Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNip_09g0322500 OGI:09018720 | 14/16 Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) Chr09:9398945-9402419
Gene Symbol -
DNA seq

GGGCGGCAAGGCAGTTTGCAACTTGCAAGTTGAAATTGGGTTTGTGTATTCAATTGCACACGCAAGTCCTGCTGCCGTCCTCTACGGCCTGGGCATAGGTTGACTTCTTTTTTCTTTTCTTTTTTTTTTAAGGAATCATATGTTGAGTTGAGCTCGGAGCTTCTCGCAAGGAAGAGAAGGCTTGGCAGTTGTCACCTTGCAATGGCGATGGCGTCGAGCAGTGGAGACTGGAGAGCCATGTTCTAGCTCGGCCACGCCCACGCCCACACCCACGGCAGCAACCATGGATGCCAAACTGACGGTGGCAACTAGCTAGCTTAGCTGTGGTGATTGCCAGCAACTATTGAGCAATCAAGACTCTAATTCTTCGATGGTGGCGTCGGGCAACAACACGGCAGCACCGCTGGCGAATACGCTCCCGGCGGTCATTAATCCCCTACTGCTAGCAACGGCCTGCACTGGCTCTCCCAAGGGACTGGATCTTCTTCTCAACAGCAAGGTTGCAGCAGGTGATCAACGAGTGCTACCATTCGCACTTGGAAGCCAGAGATTTCGTGACCTGATATCAGCATATACCTCCAGCGACAGATCCTCCTTAGCGACGCCGACGCAGCGAATCCCTCCTCATGACGACCCAGAAGCACTTTTGGCAGAGATGCTGATGCTGGAAGGGGTCGCAGTTGATGGGGACACCGTGCTTCACGCGGTGGCCACCTATGGCGAGAATGATGACTTTCAGAAGTGTGCTCAAACTATGTGCAGCAAGGCGAGGCAGCTCCTCTTCAAGCAAAACAAGAACGGTGACACGCCCCTGCACTGCGCTGCACGGGCAGGTAAATCCCAAATGGTCTCTTGCCTCATTGATCTGGCCAGAGGCGGTGGCGGCGACGGCAACAGCAGCAGCAGCAGCAGCAACAATGGCGGGAGTACGGACAGAGTGAAGGAACTGCTGGAAACGGAAAACGAGCTTAAGGAGACGGCCTTGCATGAGGCTGTTCGCATTGGGGATAATGCTATGGTCGAGCTGCTACTGCAGGAGTATCCCGAGCTGGCCAGTTTTCCAAAAGACGGCACCTCACCTTTGTTCTTAGCCATCTTGCTGCAGGAGAACATCATCGTGGAGACGCTGTACAGTAAGAGCAACAAGAAGCTTTCTTACTCTGGACAAAAGGGACAAAATGCTCTTCATGCTGCTGTCCTCCGAGGCACAGGTATCACCAAACTACCAACCAACAAGTACCCTTCCTTCAATTTTGGATGGTTAAAAGTTTGCAAGTTTTCTTTAAAAATATACATATTTGCTTCTTCTTCTTCTTCTCCTTCTCTTCTATCTTTTCTTTCGCACCGGATATTTGCGAGTAAAATTGAAGTGGCCCGGCGAAAAGTAAGATTTAACTGCAAATTTACTTATGAGATGCCGTCCACCTAGAGTATATATTACGATTTGTTTTTAGTTATGTACGTTAAATTCCTTTTTCCATATTCTCTGTGTATGCTCTATTCGGTGCACATCTATTAGTCCTCTAGAATGTAGCTACGTGCAAGTACCCTTTTTGTGTTGAGAGCAATTTTGCCATCTAACATTTGTTATCTTGAGTTACCACAAATTTTTGTTAACTCGAGTTAGTACCTCGAGACACCGAGATCTTATGTCCAAAATATGATATCTCGAGACACCAAATGTTGGATGATAAAAATGCTACTGTGTTATACTTTATAATGAATTCCTCGATCAATAAATAAGCGCTAAACAGAAGAGAGTACACGATTTTCAGATGTCACTAGGAAGATACTGAAATGGAACAAGAATCTTAGCACGGAAAGGGATGAGAAGGGCAGTACGCCCCTTCACTTTGCGGCGGCCAAGTATTTCGATGTTGTGCGAACCCAGCTGGGACTGATCAGGCCGTTCTTCGCGGCTGCGGCGCTGAGACAATCGCGAGGAAGCGTGTGCTGGCTCGTCCTGGATGCTAATCCGGCCGCGCTGTACCAAGCCGACCATGACGGGTTGTACCCGATACATGTAGCAGCCTCGGTGGGCGCCGTAGGCTCCATCGCCATCTTCGTCGACGCGTCGCCCAGCTGCGCCGGCCTGCGCGACGCCAAGCGGAGGACTTTCCTTCACGTTGCCGTCGAGAGAGGGCAGATCGACGTCGCCGGTTATGCTTGCAGCAACAGGCTGCTGTCATGGGTTCTGAACATGCGAGACGCCGAGGGGAACACTGCCCTGCACCTTGCTGTGCAGGCCGGGAGCCTCCGAATGTTCTCCGTGCTGTTCGGGAATCGCCAGGTACGCTTGAACTTGACCAATAACAATGGGGAAACTCCTCTAGATATATCACGGTACAAGATCCCCAGAGGAATGTACTACGGTCAGGTAATTATTTCTCAACTGTGATAGTAATTTTTATTTTTCAAGAATAGTAATTAATAAGCTTTCTAGTAATTAATTGGAGAGAGGTTGTTTTCCTTCTTCTTTTGCAGAACAGTGAACCAAAAATACACGATTCGCTCGCACTCGCCGGGGCTACCAACGGCTCTTGTCGTTTGGATCATTTTCAGCAGAGTTATACTCAGCTGACCAAGCATGATGAAAAGGAGGAATCAGATAAGGTGAGAGATTCGACACAAACTCTAGCAATCGGCTCAGTTCTGCTGGCGACTGTGACGTTCGGTGCGACTTTCGCTCTGCCTGGAGGCTACAGAGCCGATGATCACGTCAACGGAGGTACACCAACACTTGCAGGGAGGTATACCTTTCATGCCTTCATCATGGCCAACACATTTGCACTTATCTTCGCCGCCATAGCTACCATTGGGCTCATGTACTCTGGATCCCCACTGTTCAACTCAAGGAGCCGCAAGACCTACTTGGTTACAGCCTTGTACTGCATGGAGACCTCGGTCGCCTGCTTGATTGCTACCTTCGCAGTGGGTTTGTATATGGTGCTAGCTCCGGTTGCTCACAAGACTGCCATAGCAATATGTGTCCTCAGCCCCGTTGTCCTGCTAAGCAAGAACATGGAGTTTTGGGTGAAGTGGGCCCTTCTTGCAGCACCACTATATAACAGAATGGGGCTACTATGGGCAATGCGAAACTTCGCTTCAGTACTACTGAAAAATACTCTATACGAGTGTTGGCCCTTCATATTGATCTTTAGTTGGGCCGCATATGCAAGGAACAGCTAGCTACCACAGTCTAAAGGACGGAACAACGACCAGCTAGCACCTTAATTTGGCTAGAAGCGCCATCACATGCTGTCTTCAGTATTACCATGTCATTGGAATTGTAGAATGGAGCAGCAATGCCAGCACCCAGCAGTGCGTTGCTTCAGGAAAAACTCTAGAGTATCTGTCTCTTCAGAATCTGTGACAACAAGATGTGTATGCATTTGTGTCAGCTTACATACTCCAAACCTTTCGTGTTTAAAATTGTTATAACTTACAAACCCCTTTTTTTTATATCTGACACCGT

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CDS seq

ATGGTGGCGTCGGGCAACAACACGGCAGCACCGCTGGCGAATACGCTCCCGGCGGTCATTAATCCCCTACTGCTAGCAACGGCCTGCACTGGCTCTCCCAAGGGACTGGATCTTCTTCTCAACAGCAAGGTTGCAGCAGGTGATCAACGAGTGCTACCATTCGCACTTGGAAGCCAGAGATTTCGTGACCTGATATCAGCATATACCTCCAGCGACAGATCCTCCTTAGCGACGCCGACGCAGCGAATCCCTCCTCATGACGACCCAGAAGCACTTTTGGCAGAGATGCTGATGCTGGAAGGGGTCGCAGTTGATGGGGACACCGTGCTTCACGCGGTGGCCACCTATGGCGAGAATGATGACTTTCAGAAGTGTGCTCAAACTATGTGCAGCAAGGCGAGGCAGCTCCTCTTCAAGCAAAACAAGAACGGTGACACGCCCCTGCACTGCGCTGCACGGGCAGGTAAATCCCAAATGGTCTCTTGCCTCATTGATCTGGCCAGAGGCGGTGGCGGCGACGGCAACAGCAGCAGCAGCAGCAGCAACAATGGCGGGAGTACGGACAGAGTGAAGGAACTGCTGGAAACGGAAAACGAGCTTAAGGAGACGGCCTTGCATGAGGCTGTTCGCATTGGGGATAATGCTATGGTCGAGCTGCTACTGCAGGAGTATCCCGAGCTGGCCAGTTTTCCAAAAGACGGCACCTCACCTTTGTTCTTAGCCATCTTGCTGCAGGAGAACATCATCGTGGAGACGCTGTACAGTAAGAGCAACAAGAAGCTTTCTTACTCTGGACAAAAGGGACAAAATGCTCTTCATGCTGCTGTCCTCCGAGGCACAGATGTCACTAGGAAGATACTGAAATGGAACAAGAATCTTAGCACGGAAAGGGATGAGAAGGGCAGTACGCCCCTTCACTTTGCGGCGGCCAAGTATTTCGATGTTGTGCGAACCCAGCTGGGACTGATCAGGCCGTTCTTCGCGGCTGCGGCGCTGAGACAATCGCGAGGAAGCGTGTGCTGGCTCGTCCTGGATGCTAATCCGGCCGCGCTGTACCAAGCCGACCATGACGGGTTGTACCCGATACATGTAGCAGCCTCGGTGGGCGCCGTAGGCTCCATCGCCATCTTCGTCGACGCGTCGCCCAGCTGCGCCGGCCTGCGCGACGCCAAGCGGAGGACTTTCCTTCACGTTGCCGTCGAGAGAGGGCAGATCGACGTCGCCGGTTATGCTTGCAGCAACAGGCTGCTGTCATGGGTTCTGAACATGCGAGACGCCGAGGGGAACACTGCCCTGCACCTTGCTGTGCAGGCCGGGAGCCTCCGAATGTTCTCCGTGCTGTTCGGGAATCGCCAGGTACGCTTGAACTTGACCAATAACAATGGGGAAACTCCTCTAGATATATCACGGTACAAGATCCCCAGAGGAATGTACTACGGTCAGAACAGTGAACCAAAAATACACGATTCGCTCGCACTCGCCGGGGCTACCAACGGCTCTTGTCGTTTGGATCATTTTCAGCAGAGTTATACTCAGCTGACCAAGCATGATGAAAAGGAGGAATCAGATAAGGTGAGAGATTCGACACAAACTCTAGCAATCGGCTCAGTTCTGCTGGCGACTGTGACGTTCGGTGCGACTTTCGCTCTGCCTGGAGGCTACAGAGCCGATGATCACGTCAACGGAGGTACACCAACACTTGCAGGGAGGTATACCTTTCATGCCTTCATCATGGCCAACACATTTGCACTTATCTTCGCCGCCATAGCTACCATTGGGCTCATGTACTCTGGATCCCCACTGTTCAACTCAAGGAGCCGCAAGACCTACTTGGTTACAGCCTTGTACTGCATGGAGACCTCGGTCGCCTGCTTGATTGCTACCTTCGCAGTGGGTTTGTATATGGTGCTAGCTCCGGTTGCTCACAAGACTGCCATAGCAATATGTGTCCTCAGCCCCGTTGTCCTGCTAAGCAAGAACATGGAGTTTTGGGTGAAGTGGGCCCTTCTTGCAGCACCACTATATAACAGAATGGGGCTACTATGGGCAATGCGAAACTTCGCTTCAGTACTACTGAAAAATACTCTATACGAGTGTTGGCCCTTCATATTGATCTTTAGTTGGGCCGCATATGCAAGGAACAGCTAG

