Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_09g0365000 | OGI:09035460 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr09:11990015-11993428 | ||||||||
| Gene Symbol | VQ34, OsVQ34 | ||||||||||
| DNA seq | TTAGCCTCTCTGAAACGGCTGCTCCAGCTCTCTCAGCTTTGGGCAATGCCTGATATCAACACTCTCCACCCTAGCAATGGATTCTTCTCCTCCGATGGAGCTCAGCTCCTGGCAGCAGAAGATCTTCAGCCTCTGGAGAGACGGCATTTCGCTCCATATCTCACCGCCGATGCACTCCACCCCGGAGCAAAACTGCAACTCCAAGCTCACGAGCACAGGGAGTTCACGCAGGCCGCATCGGAGAACTGAATCCGTGAGCTCTCCGCAAGCTTCCAGCTTGAGCGATTTCAGGGATCTGGGCAGGGTCAGGCCTTGCTCCCAGCTCAGGCTCCAGCAGTGGGACACCTCCAGATCCTCCAGGTGAGTGAATTTGATGAGCTGATTCGTCGGCAATGATGCTAACTCCTCGCAGTTGGAGATCCGTATCACCTTGATTTCAGGTAGAAGCTCTGGCTGCAGGAGATTGTCGAGGCTCATTAGCTTTCTGCACCAGGTGACGCTCAGCTTGGTGAGTGATCTGAACACTACAGGTGAGCTGCCTCTGCTGCTGCTCCCCGTCACGGTGATGAACAGGCTCGCTATGTTAGGGCAGGAGCTGATCGAGAGCGATTCCAACCTGCTACTGATTGGCTCATCGTCGAGGAGCCAACTTGGATGAAATCCGGAGCCCATGTAGAACCTCACTTCCAGATTCTTGATGCTGGGGCTAGGGCGTAGGCTTTCGAGCACCTCCATCTCCTGTTCGCCGTTGTGTTTGTCAGGCCTGATCGAGTCATGCCATGAAAGAGTCAATGTGTTGAGATGGGTTTTCTTGTCTAGATCAGCCTCAACTGCTTGCTCCTTGCTTGTGACATTGTGAAGGCCACTGATCTCTAGTGCACCTCGGAGATTGTTCAGGTTCTTCAGCTCTTGAATTCCCCTTCCTGGTGTATCATCAACAGCATAGTAAGGCATATCTTGAAGATAGATAAGATTGCCTACTCCAGGCACATGTCCGAGCTGGTTGTTAAGATCACTCCTCAGTCTAGCCTTCCTCAATTTCACGAGCTTGACAATGTCCTTGGGAACACTATCAAATCTGCAGTTTTGAGCATCCAGGATTTCCAGATTACGAAGACGCCAAAAAGAATCAGGAAGTGCCTCGAAGTCACAGGAGGAAATGTCGAGATAGCGAAGAAGTATCAGGTTACCAACATTCCCCAGTAGCTCCTTCAGCCGGCATGATATGAACCTCAGCATCCGGATGTTAGTGAGATGACAGAACCATGTTTCAAGTACAGAAGTAGTAATGACATCAGAGTCAATGCTAATGCAAACAACTGACCGCAATGTCTTGTACTTGTGCAGGCTTTCTAAATCGCTGCTACTAAGACCACTAAAGTGGAGTATTGACACATGACGAACTTTGGGAGGTATTCTCAACAAGTCACTGCTGTCTTTAATCACAAAGCATTCGTTTGTTGAAATTTTCTGCGCAGTTTCATACAGCAAACCTTGCATGACATATGCATGCCGAGAACTGGAAGATGTTGGAGATATCTGAAAGAAGGATCGTCTCACAAGCTGATCAAAGTACTCATGGCCGATATCTACAGCAGGCACGCTTCCATTGGACACAACTAATCCCACTGCTACCCAGCTATCCACAAGTGTCTCTGCATCAAATTCATGACTCTTGGGGTACATAGAACAGAAGGAGAAGCATCGTTTCAAATGGAAGGGGAGATATTGGTAGCTCAAGTGAAGGGCTGGCCAGATTCTGGTTTCCTTGTGATGGCCCAACTCCCACAACTCACTTTCCAATATACTCTTCCAGTATACAGCATCCAGTTTCAAGTTCAGTAGACATCCAACAATTTTAGCACCAAGAGGAGAACCATTTAGCCTTGCAGCTATTTTTCTGCCAATACACTCAACCTCTTGATCACTGTCAGAAATCGGTAAATCAAATGCATGCATGCTAAACAAATGCCAATTAATTTCATTGGGTAAACCTTCCAATTGCAAGCAGACTGAACTAATATGTTCAGCAACCTTCATCGATCTTGTGGTCACCAAAACCATACTTCCTGGACTGGCACATTTTAGGGGGGCAAGAAACCTTTCCCATCCAAGGTAATATTCTTGGCATACATCCTCCTGCAAATCATCAAGCACAAGCAACAGCCTCCTTGAGTGATGAATCATGCCATTAGTTAGAACTCTCTGGAGACAAATTAGATCATCAGATTTCATTTCGCTTTCGGCAATAGCCCATGCTAACCTCTTAATCAGCTTCTTGTCATCAAAGCCATCTGAGACACATATCCAAACAAGAAGATCAAAATGATCCTGAACTTTCTGATCATTGAAAGAACAATGAGCCAGGGCAGTCTTCCCGATACCACCATCTCCTACTATTGTCAAAACGGACAGATTCTTCTGTCCAGCTCGACCACTGCTGGGCACCTCAGAGACTTGCTCGCTGGTCAGACTGTTCTTGTCCAAAATAAATGAATCAATCAACACCTGCAACTCTTCCTGATAGCCAAAGTTTGTTCTGTCGTACATGAGATTGCCGTATTTCTGGCTGACCGATTCAAAAATAAAATGCTGTGGTTGCATGTCATGCAAGCCCAAATGCCCCATTTGTTCTTTGAGAGAATTGAGCTTTCCATGGATTTCCGTCATCTTGATGTCAGAAAACTCTGGGCATGAAGATCTATTCGCACTGAACCCAACTCCGTCCTGGAGCTCATAGTAATTGAGCTCGTCCAAGAGATCTTCAGCACAGTACACTGTATCCTTGGCTTCTTGGAGGAGATTAGCAATGGAATAATCCTTGCGAACCCAACACTCCGCGAGCTTAATAAGTTCGTACATACCACGGAGAGTGTTCTCGAGCACAAACCGTTCATCCTGTTTCGATGAGTTGAAACCGGGTGAATGAAATTCGTCCGGCGTCCATGTGACGAAGCTGGATGAATGCGGAAGTGCGCTGGGATCACGAGTCTGCTGCATGGTGCTGTTCTGCGCCGAAGCCGTGGGGAGCTTCTGCGCGATGGGGCGGAGGAGGTACGGCGGCAGCGAGGATGCCGGATCGCCGGCGGCGGCGGAGCGGAGGGCGGACGCCGGCGAGGGGAAGAGGTGGTCGAAGCGCGTGCGGAGCGAGGCGGCGGGTGCCCCGACGCCCGCGACGAACGGCGGCGAGGGGATCCCGGTGAACTCCTGCACCATGGCGCGGAAGTTGGAGGGGTCGGTGGTCACCGTCCGCCACGACGCCCTCGTCCGCTTCCTCGACCTCCTCGCCGTCGCCGGCGCCGCGGCCACTGCCGCCCCCGCCCCCTCCACCCCACCACCACCTCCCCGCGAATCGAACTCGTCGTCGCCGCCGCTCGACGACTGGAGACTCCCTCCAATATTACCAGAATCCAT
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| CDS seq | ATGGATTCTGGTAATATTGGAGGGAGTCTCCAGTCGTCGAGCGGCGGCGACGACGAGTTCGATTCGCGGGGAGGTGGTGGTGGGGTGGAGGGGGCGGGGGCGGCAGTGGCCGCGGCGCCGGCGACGGCGAGGAGGTCGAGGAAGCGGACGAGGGCGTCGTGGCGGACGGTGACCACCGACCCCTCCAACTTCCGCGCCATGGTGCAGGAGTTCACCGGGATCCCCTCGCCGCCGTTCGTCGCGGGCGTCGGGGCACCCGCCGCCTCGCTCCGCACGCGCTTCGACCACCTCTTCCCCTCGCCGGCGTCCGCCCTCCGCTCCGCCGCCGCCGGCGATCCGGCATCCTCGCTGCCGCCGTACCTCCTCCGCCCCATCGCGCAGAAGCTCCCCACGGCTTCGGCGCAGAACAGCACCATGCAGCAGACTCGTGATCCCAGCGCACTTCCGCATTCATCCAGCTTCGTCACATGGACGCCGGACGAATTTCATTCACCCGGTTTCAACTCATCGAAACAGGATGAACGGTTTGTGCTCGAGAACACTCTCCGTGGTATGTACGAACTTATTAAGCTCGCGGAGTGTTGGGTTCGCAAGGATTATTCCATTGCTAATCTCCTCCAAGAAGCCAAGGATACAGTGTACTGTGCTGAAGATCTCTTGGACGAGCTCAATTACTATGAGCTCCAGGACGGAGTTGGGTTCAGTGCGAATAGATCTTCATGCCCAGAGTTTTCTGACATCAAGATGACGGAAATCCATGGAAAGCTCAATTCTCTCAAAGAACAAATGGGGCATTTGGGCTTGCATGACATGCAACCACAGCATTTTATTTTTGAATCGGTCAGCCAGAAATACGGCAATCTCATGTACGACAGAACAAACTTTGGCTATCAGGAAGAGTTGCAGGTGTTGATTGATTCATTTATTTTGGACAAGAACAGTCTGACCAGCGAGCAAGTCTCTGAGGTGCCCAGCAGTGGTCGAGCTGGACAGAAGAATCTGTCCGTTTTGACAATAGTAGGAGATGGTGGTATCGGGAAGACTGCCCTGGCTCATTGTTCTTTCAATGATCAGAAAGTTCAGGATCATTTTGATCTTCTTGTTTGGATATGTGTCTCAGATGGCTTTGATGACAAGAAGCTGATTAAGAGGTTAGCATGGGCTATTGCCGAAAGCGAAATGAAATCTGATGATCTAATTTGTCTCCAGAGAGTTCTAACTAATGGCATGATTCATCACTCAAGGAGGCTGTTGCTTGTGCTTGATGATTTGCAGGAGGATGTATGCCAAGAATATTACCTTGGATGGGAAAGTGATCAAGAGGTTGAGTGTATTGGCAGAAAAATAGCTGCAAGGCTAAATGGTTCTCCTCTTGGTGCTAAAATTGTTGGATGTCTACTGAACTTGAAACTGGATGCTGTATACTGGAAGAGTATATTGGAAAGTGAGTTGTGGGAGTTGGGCCATCACAAGGAAACCAGAATCTGGCCAGCCCTTCACTTGAGCTACCAATATCTCCCCTTCCATTTGAAACGATGCTTCTCCTTCTGTTCTATGTACCCCAAGAGTCATGAATTTGATGCAGAGACACTTGTGGATAGCTGGGTAGCAGTGGGATTAGTTGTGTCCAATGGAAGCGTGCCTGCTGTAGATATCGGCCATGAGTACTTTGATCAGCTTGTGAGACGATCCTTCTTTCAGATATCTCCAACATCTTCCAGTTCTCGGCATGCATATGTCATGCAAGGTTTGCTGTATGAAACTGCGCAGAAAATTTCAACAAACGAATGCTTTGTGATTAAAGACAGCAGTGACTTGTTGAGAATACCTCCCAAAGTTCGTCATGTGTCAATACTCCACTTTAGTGGTCTTAGTAGCAGCGATTTAGAAAGCCTGCACAAGTACAAGACATTGCGGTCAGTTGTTTGCATTAGCATTGACTCTGATGTCATTACTACTTCTGTACTTGAAACATGGTTCTGTCATCTCACTAACATCCGGATGCTGAGGTTCATATCATGCCGGCTGAAGGAGCTACTGGGGAATGTTGGTAACCTGATACTTCTTCGCTATCTCGACATTTCCTCCTGTGACTTCGAGGCACTTCCTGATTCTTTTTGGCGTCTTCGTAATCTGGAAATCCTGGATGCTCAAAACTGCAGATTTGATAGTGTTCCCAAGGACATTGTCAAGCTCGTGAAATTGAGGAAGGCTAGACTGAGGAGTGATCTTAACAACCAGCTCGGACATGTGCCTGGAGTAGGCAATCTTATCTATCTTCAAGATATGCCTTACTATGCTGTTGATGATACACCAGGAAGGGGAATTCAAGAGCTGAAGAACCTGAACAATCTCCGAGGTGCACTAGAGATCAGTGGCCTTCACAATGTCACAAGCAAGGAGCAAGCAGTTGAGGCTGATCTAGACAAGAAAACCCATCTCAACACATTGACTCTTTCATGGCATGACTCGATCAGGCCTGACAAACACAACGGCGAACAGGAGATGGAGGTGCTCGAAAGCCTACGCCCTAGCCCCAGCATCAAGAATCTGGAAGTGAGGTTCTACATGGGCTCCGGATTTCATCCAAGTTGGCTCCTCGACGATGAGCCAATCAGTAGCAGGTTGGAATCGCTCTCGATCAGCTCCTGCCCTAACATAGCGAGCCTGTTCATCACCGTGACGGGGAGCAGCAGCAGAGGCAGCTCACCTGTAGTGTTCAGATCACTCACCAAGCTGAGCGTCACCTGGTGCAGAAAGCTAATGAGCCTCGACAATCTCCTGCAGCCAGAGCTTCTACCTGAAATCAAGGTGATACGGATCTCCAACTGCGAGGAGTTAGCATCATTGCCGACGAATCAGCTCATCAAATTCACTCACCTGGAGGATCTGGAGGTGTCCCACTGCTGGAGCCTGAGCTGGGAGCAAGGCCTGACCCTGCCCAGATCCCTGAAATCGCTCAAGCTGGAAGCTTGCGGAGAGCTCACGGATTCAGTTCTCCGATGCGGCCTGCGTGAACTCCCTGTGCTCGTGAGCTTGGAGTTGCAGTTTTGCTCCGGGGTGGAGTGCATCGGCGGTGAGATATGGAGCGAAATGCCGTCTCTCCAGAGGCTGAAGATCTTCTGCTGCCAGGAGCTGAGCTCCATCGGAGGAGAAGAATCCATTGCTAGGGTGGAGAGTGTTGATATCAGGCATTGCCCAAAGCTGAGAGAGCTGGAGCAGCCGTTTCAGAGAGGCTAA
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| Protein seq | MDSGNIGGSLQSSSGGDDEFDSRGGGGGVEGAGAAVAAAPATARRSRKRTRASWRTVTTDPSNFRAMVQEFTGIPSPPFVAGVGAPAASLRTRFDHLFPSPASALRSAAAGDPASSLPPYLLRPIAQKLPTASAQNSTMQQTRDPSALPHSSSFVTWTPDEFHSPGFNSSKQDERFVLENTLRGMYELIKLAECWVRKDYSIANLLQEAKDTVYCAEDLLDELNYYELQDGVGFSANRSSCPEFSDIKMTEIHGKLNSLKEQMGHLGLHDMQPQHFIFESVSQKYGNLMYDRTNFGYQEELQVLIDSFILDKNSLTSEQVSEVPSSGRAGQKNLSVLTIVGDGGIGKTALAHCSFNDQKVQDHFDLLVWICVSDGFDDKKLIKRLAWAIAESEMKSDDLICLQRVLTNGMIHHSRRLLLVLDDLQEDVCQEYYLGWESDQEVECIGRKIAARLNGSPLGAKIVGCLLNLKLDAVYWKSILESELWELGHHKETRIWPALHLSYQYLPFHLKRCFSFCSMYPKSHEFDAETLVDSWVAVGLVVSNGSVPAVDIGHEYFDQLVRRSFFQISPTSSSSRHAYVMQGLLYETAQKISTNECFVIKDSSDLLRIPPKVRHVSILHFSGLSSSDLESLHKYKTLRSVVCISIDSDVITTSVLETWFCHLTNIRMLRFISCRLKELLGNVGNLILLRYLDISSCDFEALPDSFWRLRNLEILDAQNCRFDSVPKDIVKLVKLRKARLRSDLNNQLGHVPGVGNLIYLQDMPYYAVDDTPGRGIQELKNLNNLRGALEISGLHNVTSKEQAVEADLDKKTHLNTLTLSWHDSIRPDKHNGEQEMEVLESLRPSPSIKNLEVRFYMGSGFHPSWLLDDEPISSRLESLSISSCPNIASLFITVTGSSSRGSSPVVFRSLTKLSVTWCRKLMSLDNLLQPELLPEIKVIRISNCEELASLPTNQLIKFTHLEDLEVSHCWSLSWEQGLTLPRSLKSLKLEACGELTDSVLRCGLRELPVLVSLELQFCSGVECIGGEIWSEMPSLQRLKIFCCQELSSIGGEESIARVESVDIRHCPKLRELEQPFQRG |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_09g0365000 | OsNip_09t0365000-00 | Chr09 | 11990015 | 11993428 | - | RAP2018-11-26 | ||
