Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_09g0447500 | OGI:09048820 | 6/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr09:16718633-16720923 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GCACAAATCTTGGTACTCATTTGTTTATTAGTAGTAGTCAACAACCAATGATTTTCAGTTCGAGAGGAGTTGGGCTCATGGGTTGTGGGCAGTGGGCTGGCAGGCCGGCTCGTTTACATGAACATTTTACACCTTGGTTGATATCATTATCCATCCTAAAATACCGAACAGACATAAACGATCGACTAACAAAGGAAACTAACAAATATAAACACGATAGATGAACAGAAATGAAATACCCTAACGGCCTTGTTCGGATGGGCCTAAATCCCAGCCCACTCATATAGATGGGCCGGTATTCAGGCCCATCAAATTTTGTAGGCCTTGGGCCTTCCTAAACCTTAACCGGCACGGCCCAAAGAGGGGTAGCGAGCTCAAGCACGGCGCCGAACCGGTCGCCGACGTCGACGTCGCCAGGCGCCATCCCCTCCGGCAGCCTCCACTCCAGCGAGTGCACCATCGCCGCCACCACCATGGGCACCACCGCCACGGCCAGCGGTATCCCGGGGCACGCCCTCCGGCCGGACCCGAACGGGATGAACTCGAGCGTCCTCCCCCAGTAGTCCGCCTCCCTGCCCAAGAACCTCTCCGGCGAGAACGCATCCGGCTCCGGCGACCACGCCGCGGGGTCCCTCCCGATCGCCCACGCGTTGATCAGCACGCGGGCGCCGCTGGGCACCGAGTAGCCGCCGAGCGTCACGCCGCCGGCCGGCTCCGAGTCCGACGACACCCGGTGCGGCAGCAGCAGCGGCGCCGGCGGGTGCAGCCGCAGCGTCTCCTTGATCACGGCGTTGAGGTAGGGGAGCCTCGCGAGCTCGCCTTCCTCGACGGCGCCGCGCCCGAACGCCTCCCCGAGCTCGGCGCGCGCCTTCGCCATCTTGCTCGGGTTGCGGAGCAGCTCGGCCATCGCCCACTCCACCGTGGTCGTCGTCGTGTGGCTCCCAGCGATGAACAAATCCTGATTAAATTATTCACATCAAGTCTAATCATGAGCATTTTTAATTCTCACATCGAGTCAAATTATTTTAACTAAGGGCCGCGAAATGAAAATTTTTAAGTATCATATCATATGTTTGATCAGATGTCGGATGGAGTTTTTGGACAAAAATGAAAAAACTAATTTCATAACTCACCTGGAAAACCGCGAGACAAATCTTTTGAGACTAATTAATCCATCATTAGCATATATTGATTATTGTAGCACTTATAGCTAATCATAGACTAATTAAGCTCAAAAGATTCGTCTCGCGATTTTCCTCTAACTGTATATTTTTTTTTCTTTTAATCTATATTTAATGCTCCATGCATGTATTTAAAAATTCGATATGATATTTTTGGAAAAAACTTTTGGGTACTAAACGGGGCCTAATTAAAGAATATGAGATACCGTCATGAGAGCTCGAATCAGTGGGCGCTCGAGCTGTGACTTGGCGTGGAGCTCCAGAAGCGAGTCGAGCAGGTCGCCGGGTTTCTCGCCGCTGCTCAGCCGCCGGTCAATGACATCGTCGAAGAAATCGTAGAACTTCTTGAGGTTCTTGGCCGCCGCGCGGCGGCGACGGCTGAGGTCGAGCGCGCTGAGGAATGGGAAGAAGTCGGAGATGTTGGGCTTGGCCGTCTCCGCCACGGAGTCGGCGATGAGCTGCTGGAACTCCTGCCCGGTCTCCGACCCCAGCTCGACGACGTCCTCGGAGAAGAAGACGTTGGACATGAAGTTGAGCACGGAGCCGAACACGGCGAGGCCGACGCGGACGGGGCGCCCCGAGCGCGCGCCGAGGTAGTCGACGAGCTCCCGGGCCTTGCGCTCCCGGATGCCGCGGCTGGCGCCGAGACGCCGGGAGGTGAACAGCAGGGTGCTCGCCAAGGTGCGCATGTGCTTCCACAGCGGGCTGGAGCTCGGCAGCCACGCCATGGAGACGTCCTGGTGGCCGAGCACGTTGGCGTTGTCCGGCACCCACCGGGAGGAGATGGCGCCGTCCTTCTTGTGGAGCGCCTCGTGCGCCACGTCCGGGGACGAGAGCACGACGGTGCTCGCCATGCCGAGCCTCAGCGACATGACGGGGCCGTACGACGCCGCTAAGCCGGTGAGCGCGCGGTGCAGCTCGCCGCCACGGAGGAGGTCGGGGATGTTGCCGATGACCGGGAACGGCGTCGGGCCCGGCGGAGGCGGCGGTGCAGCAGGCGCGCCGGAGGGGGACTTGCTTGCCTTGCTCCATAGCAGGTACAGCAATGGAACGCCAAGAAGTGAGATCAGGAACACTGGCGAGATCGTCGTCAACTCCATTAGTGCACAC
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| CDS seq | ATGGAGTTGACGACGATCTCGCCAGTGTTCCTGATCTCACTTCTTGGCGTTCCATTGCTGTACCTGCTATGGAGCAAGGCAAGCAAGTCCCCCTCCGGCGCGCCTGCTGCACCGCCGCCTCCGCCGGGCCCGACGCCGTTCCCGGTCATCGGCAACATCCCCGACCTCCTCCGTGGCGGCGAGCTGCACCGCGCGCTCACCGGCTTAGCGGCGTCGTACGGCCCCGTCATGTCGCTGAGGCTCGGCATGGCGAGCACCGTCGTGCTCTCGTCCCCGGACGTGGCGCACGAGGCGCTCCACAAGAAGGACGGCGCCATCTCCTCCCGGTGGGTGCCGGACAACGCCAACGTGCTCGGCCACCAGGACGTCTCCATGGCGTGGCTGCCGAGCTCCAGCCCGCTGTGGAAGCACATGCGCACCTTGGCGAGCACCCTGCTGTTCACCTCCCGGCGTCTCGGCGCCAGCCGCGGCATCCGGGAGCGCAAGGCCCGGGAGCTCGTCGACTACCTCGGCGCGCGCTCGGGGCGCCCCGTCCGCGTCGGCCTCGCCGTGTTCGGCTCCGTGCTCAACTTCATGTCCAACGTCTTCTTCTCCGAGGACGTCGTCGAGCTGGGGTCGGAGACCGGGCAGGAGTTCCAGCAGCTCATCGCCGACTCCGTGGCGGAGACGGCCAAGCCCAACATCTCCGACTTCTTCCCATTCCTCAGCGCGCTCGACCTCAGCCGTCGCCGCCGCGCGGCGGCCAAGAACCTCAAGAAGTTCTACGATTTCTTCGACGATGTCATTGACCGGCGGCTGAGCAGCGGCGAGAAACCCGGCGACCTGCTCGACTCGCTTCTGGAGCTCCACGCCAAGTCACAGCTCGAGCGCCCACTGATTCGAGCTCTCATGACGGATTTGTTCATCGCTGGGAGCCACACGACGACGACCACGGTGGAGTGGGCGATGGCCGAGCTGCTCCGCAACCCGAGCAAGATGGCGAAGGCGCGCGCCGAGCTCGGGGAGGCGTTCGGGCGCGGCGCCGTCGAGGAAGGCGAGCTCGCGAGGCTCCCCTACCTCAACGCCGTGATCAAGGAGACGCTGCGGCTGCACCCGCCGGCGCCGCTGCTGCTGCCGCACCGGGTGTCGTCGGACTCGGAGCCGGCCGGCGGCGTGACGCTCGGCGGCTACTCGGTGCCCAGCGGCGCCCGCGTGCTGATCAACGCGTGGGCGATCGGGAGGGACCCCGCGGCGTGGTCGCCGGAGCCGGATGCGTTCTCGCCGGAGAGGTTCTTGGGCAGGGAGGCGGACTACTGGGGGAGGACGCTCGAGTTCATCCCGTTCGGGTCCGGCCGGAGGGCGTGCCCCGGGATACCGCTGGCCGTGGCGGTGGTGCCCATGGTGGTGGCGGCGATGGTGCACTCGCTGGAGTGGAGGCTGCCGGAGGGGATGGCGCCTGGCGACGTCGACGTCGGCGACCGGTTCGGCGCCGTGCTTGAGCTCGCTACCCCTCTTTGGGCCGTGCCGGTTAAGGTTTAG