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Protein seq

MVASGNNTAAPLANTLPAVINPLLLATACTGSPKGLDLLLNSKVAAGDQRVLPFALGSQRFRDLISAYTSSDRSSLATPTQRIPPHDDPEALLAEMLMLEGVAVDGDTVLHAVATYGENDDFQKCAQTMCSKARQLLFKQNKNGDTPLHCAARAGKSQMVSCLIDLARGGGGDGNSSSSSSNNGGSTDRVKELLETENELKETALHEAVRIGDNAMVELLLQEYPELASFPKDGTSPLFLAILLQENIIVETLYSKSNKKLSYSGQKGQNALHAAVLRGTDVTRKILKWNKNLSTERDEKGSTPLHFAAAKYFDVVRTQLGLIRPFFAAAALRQSRGSVCWLVLDANPAALYQADHDGLYPIHVAASVGAVGSIAIFVDASPSCAGLRDAKRRTFLHVAVERGQIDVAGYACSNRLLSWVLNMRDAEGNTALHLAVQAGSLRMFSVLFGNRQVRLNLTNNNGETPLDISRYKIPRGMYYGQNSEPKIHDSLALAGATNGSCRLDHFQQSYTQLTKHDEKEESDKVRDSTQTLAIGSVLLATVTFGATFALPGGYRADDHVNGGTPTLAGRYTFHAFIMANTFALIFAAIATIGLMYSGSPLFNSRSRKTYLVTALYCMETSVACLIATFAVGLYMVLAPVAHKTAIAICVLSPVVLLSKNMEFWVKWALLAAPLYNRMGLLWAMRNFASVLLKNTLYECWPFILIFSWAAYARNS

Function Ankyrin repeat-containing protein At2g01680 [UniProtKB/Swiss-Prot:Q9ZU96]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNip_09g0322500 OsNip_09t0322500-01 Chr09 9399112 9402405 + RAP2018-11-26
CDS seq

ATGGTGGCGTCGGGCAACAACACGGCAGCACCGCTGGCGAATACGCTCCCGGCGGTCATTAATCCCCTACTGCTAGCAACGGCCTGCACTGGCTCTCCCAAGGGACTGGATCTTCTTCTCAACAGCAAGGTTGCAGCAGGTGATCAACGAGTGCTACCATTCGCACTTGGAAGCCAGAGATTTCGTGACCTGATATCAGCATATACCTCCAGCGACAGATCCTCCTTAGCGACGCCGACGCAGCGAATCCCTCCTCATGACGACCCAGAAGCACTTTTGGCAGAGATGCTGATGCTGGAAGGGGTCGCAGTTGATGGGGACACCGTGCTTCACGCGGTGGCCACCTATGGCGAGAATGATGACTTTCAGAAGTGTGCTCAAACTATGTGCAGCAAGGCGAGGCAGCTCCTCTTCAAGCAAAACAAGAACGGTGACACGCCCCTGCACTGCGCTGCACGGGCAGGTAAATCCCAAATGGTCTCTTGCCTCATTGATCTGGCCAGAGGCGGTGGCGGCGACGGCAACAGCAGCAGCAGCAGCAGCAACAATGGCGGGAGTACGGACAGAGTGAAGGAACTGCTGGAAACGGAAAACGAGCTTAAGGAGACGGCCTTGCATGAGGCTGTTCGCATTGGGGATAATGCTATGGTCGAGCTGCTACTGCAGGAGTATCCCGAGCTGGCCAGTTTTCCAAAAGACGGCACCTCACCTTTGTTCTTAGCCATCTTGCTGCAGGAGAACATCATCGTGGAGACGCTGTACAGTAAGAGCAACAAGAAGCTTTCTTACTCTGGACAAAAGGGACAAAATGCTCTTCATGCTGCTGTCCTCCGAGGCACAGATGTCACTAGGAAGATACTGAAATGGAACAAGAATCTTAGCACGGAAAGGGATGAGAAGGGCAGTACGCCCCTTCACTTTGCGGCGGCCAAGTATTTCGATGTTGTGCGAACCCAGCTGGGACTGATCAGGCCGTTCTTCGCGGCTGCGGCGCTGAGACAATCGCGAGGAAGCGTGTGCTGGCTCGTCCTGGATGCTAATCCGGCCGCGCTGTACCAAGCCGACCATGACGGGTTGTACCCGATACATGTAGCAGCCTCGGTGGGCGCCGTAGGCTCCATCGCCATCTTCGTCGACGCGTCGCCCAGCTGCGCCGGCCTGCGCGACGCCAAGCGGAGGACTTTCCTTCACGTTGCCGTCGAGAGAGGGCAGATCGACGTCGCCGGTTATGCTTGCAGCAACAGGCTGCTGTCATGGGTTCTGAACATGCGAGACGCCGAGGGGAACACTGCCCTGCACCTTGCTGTGCAGGCCGGGAGCCTCCGAATGTTCTCCGTGCTGTTCGGGAATCGCCAGGTACGCTTGAACTTGACCAATAACAATGGGGAAACTCCTCTAGATATATCACGGTACAAGATCCCCAGAGGAATGTACTACGGTCAGAACAGTGAACCAAAAATACACGATTCGCTCGCACTCGCCGGGGCTACCAACGGCTCTTGTCGTTTGGATCATTTTCAGCAGAGTTATACTCAGCTGACCAAGCATGATGAAAAGGAGGAATCAGATAAGGTGAGAGATTCGACACAAACTCTAGCAATCGGCTCAGTTCTGCTGGCGACTGTGACGTTCGGTGCGACTTTCGCTCTGCCTGGAGGCTACAGAGCCGATGATCACGTCAACGGAGGTACACCAACACTTGCAGGGAGGTATACCTTTCATGCCTTCATCATGGCCAACACATTTGCACTTATCTTCGCCGCCATAGCTACCATTGGGCTCATGTACTCTGGATCCCCACTGTTCAACTCAAGGAGCCGCAAGACCTACTTGGTTACAGCCTTGTACTGCATGGAGACCTCGGTCGCCTGCTTGATTGCTACCTTCGCAGTGGGTTTGTATATGGTGCTAGCTCCGGTTGCTCACAAGACTGCCATAGCAATATGTGTCCTCAGCCCCGTTGTCCTGCTAAGCAAGAACATGGAGTTTTGGGTGAAGTGGGCCCTTCTTGCAGCACCACTATATAACAGAATGGGGCTACTATGGGCAATGCGAAACTTCGCTTCAGTACTACTGAAAAATACTCTATACGAGTGTTGGCCCTTCATATTGATCTTTAGTTGGGCCGCATATGCAAGGAACAGCTAG

