGCTGTTCTACAGGCGAACACAAGAAATGTTTTCCTATAGGCAAGATGCTCACTGAAGCCAACAGAGCGGTATTGGCAATTGAAACATTCATCGAGCGAAAAGTTCCCTCGACAGTTAAATTAGCTGTTACGAAGCCTTGCAGCCGTTGTCATGTTAAATCTTAGTTGTGTTTTTCTCAGCATTTATCCAGCGTAGATGGTTATGTAATTTCTCTCTTCATTTACTACATTATTATAATACTGTCCAATAAGTTTTGTAACTTTACATGCTTGCGTTTCTCTTCATTAACCCAGGACACAACTGAATCATTTTCGTCTTTCATCTCTAAATTTTGCTAGTGACATTAACTGGAACATCTACCTTTTGTTTGACACCAAGTGATAAACAGGTTAATAAGAGGTTTCTGCATTTGAATTTCAATTACAGATGCTCTACCAGCTATACTATCAACATATTTTTGGTTGCATTGGGCTGACAAGATATCTACAGCTTGACCTCAATTCCTAAAACAAATTTCAACACTCAACCATGGTTAGTTGCACATTCAAGAAGTCAGGTAACAAGCCAACGAAAAGAAAAATCTGGCAGCCACTGGATTTAATTTGCTGATACATGAAGGTCATCAAGAGCGTAGAATCATTTCATTTCTATCCCAGTTGGTAGATTTTGCTGATACATGAAGGTCATCATTCATTTCTATCCCAATTGGTAAATGCAACAAATCGTAACAATTGGTAAATCAACCATAACAACTCTCAAATCCCTAAAGTGACAGGGGACTAAGCGATACAATCTCTTACTACTACACATCCAACTCTCAAATCCCTAAAGCGATATACGAGGAGCCCTCGGATTGCAGGCCATCGTGGAGTATCTCAATCTCTGGTCGTTTTTGCGGGAGATAGAGCTCTCGGATCACCAGGACCAATTTATTTGGAAATGGGAAAGTTCAGGCATGTACTCCTCCCGCTCCGCCTACCAAGCATTGTTCCTCGGTCGAATCCCGTTCCAATCCACGCCGATCTAGAAATCGCTGGCGCCGCCGCGCTGCCGTTACTTCAGCTGGCTGGTCGCACTCAACCGCTGCTGGACGGCGGACAGGTTAAGCATCAGGGGCTTGCCCCACCTTAGCATGTGTGTCCTATGCGATCAGCACGAGGAAAGCATCAACCACATTTTGGTCGCATGCCCAGAATCAAGACAGCTCTGGTGGCTACTGCTCTCGGCAATCGGTCGCTCGGAATGCTTGCCTGTCAATGAAACCTCATTCCACTCCTGGTTGTGTGACAAGAGGGAAACCTTACCGAGCTCTCAACGGCGAGGTTTTGATACCATTGCTACTCTCGCAGCATGGACTATCTAGAAGGAGCGAAATAACAGGGTGTTCAACCAGAAGCACAGAAGCTGGACAGAAGTGGCAAGGGCAATGGCGGAAGAGGCAGCGCTGTGGCGGCTCGCCAATACTGCCATACCGGCCACGCCTTTAG