| CDS seq | ATGGATTCTGGTAATATTGGAGGGAGTCTCCAGTCGTCGAGCGGCGGCGACGACGAGTTCGATTCGCGGGGAGGTGGTGGTGGGGTGGAGGGGGCGGGGGCGGCAGTGGCCGCGGCGCCGGCGACGGCGAGGAGGTCGAGGAAGCGGACGAGGGCGTCGTGGCGGACGGTGACCACCGACCCCTCCAACTTCCGCGCCATGGTGCAGGAGTTCACCGGGATCCCCTCGCCGCCGTTCGTCGCGGGCGTCGGGGCACCCGCCGCCTCGCTCCGCACGCGCTTCGACCACCTCTTCCCCTCGCCGGCGTCCGCCCTCCGCTCCGCCGCCGCCGGCGATCCGGCATCCTCGCTGCCGCCGTACCTCCTCCGCCCCATCGCGCAGAAGCTCCCCACGGCTTCGGCGCAGAACAGCACCATGCAGCAGACTCGTGATCCCAGCGCACTTCCGCATTCATCCAGCTTCGTCACATGGACGCCGGACGAATTTCATTCACCCGGTTTCAACTCATCGAAACAGGATGAACGGTTTGTGCTCGAGAACACTCTCCGTGGTATGTACGAACTTATTAAGCTCGCGGAGTGTTGGGTTCGCAAGGATTATTCCATTGCTAATCTCCTCCAAGAAGCCAAGGATACAGTGTACTGTGCTGAAGATCTCTTGGACGAGCTCAATTACTATGAGCTCCAGGACGGAGTTGGGTTCAGTGCGAATAGATCTTCATGCCCAGAGTTTTCTGACATCAAGATGACGGAAATCCATGGAAAGCTCAATTCTCTCAAAGAACAAATGGGGCATTTGGGCTTGCATGACATGCAACCACAGCATTTTATTTTTGAATCGGTCAGCCAGAAATACGGCAATCTCATGTACGACAGAACAAACTTTGGCTATCAGGAAGAGTTGCAGGTGTTGATTGATTCATTTATTTTGGACAAGAACAGTCTGACCAGCGAGCAAGTCTCTGAGGTGCCCAGCAGTGGTCGAGCTGGACAGAAGAATCTGTCCGTTTTGACAATAGTAGGAGATGGTGGTATCGGGAAGACTGCCCTGGCTCATTGTTCTTTCAATGATCAGAAAGTTCAGGATCATTTTGATCTTCTTGTTTGGATATGTGTCTCAGATGGCTTTGATGACAAGAAGCTGATTAAGAGGTTAGCATGGGCTATTGCCGAAAGCGAAATGAAATCTGATGATCTAATTTGTCTCCAGAGAGTTCTAACTAATGGCATGATTCATCACTCAAGGAGGCTGTTGCTTGTGCTTGATGATTTGCAGGAGGATGTATGCCAAGAATATTACCTTGGATGGGAAAGTGATCAAGAGGTTGAGTGTATTGGCAGAAAAATAGCTGCAAGGCTAAATGGTTCTCCTCTTGGTGCTAAAATTGTTGGATGTCTACTGAACTTGAAACTGGATGCTGTATACTGGAAGAGTATATTGGAAAGTGAGTTGTGGGAGTTGGGCCATCACAAGGAAACCAGAATCTGGCCAGCCCTTCACTTGAGCTACCAATATCTCCCCTTCCATTTGAAACGATGCTTCTCCTTCTGTTCTATGTACCCCAAGAGTCATGAATTTGATGCAGAGACACTTGTGGATAGCTGGGTAGCAGTGGGATTAGTTGTGTCCAATGGAAGCGTGCCTGCTGTAGATATCGGCCATGAGTACTTTGATCAGCTTGTGAGACGATCCTTCTTTCAGATATCTCCAACATCTTCCAGTTCTCGGCATGCATATGTCATGCAAGGTTTGCTGTATGAAACTGCGCAGAAAATTTCAACAAACGAATGCTTTGTGATTAAAGACAGCAGTGACTTGTTGAGAATACCTCCCAAAGTTCGTCATGTGTCAATACTCCACTTTAGTGGTCTTAGTAGCAGCGATTTAGAAAGCCTGCACAAGTACAAGACATTGCGGTCAGTTGTTTGCATTAGCATTGACTCTGATGTCATTACTACTTCTGTACTTGAAACATGGTTCTGTCATCTCACTAACATCCGGATGCTGAGGTTCATATCATGCCGGCTGAAGGAGCTACTGGGGAATGTTGGTAACCTGATACTTCTTCGCTATCTCGACATTTCCTCCTGTGACTTCGAGGCACTTCCTGATTCTTTTTGGCGTCTTCGTAATCTGGAAATCCTGGATGCTCAAAACTGCAGATTTGATAGTGTTCCCAAGGACATTGTCAAGCTCGTGAAATTGAGGAAGGCTAGACTGAGGAGTGATCTTAACAACCAGCTCGGACATGTGCCTGGAGTAGGCAATCTTATCTATCTTCAAGATATGCCTTACTATGCTGTTGATGATACACCAGGAAGGGGAATTCAAGAGCTGAAGAACCTGAACAATCTCCGAGGTGCACTAGAGATCAGTGGCCTTCACAATGTCACAAGCAAGGAGCAAGCAGTTGAGGCTGATCTAGACAAGAAAACCCATCTCAACACATTGACTCTTTCATGGCATGACTCGATCAGGCCTGACAAACACAACGGCGAACAGGAGATGGAGGTGCTCGAAAGCCTACGCCCTAGCCCCAGCATCAAGAATCTGGAAGTGAGGTTCTACATGGGCTCCGGATTTCATCCAAGTTGGCTCCTCGACGATGAGCCAATCAGTAGCAGGTTGGAATCGCTCTCGATCAGCTCCTGCCCTAACATAGCGAGCCTGTTCATCACCGTGACGGGGAGCAGCAGCAGAGGCAGCTCACCTGTAGTGTTCAGATCACTCACCAAGCTGAGCGTCACCTGGTGCAGAAAGCTAATGAGCCTCGACAATCTCCTGCAGCCAGAGCTTCTACCTGAAATCAAGGTGATACGGATCTCCAACTGCGAGGAGTTAGCATCATTGCCGACGAATCAGCTCATCAAATTCACTCACCTGGAGGATCTGGAGGTGTCCCACTGCTGGAGCCTGAGCTGGGAGCAAGGCCTGACCCTGCCCAGATCCCTGAAATCGCTCAAGCTGGAAGCTTGCGGAGAGCTCACGGATTCAGTTCTCCGATGCGGCCTGCGTGAACTCCCTGTGCTCGTGAGCTTGGAGTTGCAGTTTTGCTCCGGGGTGGAGTGCATCGGCGGTGAGATATGGAGCGAAATGCCGTCTCTCCAGAGGCTGAAGATCTTCTGCTGCCAGGAGCTGAGCTCCATCGGAGGAGAAGAATCCATTGCTAGGGTGGAGAGTGTTGATATCAGGCATTGCCCAAAGCTGAGAGAGCTGGAGCAGCCGTTTCAGAGAGGCTAA
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| Protein seq | MDSGNIGGSLQSSSGGDDEFDSRGGGGGVEGAGAAVAAAPATARRSRKRTRASWRTVTTDPSNFRAMVQEFTGIPSPPFVAGVGAPAASLRTRFDHLFPSPASALRSAAAGDPASSLPPYLLRPIAQKLPTASAQNSTMQQTRDPSALPHSSSFVTWTPDEFHSPGFNSSKQDERFVLENTLRGMYELIKLAECWVRKDYSIANLLQEAKDTVYCAEDLLDELNYYELQDGVGFSANRSSCPEFSDIKMTEIHGKLNSLKEQMGHLGLHDMQPQHFIFESVSQKYGNLMYDRTNFGYQEELQVLIDSFILDKNSLTSEQVSEVPSSGRAGQKNLSVLTIVGDGGIGKTALAHCSFNDQKVQDHFDLLVWICVSDGFDDKKLIKRLAWAIAESEMKSDDLICLQRVLTNGMIHHSRRLLLVLDDLQEDVCQEYYLGWESDQEVECIGRKIAARLNGSPLGAKIVGCLLNLKLDAVYWKSILESELWELGHHKETRIWPALHLSYQYLPFHLKRCFSFCSMYPKSHEFDAETLVDSWVAVGLVVSNGSVPAVDIGHEYFDQLVRRSFFQISPTSSSSRHAYVMQGLLYETAQKISTNECFVIKDSSDLLRIPPKVRHVSILHFSGLSSSDLESLHKYKTLRSVVCISIDSDVITTSVLETWFCHLTNIRMLRFISCRLKELLGNVGNLILLRYLDISSCDFEALPDSFWRLRNLEILDAQNCRFDSVPKDIVKLVKLRKARLRSDLNNQLGHVPGVGNLIYLQDMPYYAVDDTPGRGIQELKNLNNLRGALEISGLHNVTSKEQAVEADLDKKTHLNTLTLSWHDSIRPDKHNGEQEMEVLESLRPSPSIKNLEVRFYMGSGFHPSWLLDDEPISSRLESLSISSCPNIASLFITVTGSSSRGSSPVVFRSLTKLSVTWCRKLMSLDNLLQPELLPEIKVIRISNCEELASLPTNQLIKFTHLEDLEVSHCWSLSWEQGLTLPRSLKSLKLEACGELTDSVLRCGLRELPVLVSLELQFCSGVECIGGEIWSEMPSLQRLKIFCCQELSSIGGEESIARVESVDIRHCPKLRELEQPFQRG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.968610 | 0.831672 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g20020 | RBH | 0.621403 | 0.571850 | 0.040762 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0365000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0007610 | RBH | 0.128341 | 2.136297 | 1.354946 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0007600 | RBH | 0.0 | 0.882926 | 0.430782 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007820 | RBH | 0.107592 | 1.812988 | 1.497321 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0007670 | RBH | 0.0 | 0.017140 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0007800 | RBH | 1.381629 | 0.0 | 1.215115 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0206400 | RBH | 0.8396035 | 3.821221 | 2.2262665 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007760 | RBH | 0.104009 | 0.122644 | 0.148892 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0186300 | RBH | 0.82253 | 3.4834055 | 4.4529005 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0007720 | RBH | 0.057089 | 0.073778 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0007520 | RBH | 0.248987 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0007420 | RBH | 1.432518 | 1.715364 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0007430 | RBH | 0.021014 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0007490 | RBH | 0.048112 | 1.130130 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G008060 | RBH | 0.032899 | 0.242946 | 0.290134 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007850 | RBH | 0.968312 | 1.884676 | 0.425762 |
