Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_09g0471400 | OGI:09052570 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr09:17961284-17962785 | ||||||||
| Gene Symbol | WAK81, OsWAK81, OsRLCK273, RLCK273, WAK84, OsWAK84 | ||||||||||
| DNA seq | GAAACAACAACCTCACCTTTGGATCTTAACAATGATGCAACCTTGAGCTACACATATAAAACATGTATGAATCATTCCATATATGATGACGATTACCTATACATGTAATACTTTTGGAGTATACCTATATAATTTCCTGGGATATGATATACAACAAGGTTATTAGCGATTATCTTCCTGATTCTAGGCCTATTAAAGATTTCTTCTCAATGCTGAAATTTCCCGTACTGACAACCTCCGAGCTAACAATTGATGACTCTCCTAGTAAGCTCTCCGCCTCTTCAAGATTGTGCAGTGCCCAAGGATGGTGCAAAACCTTTCTCAAGCTATCAAGCTTTTCTGCAACTTCCTTCATTGATGGCCTATTCTCACCACACATTTCCAAGCATCGTCTGGCCAACTCAGCAATCTCTTCAAGAATCTCCATATTCTCCTCGCTCTTAATTTGATCATCCAAGATTTCCTCAAGCTTGTTCTCCTTGACAGCAGAAAGGAACCTCACAGATAGGCTTTTCTCATCCTCTAGCCCGTCAAAATTTAATGGTTTCTTTCTCGTGAGTAGCTCTAGGACAACAACCCCAAAACTGTATACATCACTCTTATCCGTTAATTTCCATGTTTGCATGTACTCTGGGTCAAGGTACCCACGAGTTCCCTGCACAAACGTGACGAACTGTGCATCATCGGTTGGCGATAAGATGGAGGCTCCAAAGTCAGAGACCTTCGCTGTGAAGTCACCATCAAGGAGAATGTTGGATGACTTGACGTCCCCGTGGAGGATTGGAGGCGATGCCCATGAGTGAAGGTAGGCCAATGCTTCAGCAGACTGGTGAGCAATCTGTAAACGCGTGGATATAGAGATGTGCCTGCCGTGGCCATCATGAATGAGATGGAACAGTGTGCCATTTGCGATAAACTCATACACCAATATTGGGACTTCCACTTCAAGGCAACAACCTAATAGTTTGACAATATTTTTGTGGTTGACTTGGGATAAGATTACCATTTCTTTACCAAATTCTTTCTTTTGTTGCTCATCGATTGTCTTGCATCTTTTGATTGCTACTTCAGTGTTGCCGTTTAGAAATCCCTTGTAAACGGTGCCATGTCCTCCATGACCTAGGATTTTCTTTTCATCGAAATTATTAGTGGCTTTCTGCAATTCTTCTTCCGTAAAGATTTTAAATGCAGTACCCTTCATCTCCTCAAATAGCAGTCGACCTCCATGCTGTCGAAAGTACTTCTGTTTTATGCTGTGTAGCTTATTTCTTTCTTGGATGAGATATGCACACGTCACAATAGTCACAAGGGTGACAACTCCAATACTTCCACCTGCATGGTTTCCAAAGTGATGTTACTCCAAAATGATGATTTGAAAGCATTTCCGGGGTTTTCAACCTTAAATTTTAATGAACATGAATAATATGATTGATTCCTACTATATGTTCAGATTGGTTTTACTGTAATGCGCTATTATGTTCAAGATTGGTGTCAATGTACAA
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| CDS seq | CATCACTTTGGAAACCATGCAGGTGGAAGTATTGGAGTTGTCACCCTTGTGACTATTGTGACGTGTGCATATCTCATCCAAGAAAGAAATAAGCTACACAGCATAAAACAGAAGTACTTTCGACAGCATGGAGGTCGACTGCTATTTGAGGAGATGAAGGGTACTGCATTTAAAATCTTTACGGAAGAAGAATTGCAGAAAGCCACTAATAATTTCGATGAAAAGAAAATCCTAGGTCATGGAGGACATGGCACCGTTTACAAGGGATTTCTAAACGGCAACACTGAAGTAGCAATCAAAAGATGCAAGACAATCGATGAGCAACAAAAGAAAGAATTTGGTAAAGAAATGGTAATCTTATCCCAAGTCAACCACAAAAATATTGTCAAACTATTAGGTTGTTGCCTTGAAGTGGAAGTCCCAATATTGGTGTATGAGTTTATCGCAAATGGCACACTGTTCCATCTCATTCATGATGGCCACGGCAGGCACATCTCTATATCCACGCGTTTACAGATTGCTCACCAGTCTGCTGAAGCATTGGCCTACCTTCACTCATGGGCATCGCCTCCAATCCTCCACGGGGACGTCAAGTCATCCAACATTCTCCTTGATGGTGACTTCACAGCGAAGGTCTCTGACTTTGGAGCCTCCATCTTATCGCCAACCGATGATGCACAGTTCGTCACGTTTGTGCAGGGAACTCGTGGGTACCTTGACCCAGAGTACATGCAAACATGGAAATTAACGGATAAGAGTGATGTATACAGTTTTGGGGTTGTTGTCCTAGAGCTACTCACGAGAAAGAAACCATTAAATTTTGACGGGCTAGAGGATGAGAAAAGCCTATCTGTGAGGTTCCTTTCTGCTGTCAAGGAGAACAAGCTTGAGGAAATCTTGGATGATCAAATTAAGAGCGAGGAGAATATGGAGATTCTTGAAGAGATTGCTGAGTTGGCCAGACGATGCTTGGAAATGTGTGGTGAGAATAGGCCATCAATGAAGGAAGTTGCAGAAAAGCTTGATAGCTTGAGAAAGGTTTTGCACCATCCTTGGGCACTGCACAATCTTGAAGAGGCGGAGAGCTTACTAGGAGAGTCATCAATTGTTAGCTCGGAGGTTGTCAGTACGGGAAATTTCAGCATTGAGAAGAAATCTTTAATAGGCCTAGAATCAGGAAGATAA
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| Protein seq | HHFGNHAGGSIGVVTLVTIVTCAYLIQERNKLHSIKQKYFRQHGGRLLFEEMKGTAFKIFTEEELQKATNNFDEKKILGHGGHGTVYKGFLNGNTEVAIKRCKTIDEQQKKEFGKEMVILSQVNHKNIVKLLGCCLEVEVPILVYEFIANGTLFHLIHDGHGRHISISTRLQIAHQSAEALAYLHSWASPPILHGDVKSSNILLDGDFTAKVSDFGASILSPTDDAQFVTFVQGTRGYLDPEYMQTWKLTDKSDVYSFGVVVLELLTRKKPLNFDGLEDEKSLSVRFLSAVKENKLEEILDDQIKSEENMEILEEIAELARRCLEMCGENRPSMKEVAEKLDSLRKVLHHPWALHNLEEAESLLGESSIVSSEVVSTGNFSIEKKSLIGLESGR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_09g0471400 | OsNip_09t0471400-01 | Chr09 | 17961284 | 17962785 | - | RAP2018-11-26 | ||
| CDS seq | CATCACTTTGGAAACCATGCAGGTGGAAGTATTGGAGTTGTCACCCTTGTGACTATTGTGACGTGTGCATATCTCATCCAAGAAAGAAATAAGCTACACAGCATAAAACAGAAGTACTTTCGACAGCATGGAGGTCGACTGCTATTTGAGGAGATGAAGGGTACTGCATTTAAAATCTTTACGGAAGAAGAATTGCAGAAAGCCACTAATAATTTCGATGAAAAGAAAATCCTAGGTCATGGAGGACATGGCACCGTTTACAAGGGATTTCTAAACGGCAACACTGAAGTAGCAATCAAAAGATGCAAGACAATCGATGAGCAACAAAAGAAAGAATTTGGTAAAGAAATGGTAATCTTATCCCAAGTCAACCACAAAAATATTGTCAAACTATTAGGTTGTTGCCTTGAAGTGGAAGTCCCAATATTGGTGTATGAGTTTATCGCAAATGGCACACTGTTCCATCTCATTCATGATGGCCACGGCAGGCACATCTCTATATCCACGCGTTTACAGATTGCTCACCAGTCTGCTGAAGCATTGGCCTACCTTCACTCATGGGCATCGCCTCCAATCCTCCACGGGGACGTCAAGTCATCCAACATTCTCCTTGATGGTGACTTCACAGCGAAGGTCTCTGACTTTGGAGCCTCCATCTTATCGCCAACCGATGATGCACAGTTCGTCACGTTTGTGCAGGGAACTCGTGGGTACCTTGACCCAGAGTACATGCAAACATGGAAATTAACGGATAAGAGTGATGTATACAGTTTTGGGGTTGTTGTCCTAGAGCTACTCACGAGAAAGAAACCATTAAATTTTGACGGGCTAGAGGATGAGAAAAGCCTATCTGTGAGGTTCCTTTCTGCTGTCAAGGAGAACAAGCTTGAGGAAATCTTGGATGATCAAATTAAGAGCGAGGAGAATATGGAGATTCTTGAAGAGATTGCTGAGTTGGCCAGACGATGCTTGGAAATGTGTGGTGAGAATAGGCCATCAATGAAGGAAGTTGCAGAAAAGCTTGATAGCTTGAGAAAGGTTTTGCACCATCCTTGGGCACTGCACAATCTTGAAGAGGCGGAGAGCTTACTAGGAGAGTCATCAATTGTTAGCTCGGAGGTTGTCAGTACGGGAAATTTCAGCATTGAGAAGAAATCTTTAATAGGCCTAGAATCAGGAAGATAA