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CDS seq

ATGGGGTTGCTGGTCCTCAAGCGGCTCATGTCCGTGCAACAGGAGCGGCGGCATATCCAAGCCCGTAGTAAGCCTACCTCCTTCTGCCTCTCTTTAGTGTCTCTCAACTCTCATCTTGTTCAGAATTTAATGCATATGTTTCTTGAGCAAATTATTCGGAAACCTTTAGTGGCTAAAAGAAAGGGCTCAGTCTGTCTACAACTTGCAAATTCTGAAGGCGGCAAAATAATGGGATATTCAGGGTTGAACCTTCCAGAGGACATCTGGAGTCATATACACTCCCTAATGCCATTACGGGATGCTGCTCGTGCTGCGTGCGTGTCTCGTGCTTTTCGTAGTTTCTGGCGATATCATCCTAATCTTATATTTCGTATAGAAACACCGGACTTGAATTTCATCAAGAAAGTTGATTGCATTCTGAAAAACCACTCAGGCATTGGCATCAAATCATTAAGGTTTGAATCTGGTATATTTTACAATGCCAGCACCAGTTATTATCTCGACAGTTGGCTTCAGATTGCTGTTACACCATTGATTGAAGAACTCACTCTTGGGATATTATCGTACAACACAAATTACTTTGATTCAAAATATGATGATGAGTACAACTTCCCGTGCTCACTTTTATCTGATGGGAGAGGAAGCTCAATGCGGCATCTTTATCTTAGCAGGTGTTCTTTCCATCCCACAATCAACCTTGAATTAAGAAACTTGACGAGGCTGCATCTGGCCTTTGTACATATTACAGGCAATGAGTTAGGGTGCGTTCTCTCTAATTCTTATGCTTTGGAGCGGTTGGAACTTAACTATTGCTATGGAATAATTTGTGTGAAGATACCTTGCCTGTTGCAACGCCTTAGCCACCTGGAAGTGTTTGAATGTAGAATGCTGCAAGTCATAGAGAATAGTGCTCCAAATCTTGGTAGTTTTCACTTTGGAATTAATCATGTGCAACTCTTGCTTGGCGAATCGTTGCAAATGAAGAGCCTATCCATGTGCTATCCTGGTGCTGTCTATTATGCTTGTGCAGAGCTTCCATCCAATGTGCCAAATCTTGAAACTCTAACCATTGGCTCTCCTCATGAGGTATCACAAGAACGCATGGGGCATGTCTCAATTTTTGGAGATTCCTTGCAATTGAGGCAGATGCCTGAACACCATCGTCATGGCAACCTCCAGAGCGTGAAGATCACTGGTTTCTGCTCTGCAAAGAGCTTGATCGAGCTAACATGTTATATTCTTGACAATACAACCTCACTCAAGTGCCTAACACTAGATACAACCCGTGGTGTTTCTAGCTGTTCTACAGGCGAACACAAGAAATGTTTTCCTATAGGCAAGATGCTCACTGAAGCCAACAGAGCGAATCAAGACAGCTCTGGTGGCTACTGCTCTCGGCAATCGGTCGCTCGGAATGCTTGCCTGTCAATGAAACCTCATTCCACTCCTGGTTGTGTGACAAGAGGGAAACCTTACCGAGCTCTCAACGGCGAGGTTTTGATACCATTGCTACTCTCGCAGCATGGACTATCTAGAAGGAGCGAAATAACAGGGTGTTCAACCAGAAGCACAGAAGCTGGACAGAAGTGGCAAGGGCAATGGCGGAAGAGGCAGCGCTGTGGCGGCTCGCCAATACTGCCATACCGGCCACGCCTTTAG

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Protein seq

MGLLVLKRLMSVQQERRHIQARSKPTSFCLSLVSLNSHLVQNLMHMFLEQIIRKPLVAKRKGSVCLQLANSEGGKIMGYSGLNLPEDIWSHIHSLMPLRDAARAACVSRAFRSFWRYHPNLIFRIETPDLNFIKKVDCILKNHSGIGIKSLRFESGIFYNASTSYYLDSWLQIAVTPLIEELTLGILSYNTNYFDSKYDDEYNFPCSLLSDGRGSSMRHLYLSRCSFHPTINLELRNLTRLHLAFVHITGNELGCVLSNSYALERLELNYCYGIICVKIPCLLQRLSHLEVFECRMLQVIENSAPNLGSFHFGINHVQLLLGESLQMKSLSMCYPGAVYYACAELPSNVPNLETLTIGSPHEVSQERMGHVSIFGDSLQLRQMPEHHRHGNLQSVKITGFCSAKSLIELTCYILDNTTSLKCLTLDTTRGVSSCSTGEHKKCFPIGKMLTEANRANQDSSGGYCSRQSVARNACLSMKPHSTPGCVTRGKPYRALNGEVLIPLLLSQHGLSRRSEITGCSTRSTEAGQKWQGQWRKRQRCGGSPILPYRPRL

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNip_09g0506700 OsNip_09t0506700-00 Chr09 19613507 19619199 + RAP2018-11-26
CDS seq

