Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_09g0471500 | OGI:09052570 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr09:17968402-17971304 | ||||||||
| Gene Symbol | WAK83, OsWAK83 | ||||||||||
| DNA seq | GAAAATTAACTTGACTTCGTATGATTTGCTTCTTATTCTCATATATGATGAAACATAGTCCCATAAAGACTAAAGGTGTACACAAACAATATTTTTTTATTTTTACACAAAATTTTTTTAATAATGAACATAACTGAGTCTGAATTTCTAGGGTAAGTGAAAACTATGATACAATATGACGCGGTATGATATGGTGATATGATGTATGCTGGGTAGCAAAGAGATTCCAGCTTAACGCCCTGATGCTAGGTCCTTGACAACTTTCTTCTCGATGCTGAAATTTCCTGTACTCGAGGCTCCTGAGCTTATAATGTAAGAAGATTCTCCAAGCAAGCTCTCCAACTCTTCAGGATTTTGTTGCGTCCATGGGTGTTGCATTACCTTAACCAGCCTATCGAGCTTCTCCGCAACTTTCTTCATGGATGGTCTATCCTCACCACACATTGCCAAGCATTGCTTTGCTAAATCTACAACTTCTTCGAGAAACTCCATGTTCTCTTCATTGCTAATTTGATCGTCCAATATATTCTCAAGCTTGTTCTCCTTCATAGCTGAGAGAAACCTCATTGACAAACTTTTCTCATTTCCAGGAGCATCAAGGTTGAAAACGTTCTTCCTTGTGAGCAGTTCTAGAAGAACAACTCCAAAGCTGTAAACGTCACTCTTATCTGTTAATTCACATGTTTGCATATACTCTGGATCAAGGTAACCCCAAGTCCCTTGGACTAGCGTGACAAGCTGTGACTTGTCTAGTGGAGCTAAGATGGAAGCACCAAAGTCGGAGACTTTTGCCATGAAGTTAACATCGAGGAGGATGTTGGAGGACTTGACATCACCATGGATGATGGGTGGTGAAGCGTAGGAGTGGAGGTAGGCTAGTGCCTCAGCTGATTCATGGGCGATCCGTAGACGAGTAACTAGAGAAATGTGTTGGCCATGGTTGCCATGGATGAGATTGGATAGCGTTCCATTTGGGATAAATTCATATACTAGCATAGGAACTTGTACTTCAAGGCAACATCCTAATAGTTTAACAATGTTTATGTGGTTTATTTAGGATAGGATTAGCATTTCTTTACCAAATTCTTTCTTGTGTTGCTCATCCATTGTCATGCATTTCTTGACAGCTATTTTAGTGTTGTCCTTGAGAAGTCCCTTGTAAACAGTGCCATGACCACCATGGCCAAGAATTTGGTTTTTGTCAAACTTGTTTGTAGCATGCTGCAACTCTGCTTCTGAGAAAATTGTAAATGATTTCCTTTCATTTGAATTCATCTCTTGAAACAGCAGTAGACCACCGTGTAGCTTAAAATATTTCTGCTTGATGTGTTGCAGCTTTCTTCTCTCGCGGATCAAGTACGAACAAGTTGCCATGATCACAAGTATGACAAATCCAACACTTGCCCCTGGTTGCCGAATATAAATTTGTCAGCCAATAACAATACTAGGACAAACGACGACTTGACTTAGAAAAGCAAGCGTTGTAGTACGTACCAATGCACTAATAAGATAATCAATATGTAAATATATATATATTAGCAAAGAATATCTACTGCTAGTTGTAGTACGTACCTACAACAGGCATCACCCAAGCTTGGGACTTCTGAATCTTCTGATCTGGAACACAGACACCCCGAGCCAGCTCATTTTGTCCTTGAGGGCAAGAACATTTGTAACTCCCGATTGTATTTTCACAAATTCCAGCGCATGGATAAGTAGTGTTATCAAGACATTCATTGATATCTGAAACAAAGCAAACTTTCGTGAATATAAGTTCTTATTGTATACTTTGCTGAATAGAGAGAGGGAGAGAGAGAGAGAGACAGAGAGACCTCTGCATCCAAGAAGACCGTCCTTGACGTAAGGATTGCCATCGAACCCCTTGGAGCACTTGCAGCGATAACCTCTCCCATTCGTTGAATTGAGGCATTCGCTATTGTTGCTAACACAAGCATATGAACTCATGTTCGTTTTCGCTTCCTCGCATGTCTCCCATGTAATTATCCAGTCCATCACGGCCGGAACAGTCCCGTTGTAGTCATCCCAGAAGTTTGTTGAGGGAATGTAAGTGGTGCTATAGTTCAAAACTAGAAGTCCAGCCACTCACTTACACAGCCTTTTCCATCACTACCACGTAGCCACAACTGCTGTAGCTGATTTCTGAGGAGTTATAGTCTTTATTGAAGTAAGCCTCAAGATAACCCAGGTCTGGCGGGACATCCACCGAACAACAGCCAGCGCCAGAGCAAGAACCATTTTTTGGTTGATCGGAGCATGTGGACAAGCAACCTATGACATACTGCATAAGTCACAGATGTTAATTTGTATCTATGACGTTAAATTAAATGAGATTATGTAACGATCAGTACTGAGCGCCTAGTATATTAATATAAGCAAAATGTCGTCAAAGCATAAATATGAGGAGATACTTACGGAAACACCTCTCATGTAGGCCATTGTATTGCAACCGATGATGAAAATCTTGTTATCCTCGTATGAGAACCTGAAGGGCATGTAGGTGAAGTTTTGGAAATCCACCCATTCCTTCATTTTGCTCGAGGCCGAGTCATAGCACTACCAAGAGATCCGCATCTTCATCCAGGCTTTGGCATCGCGCACAGAGATTTTCGTCACCTCAAACGACCCCTTGAAAGGCCTCTTGGTGCCGTTGACAGGCTTGCAGATGATGTTGAAGCCATGGTGGATTGCGCAGTGATCGCCGATGCCGAAGGGGAACGGGATGTCGACGTCCCCGCACCTCGTCTGGCAGCCTGGGTGTCCAGCCACGGGGACGTCGGCGGCTACCATCCCGATGGCTGAAACGCAGATCAGAAGAATGGTGGAGGGAAGAGGCTTAGTCATTGCGTGTGTGTGTGGAGACTGGAGGAGACAGGAGAGTGTGT