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| Protein seq | HHFGNHAGGSIGVVTLVTIVTCAYLIQERNKLHSIKQKYFRQHGGRLLFEEMKGTAFKIFTEEELQKATNNFDEKKILGHGGHGTVYKGFLNGNTEVAIKRCKTIDEQQKKEFGKEMVILSQVNHKNIVKLLGCCLEVEVPILVYEFIANGTLFHLIHDGHGRHISISTRLQIAHQSAEALAYLHSWASPPILHGDVKSSNILLDGDFTAKVSDFGASILSPTDDAQFVTFVQGTRGYLDPEYMQTWKLTDKSDVYSFGVVVLELLTRKKPLNFDGLEDEKSLSVRFLSAVKENKLEEILDDQIKSEENMEILEEIAELARRCLEMCGENRPSMKEVAEKLDSLRKVLHHPWALHNLEEAESLLGESSIVSSEVVSTGNFSIEKKSLIGLESGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.993036 | 0.897883 | 1.658847 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g29520 | RBH | 0.623783 | 0.560952 | 0.427476 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0471400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0013630 | RBH | 0.0 | 0.630383 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0013580 | RBH | 0.032999 | 0.000000 | 0.325910 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0013840 | RBH | 0.107822 | 0.0 | 0.932630 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013660 | SBH | 0.000000 | 0.059288 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0013780 | RBH | 1.859385 | 1.203152 | 2.170683 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0300700 | RBH | 1.0873545 | 1.356895 | 2.6636495 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0013680 | RBH | 0.038502 | 0.000000 | 0.173599 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0290800 | SBH | 0.4039655 | 1.277264 | 1.4154025 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0013670 | RBH | 0.221010 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0013480 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0013570 | RBH | 1.303694 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0013440 | RBH | 0.137225 | 0.0 | 0.220161 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0013500 | RBH | 0.105747 | 2.205363 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G013960 | SBH | 0.159791 | 1.844438 | 0.178197 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0013740 | SBH | 0.086221 | 1.981473 | 0.393440 |