ATGGGGTTGCTGGTCCTCAAGCGGCTCATGTCCGTGCAACAGGAGCGGCGGCATATCCAAGCCCGTAGTAAGCCTACCTCCTTCTGCCTCTCTTTAGTGTCTCTCAACTCTCATCTTGTTCAGAATTTAATGCATATGTTTCTTGAGCAAATTATTCGGAAACCTTTAGTGGCTAAAAGAAAGGGCTCAGTCTGTCTACAACTTGCAAATTCTGAAGGCGGCAAAATAATGGGATATTCAGGGTTGAACCTTCCAGAGGACATCTGGAGTCATATACACTCCCTAATGCCATTACGGGATGCTGCTCGTGCTGCGTGCGTGTCTCGTGCTTTTCGTAGTTTCTGGCGATATCATCCTAATCTTATATTTCGTATAGAAACACCGGACTTGAATTTCATCAAGAAAGTTGATTGCATTCTGAAAAACCACTCAGGCATTGGCATCAAATCATTAAGGTTTGAATCTGGTATATTTTACAATGCCAGCACCAGTTATTATCTCGACAGTTGGCTTCAGATTGCTGTTACACCATTGATTGAAGAACTCACTCTTGGGATATTATCGTACAACACAAATTACTTTGATTCAAAATATGATGATGAGTACAACTTCCCGTGCTCACTTTTATCTGATGGGAGAGGAAGCTCAATGCGGCATCTTTATCTTAGCAGGTGTTCTTTCCATCCCACAATCAACCTTGAATTAAGAAACTTGACGAGGCTGCATCTGGCCTTTGTACATATTACAGGCAATGAGTTAGGGTGCGTTCTCTCTAATTCTTATGCTTTGGAGCGGTTGGAACTTAACTATTGCTATGGAATAATTTGTGTGAAGATACCTTGCCTGTTGCAACGCCTTAGCCACCTGGAAGTGTTTGAATGTAGAATGCTGCAAGTCATAGAGAATAGTGCTCCAAATCTTGGTAGTTTTCACTTTGGAATTAATCATGTGCAACTCTTGCTTGGCGAATCGTTGCAAATGAAGAGCCTATCCATGTGCTATCCTGGTGCTGTCTATTATGCTTGTGCAGAGCTTCCATCCAATGTGCCAAATCTTGAAACTCTAACCATTGGCTCTCCTCATGAGGTATCACAAGAACGCATGGGGCATGTCTCAATTTTTGGAGATTCCTTGCAATTGAGGCAGATGCCTGAACACCATCGTCATGGCAACCTCCAGAGCGTGAAGATCACTGGTTTCTGCTCTGCAAAGAGCTTGATCGAGCTAACATGTTATATTCTTGACAATACAACCTCACTCAAGTGCCTAACACTAGATACAACCCGTGGTGTTTCTAGCTGTTCTACAGGCGAACACAAGAAATGTTTTCCTATAGGCAAGATGCTCACTGAAGCCAACAGAGCGAATCAAGACAGCTCTGGTGGCTACTGCTCTCGGCAATCGGTCGCTCGGAATGCTTGCCTGTCAATGAAACCTCATTCCACTCCTGGTTGTGTGACAAGAGGGAAACCTTACCGAGCTCTCAACGGCGAGGTTTTGATACCATTGCTACTCTCGCAGCATGGACTATCTAGAAGGAGCGAAATAACAGGGTGTTCAACCAGAAGCACAGAAGCTGGACAGAAGTGGCAAGGGCAATGGCGGAAGAGGCAGCGCTGTGGCGGCTCGCCAATACTGCCATACCGGCCACGCCTTTAG

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Protein seq

MGLLVLKRLMSVQQERRHIQARSKPTSFCLSLVSLNSHLVQNLMHMFLEQIIRKPLVAKRKGSVCLQLANSEGGKIMGYSGLNLPEDIWSHIHSLMPLRDAARAACVSRAFRSFWRYHPNLIFRIETPDLNFIKKVDCILKNHSGIGIKSLRFESGIFYNASTSYYLDSWLQIAVTPLIEELTLGILSYNTNYFDSKYDDEYNFPCSLLSDGRGSSMRHLYLSRCSFHPTINLELRNLTRLHLAFVHITGNELGCVLSNSYALERLELNYCYGIICVKIPCLLQRLSHLEVFECRMLQVIENSAPNLGSFHFGINHVQLLLGESLQMKSLSMCYPGAVYYACAELPSNVPNLETLTIGSPHEVSQERMGHVSIFGDSLQLRQMPEHHRHGNLQSVKITGFCSAKSLIELTCYILDNTTSLKCLTLDTTRGVSSCSTGEHKKCFPIGKMLTEANRANQDSSGGYCSRQSVARNACLSMKPHSTPGCVTRGKPYRALNGEVLIPLLLSQHGLSRRSEITGCSTRSTEAGQKWQGQWRKRQRCGGSPILPYRPRL

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g32910 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0506700 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0015850 RBH 0.0 0.000000 0.374413
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0015860 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0016080 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0015850 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0015990 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0328600 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0015850 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0317900 RBH 0.0403415 0.0963395 1.4156705
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0015830 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0015670 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0015760 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0015620 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0015730 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G016130 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0015920 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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