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| Protein seq | MELTTISPVFLISLLGVPLLYLLWSKASKSPSGAPAAPPPPPGPTPFPVIGNIPDLLRGGELHRALTGLAASYGPVMSLRLGMASTVVLSSPDVAHEALHKKDGAISSRWVPDNANVLGHQDVSMAWLPSSSPLWKHMRTLASTLLFTSRRLGASRGIRERKARELVDYLGARSGRPVRVGLAVFGSVLNFMSNVFFSEDVVELGSETGQEFQQLIADSVAETAKPNISDFFPFLSALDLSRRRRAAAKNLKKFYDFFDDVIDRRLSSGEKPGDLLDSLLELHAKSQLERPLIRALMTDLFIAGSHTTTTTVEWAMAELLRNPSKMAKARAELGEAFGRGAVEEGELARLPYLNAVIKETLRLHPPAPLLLPHRVSSDSEPAGGVTLGGYSVPSGARVLINAWAIGRDPAAWSPEPDAFSPERFLGREADYWGRTLEFIPFGSGRRACPGIPLAVAVVPMVVAAMVHSLEWRLPEGMAPGDVDVGDRFGAVLELATPLWAVPVKV |
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| Function | Cytochrome P450 76M5 [UniProtKB/Swiss-Prot:Q6YTF5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_09g0447500 | OsNip_09t0447500-01 | Chr09 | 16718633 | 16720923 | - | RAP2018-11-26 | ||
| CDS seq | ATGGAGTTGACGACGATCTCGCCAGTGTTCCTGATCTCACTTCTTGGCGTTCCATTGCTGTACCTGCTATGGAGCAAGGCAAGCAAGTCCCCCTCCGGCGCGCCTGCTGCACCGCCGCCTCCGCCGGGCCCGACGCCGTTCCCGGTCATCGGCAACATCCCCGACCTCCTCCGTGGCGGCGAGCTGCACCGCGCGCTCACCGGCTTAGCGGCGTCGTACGGCCCCGTCATGTCGCTGAGGCTCGGCATGGCGAGCACCGTCGTGCTCTCGTCCCCGGACGTGGCGCACGAGGCGCTCCACAAGAAGGACGGCGCCATCTCCTCCCGGTGGGTGCCGGACAACGCCAACGTGCTCGGCCACCAGGACGTCTCCATGGCGTGGCTGCCGAGCTCCAGCCCGCTGTGGAAGCACATGCGCACCTTGGCGAGCACCCTGCTGTTCACCTCCCGGCGTCTCGGCGCCAGCCGCGGCATCCGGGAGCGCAAGGCCCGGGAGCTCGTCGACTACCTCGGCGCGCGCTCGGGGCGCCCCGTCCGCGTCGGCCTCGCCGTGTTCGGCTCCGTGCTCAACTTCATGTCCAACGTCTTCTTCTCCGAGGACGTCGTCGAGCTGGGGTCGGAGACCGGGCAGGAGTTCCAGCAGCTCATCGCCGACTCCGTGGCGGAGACGGCCAAGCCCAACATCTCCGACTTCTTCCCATTCCTCAGCGCGCTCGACCTCAGCCGTCGCCGCCGCGCGGCGGCCAAGAACCTCAAGAAGTTCTACGATTTCTTCGACGATGTCATTGACCGGCGGCTGAGCAGCGGCGAGAAACCCGGCGACCTGCTCGACTCGCTTCTGGAGCTCCACGCCAAGTCACAGCTCGAGCGCCCACTGATTCGAGCTCTCATGACGGATTTGTTCATCGCTGGGAGCCACACGACGACGACCACGGTGGAGTGGGCGATGGCCGAGCTGCTCCGCAACCCGAGCAAGATGGCGAAGGCGCGCGCCGAGCTCGGGGAGGCGTTCGGGCGCGGCGCCGTCGAGGAAGGCGAGCTCGCGAGGCTCCCCTACCTCAACGCCGTGATCAAGGAGACGCTGCGGCTGCACCCGCCGGCGCCGCTGCTGCTGCCGCACCGGGTGTCGTCGGACTCGGAGCCGGCCGGCGGCGTGACGCTCGGCGGCTACTCGGTGCCCAGCGGCGCCCGCGTGCTGATCAACGCGTGGGCGATCGGGAGGGACCCCGCGGCGTGGTCGCCGGAGCCGGATGCGTTCTCGCCGGAGAGGTTCTTGGGCAGGGAGGCGGACTACTGGGGGAGGACGCTCGAGTTCATCCCGTTCGGGTCCGGCCGGAGGGCGTGCCCCGGGATACCGCTGGCCGTGGCGGTGGTGCCCATGGTGGTGGCGGCGATGGTGCACTCGCTGGAGTGGAGGCTGCCGGAGGGGATGGCGCCTGGCGACGTCGACGTCGGCGACCGGTTCGGCGCCGTGCTTGAGCTCGCTACCCCTCTTTGGGCCGTGCCGGTTAAGGTTTAG
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| Protein seq | MELTTISPVFLISLLGVPLLYLLWSKASKSPSGAPAAPPPPPGPTPFPVIGNIPDLLRGGELHRALTGLAASYGPVMSLRLGMASTVVLSSPDVAHEALHKKDGAISSRWVPDNANVLGHQDVSMAWLPSSSPLWKHMRTLASTLLFTSRRLGASRGIRERKARELVDYLGARSGRPVRVGLAVFGSVLNFMSNVFFSEDVVELGSETGQEFQQLIADSVAETAKPNISDFFPFLSALDLSRRRRAAAKNLKKFYDFFDDVIDRRLSSGEKPGDLLDSLLELHAKSQLERPLIRALMTDLFIAGSHTTTTTVEWAMAELLRNPSKMAKARAELGEAFGRGAVEEGELARLPYLNAVIKETLRLHPPAPLLLPHRVSSDSEPAGGVTLGGYSVPSGARVLINAWAIGRDPAAWSPEPDAFSPERFLGREADYWGRTLEFIPFGSGRRACPGIPLAVAVVPMVVAAMVHSLEWRLPEGMAPGDVDVGDRFGAVLELATPLWAVPVKV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0465700 | SBH | 2.850025 | 2.351447 | 0.705339 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g27510 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0447500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0012250 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0012150 | RBH | 0.000000 | 1.205210 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0012450 | RBH | 0.0 | 2.355050 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0012210 | RBH | 0.0 | 0.043755 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0012320 | RBH | 0.0 | 2.235011 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0277200 | RBH | 0.0061475 | 5.612604 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0012280 | SBH | 0.062625 | 0.714029 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0266700 | RBH | 0 | 5.423729 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0012250 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0012030 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0012140 | SBH | 0.0 | 2.982583 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0012000 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0012050 | RBH | 0.0 | 8.995354 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G012560 | RBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0012340 | RBH | 0.479874 | 35.097515 | 0.0 |