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Protein seq

MVASGNNTAAPLANTLPAVINPLLLATACTGSPKGLDLLLNSKVAAGDQRVLPFALGSQRFRDLISAYTSSDRSSLATPTQRIPPHDDPEALLAEMLMLEGVAVDGDTVLHAVATYGENDDFQKCAQTMCSKARQLLFKQNKNGDTPLHCAARAGKSQMVSCLIDLARGGGGDGNSSSSSSNNGGSTDRVKELLETENELKETALHEAVRIGDNAMVELLLQEYPELASFPKDGTSPLFLAILLQENIIVETLYSKSNKKLSYSGQKGQNALHAAVLRGTDVTRKILKWNKNLSTERDEKGSTPLHFAAAKYFDVVRTQLGLIRPFFAAAALRQSRGSVCWLVLDANPAALYQADHDGLYPIHVAASVGAVGSIAIFVDASPSCAGLRDAKRRTFLHVAVERGQIDVAGYACSNRLLSWVLNMRDAEGNTALHLAVQAGSLRMFSVLFGNRQVRLNLTNNNGETPLDISRYKIPRGMYYGQNSEPKIHDSLALAGATNGSCRLDHFQQSYTQLTKHDEKEESDKVRDSTQTLAIGSVLLATVTFGATFALPGGYRADDHVNGGTPTLAGRYTFHAFIMANTFALIFAAIATIGLMYSGSPLFNSRSRKTYLVTALYCMETSVACLIATFAVGLYMVLAPVAHKTAIAICVLSPVVLLSKNMEFWVKWALLAAPLYNRMGLLWAMRNFASVLLKNTLYECWPFILIFSWAAYARNS

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Gene Transcript Chromosome Start End Strand Source
OsNip_09g0322500 OsNip_09t0322500-02 Chr09 9398945 9402419 + IsoSeq
CDS seq

ATGGGGACACCGTGCTTCACGCGGTGGCCACCTATGGCGAGAATGATGACTTTCAGAAGTGTGCTCAAACTATGTGCAGCAAGGCGAGGCAGCTCCTCTTCAAGCAAAACAAGAACGGTGACACGCCCCTGCACTGCGCTGCACGGGCAGGTAAATCCCAAATGGTCTCTTGCCTCATTGATCTGGCCAGAGGCGGTGGCGGCGACGGCAACAGCAGCAGCAGCAGCAGCAACAATGGCGGGAGTACGGACA

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Protein seq

MGTPCFTRWPPMARMMTFRSVLKLCAARRGSSSSSKTRTVTRPCTALHGQVNPKWSLASLIWPEAVAATATAAAAAATMAGVRT

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.000000 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g15370 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0322500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0005930 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0005520 RBH 0.0 2.734341 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0006190 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0005540 RBH 0.074798 0.306244 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0006200 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0175400 SBH 0.427968 0.7971435 0.0741595
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0006360 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0152500 RBH 0 0.0349805 0.018147
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0006130 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0006010 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0005990 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0005880 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0005960 SBH 0.0 1.256895 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G005770 RBH 0.0 0.465966 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0005650 RBH 0.0 12.496614 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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