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| CDS seq | ATGACTAAGCCTCTTCCCTCCACCATTCTTCTGATCTGCGTTTCAGCCATCGGGATGGTAGCCGCCGACGTCCCCGTGGCTGGACACCCAGGCTGCCAGACGAGGTGCGGGGACGTCGACATCCCGTTCCCCTTCGGCATCGGCGATCACTGCGCAATCCACCATGGCTTCAACATCATCTGCAAGCCTGTCAACGGCACCAAGAGGCCTTTCAAGGGGTCGTTTGAGGTGACGAAAATCTCTGTGCGCGATGCCAAAGCCTGGATGAAGATGCGGATCTCTTGGTAG |
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| Protein seq | MTKPLPSTILLICVSAIGMVAADVPVAGHPGCQTRCGDVDIPFPFGIGDHCAIHHGFNIICKPVNGTKRPFKGSFEVTKISVRDAKAWMKMRISW |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_09g0471500 | OsNip_09t0471500-01 | Chr09 | 17968402 | 17971304 | - | RAP2018-11-26 | ||
| CDS seq | ATGACTAAGCCTCTTCCCTCCACCATTCTTCTGATCTGCGTTTCAGCCATCGGGATGGTAGCCGCCGACGTCCCCGTGGCTGGACACCCAGGCTGCCAGACGAGGTGCGGGGACGTCGACATCCCGTTCCCCTTCGGCATCGGCGATCACTGCGCAATCCACCATGGCTTCAACATCATCTGCAAGCCTGTCAACGGCACCAAGAGGCCTTTCAAGGGGTCGTTTGAGGTGACGAAAATCTCTGTGCGCGATGCCAAAGCCTGGATGAAGATGCGGATCTCTTGGTAG
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| Protein seq | MTKPLPSTILLICVSAIGMVAADVPVAGHPGCQTRCGDVDIPFPFGIGDHCAIHHGFNIICKPVNGTKRPFKGSFEVTKISVRDAKAWMKMRISW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.093793 | 0.272895 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g29560 | SBH | 0.0 | 0.106810 | 0.065060 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0471500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0013650 | SBH | 0.0 | 6.404607 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0013600 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0013860 | SBH | 0.0 | 0.494785 | 0.090946 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013660 | RBH | 0.000000 | 0.059288 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0013790 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0300800 | SBH | 0.015003 | 0.270505 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0013690 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0290800 | SBH | 0.4039655 | 1.277264 | 1.4154025 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0013680 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0013490 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0013580 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0013450 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0013510 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G013960 | RBH | 0.159791 | 1.844438 | 0.178197 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0013740 | RBH | 0.086221 | 1.981473 | 0.393440 |
