Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_09g0313500 | OGI:09025980 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr09:8510839-8516543 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGAACAAGGAGAACATAAACAGAGTAGATGTATATCAAATTTTACCAGTTACAATACACAGAACTGCATACTGTCGTACCAATGAAAAAAAACAAGCCTGCCGGTTATCTAATGTGAAGAGCATTCCATCATACAGAAGATTTGGTTTGCTTAACCTCAAAATGATATTTTTGTTATAATTTCTGCCACCAGTTGTCCCTCCAAATCAAGCTTATTTTATTGCCTGAATATAGAGTACATGTTCCCAGTCATAAAATTCTCTATCTTATAATCTCCATTGGTCGTCCAGCTGCATGGTTTAAGTATTCACCCTGAAGCTTTCTGAATATATATATAATAAAACCCAGCAAGGCATGCTATTGCCGCAAAGAAGGCGAGCAAGATTCCAATGAGCGTGAAGTCTCTGGTTGCCAGCAGCAAGAGTACAAGAACAATGGCAAGTGGAGGGAGGAAATACCGTTTTAAGCTATCCAGAAGGCCAGTTTGTGAGGCCATCCTGACAAGCTTTCTGAGGATAATATATGCAGAAGGACGATCTTCCAACTGAGGGCCAACCGCTGTCTTAATCATTTGAAAATCAGGTCTGCCCTTGTTGTAAGCCAAGAACGGGGCCCCATCAGGCAAATTTGCATAAACTCTGTCCATGTTACGTATAGCCGACCAGCCTTTGCTGTTGGGAACTAACTTCCTGAGTAGTTCTGTCGTGCCGACTATGGTGAATGTTTGCAGCAGAGGAGCCTCATGGCCTGTCAACCAATCTGGAAGTTCTTTCGTCACTCTGTCCACGAGGCGGACATGCCTTAGGCCTGCAACTCCCCTCAAATCTTGCAGCATGGAGCAGTCAACGACTACCAGGACCTGAAGCACTGGAAGATTTGAGATCATGACAAGTTCTCTGCAGTCTTGGACAACCAATTCCTTGAGCATAGGAAGGTTGTCAATCACTTGGAGGCTATCAGCACCAACAATCTTCATACTTGTCAGTACCTTGCAGTAACCAAGGCCAGATGGGAGGGATCTCAATTTGGGACTGTTCTCTAGGTGAAATTTGGTCAGGGAAAGCAGGTCACCATGTTTAAACCTATCCAATGATTCCAAGGCCTGCATGTCCCTGAGGTCCAGCTGCTCTAGCTTTGGAAATACCAGTTTAGTCGTAGCACCAGTCCGCCACTCGATGATGCGTAACTTAGGACATCCATTGATTGTGAGGAACTTCAGTTGTTGTAGCTGCCCCAATGCTGGGAGGCTATCACAGAGTTTGCAATCGGTAAGCACAAGCCGCTGGAGGTTTCGAAGTTGCAATATCCAATCCGGAAGAGATGATCCATAATAGCTCGCTATTTTGAGATATTCCAAGCATTGTGGAGGTTGGAGACCGCAAAGCACACTGAGCCATCTATCTTGTTCTTCCTCTGGTACAAAGACTTGTGAATCACTGGTGCTACTACCACATAACTCAAGATGTGTGAGGTGAGACTTGCTTGCTAGGTTAGCTTCTTGCGCCCTAGATTCATCTGGAACTCTATCGATGCCCATTATCTGCAGGCTCCGCAATGAGTTCAAAGGACTCAGCTCTTTCATAGGCCATCCGTTCTGATGATCATTGTCGGGTACTGCCGCATTGTGGTCTACTATGAAACCATGCAGTGCAGTTAGCTGCTCCAGGGCTGATAATCTTGACAGAACTATATGTGGTGTAGTCCCTTCCAAATCAAGGCTCCGCAAGCTGACCAGATTACTAATTTCCTCTGGCAGGGTTTCGAGCCAATAGCAACACCGAAGTATCAAGAACTGCAGGTTGCTGAGGCTCTCAATAGATTCCGGAAGCTCTAAAACTTGTGTCAGTGAGAGGTTTAAGAGCCTAAGGTGATGTAGATGTTCTAGTGACTTCGGTATGTACCTAATGCAAGTACCAGTAAGGTCAAGAGATCTCAAATTTATGAGAGATCTCAAATTTATGAGCCAATTGAGGCCGCGATCTCCTGATGGATTCTTGTAGACAAAAGCTGTCCTGAAGCTTCTAAAAAACTTTGTCCCTTCGGTGCTATCTGTTGATTTCTTGTCTTTAGTTGAAGGTTGCAGCAAGGACTTTACACAATCATGCACTGTGCATTTCGACATGTCAAAGCACCCAATCTCAGGCTGCAGAAGATTTCTTAGAACCAATTCCTTGTAATACTGTTCTGCGATATCTTCAGGGTTGCGGTTATCTTGTTCTCGAATAAAGCCCTCTGCTATCCATAGCTGAGTAACAATTTGTGGCCTAATAACAAATCCTTCAGGGAGCTGCAAGCAGTAATCAAAACATAATTTCAAATGATATGGCAGACTGTAATAGGCTAAGTAGATGGGGAGACATATTTCCTCCATGCCATCAGGAACGTTCTCAAGAGTCCACCCTTCACTCTCACTGATCACTTCCTGCCACTCCTCTCTTCTTGGGTTCTTTGTTCCTAGGAGACCACCCAAAACTTTGATAGCCAATGGAACCTTGTTACATTTCTGGATAATTGTTATACCAATATCTGTTAATGCGTCGCAATCCTGTTCATCCAGGCAAGCACTACTGCAGAGCAGAGACCAACAATCGGGGAAACTCAATTTGTTTACTTTGTGGATGTCATCAGAAGCAATTTGCCTCAGAACTCCCTCATCCTGGGTAGTCAACAGAATTCGGCTTCCTTGCTGTGCTTGCAAGCTAACTTTTAGAAAATCCTGATGAATCTGGTCAGCCCATACATCATCAAGTACCAGTAAGAATTTCTTTGCTCCAAGTATTGTAACCAACATGTCCTCAATTTGCTCATTGCTCTTTTTTTTTGCCTCTCCAGGCTTGCCACCAGAAGAACTTAGAATTGCACGTAGCAATTTCTTTTTAGTGAAAGATTTGGAGCCATTTACCCATACAACAGTGCTGAATGCACTTTCTGTGAGGAGATCATCATGTACTTTTCGTGCCAACATAGTCTTGCCAATTCCACCCAACCCAAAGATTGCAATGACAGCACTGGTGCTTTCGCTGCCAGTCAATTTGTTGATCAACTTCAACTTTTCTTGTTCAATATCTCCTACAAGAGTGTACTGGGGTGAGAGATCCCCAGGAAATTCAGATATTCGACTGTGTCTTTGCAATTTGATTGGTTGAAGGCCAAGTTCACGACCATTCTGTAAGATCCCATGGAATTTCTTATTCAGCTTTTCAGTAGTGATTTTCATTTTCTTGTCAACCTCATGGTTAGCTGATGAGCGTGAGAACCAATGGCGAATCTGTTCAGATAAATAATTCATTTCTTGTGAATGGTCATTGAAGGCAAATAAGAATAGCGTTTAAGAGACATAGTATATGGAAAATGCATGTGGATACACCATGCGTGATTTCAACTAGCAAAGATTTTCTACTCTCCAAAGTTATTAAGTTGGAATGGAAGAGGAAGTTGGTTTTGATTTTCTTTAAGTGCTTTAGTGCAGTTTAGCTTCTCTCAATTATTGTGAGTTAATAGATTGCTGAGTAACCTGAGTTCAGGCACTATCTGTATTGTGGTAAGAGACATAAAGTAGGTTTTGGGTTTGTACTTGGAGCCCCTTTCTCTTCTGTAGTAAAAGAGGGCCCCTCATATAGGGGAAGCTAGTACCGGGGCGGAGTTTCTAAGAAGTTCTGTTATGAAAATTGATAGTAGCACAGCAAAGAGAGTGTGAAATTGTGTTGGTTACCAAAGGAACATATCTTATGCTAAAGATACACAACTTCCAAAGGTAAAACTTATTTGGATAGCAGCATATGAGATAAGATATAACATGCTTAGAGGTTTCACCACAAGAAGTAATGGGCTAGGCCTGGGCTTGAGTTTTTGACCTAAAAACCTTGATTGAAGCCCAAACAAGCCCAGAAAGTGGTTAAATATGAGTACTTATATGTTTTACATTTATAAAATTAGTACAATAAATTGTTGATCACAGGAAGAAGAGGCAAAATGAGGGTTTGGGGGTCTAGGATGGGTAGTTTGACTGGTTTTCCAAAGACTGGCCCAGCCCAGCCTGACTTTGAAATTTGTAGGGGGGATAGGGGTAGCTGATACTAAAAATCGGTTTATAGATGCTTGTCGTTTTGACTAATTCTCTTGTTCACAAATACTTGTTGGTTTTCATTTCCCAATGAATAGTTTTCCAATTTGTGCTTCTGTACCATGGGCCCAGGCTGTGCACAAAGTCAGAGAGAAAATTCATTTTTTTCTGCCGATTGTGCTGGCTCTTGAACGCACTAAAATATTACTCCATAAAACTACTAGCAATTTGCACCTAAAAAATGAGAGGATCATAGGGGTCTTTTTGTTACATTACATAAATAAACTGATTGCCTTGTTTCTTGCGGGGTCAAAACCGACAAATATTGAGCATTTTTTATGTAGCTTTAATGTTATATTGGTCCCCAGCTTGTGGTCCCCTCCAATTCATACATTGAGCTGCTTCTATAAGCCAAAGTGGATCCCACCTTAAGACCATTATAGGTCGCATACACCAGGGATGCCCTAAATGTTTTTATATTTAAAGATTAGGACTGAATATGTAATATTTATATGAATCCCATCGCAAAATATATATGCCTGAGATCCATTGTACCATCCAAGCACTGAGCTGGTAATGATAAGAATGGCAGAGGTACTTACGCTCAAAGATAGAACCTAACTAATCAAATGGAAAACTAAAAATGTCAACAAAATAAAAAGAATATCTAATATAGAAACTATAATCATCCTTGCTTCCAAATACTAAATTGTGATCAGTACTGCTGCTCATAACTGGTAGTAAGGTAACAAACTTATGAACGTTGTTTCTGAAGTTGCAAGGCTGGCGAAATCCGGATTGAGATCCTCTGCAGTCACTGCACCGTGCCTTTTTCACTAACATGTGGATCAATGACAAAGGCACGGTACAGTCGACTGCTGAGGATTCAGATCCGCAAAATCCTGATTAGCAACTCAATTTGGGGGGACAGACACACAAGCAGCACATATTTTCCTCCTGAAATTTGATTATAATATATGTCCGAGCATAAACTGAACTAGATGTGGCAAGATTCCCAAAATTAGCCAAGACACTAGAGCGCGATTAATAGTGTGATGTCAACATATGGCACTAAAGAACTCCAATGGTCCACAAATTGAGTAATTTGATTTATAGAGTTCAAATTTCTCCATCTTAGTTGTTGTTTGTGAATTGCGAAATTATATAAAAACGGGGGAAGAAAAAAAAAGAAATAAAAATAGAAGCCCAGCGAGAGCGTCGGCCTTACCGATTTCTTCCTCTCCTGATCCTGTTCCGGCCGCCGCCGCTGCGCCGCCATGGAAGCTCTGAATTCATCGAGCGCGTCGTCCAGGTCCTCCTTGGCGCTCTGGAGCCGCCGGAGCCACGCGGCGAGGTCCTTGGGGTTGTCGCACGCCCGCTTCTTCAGCCTCAGCTCGGCGTCGTTGACCAGCTTGACCCCCTCGTCGGCGATGTCCACCAGCTGCCGGAACTCGCCGTCAAGGCCGGGGCCTTTGCTCGACTCACCCGGCGGCGCCGGATTGCCGTCGGCGGCGGCCCTCGGTCCCACCGGCAGCGGCGCTCGTCGTACGGCCATGTGGTTCGCTTTGCCCCGGCGACCGCGCAGCTTCACAACCACCTAAGCGTTGGGTTTCCTCAAATAAATCGCACGAAGATGTATATGT
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| CDS seq | ATGGCCGTACGACGAGCGCCGCTGCCGGTGGGACCGAGGGCCGCCGCCGACGGCAATCCGGCGCCGCCGGGTGAGTCGAGCAAAGGCCCCGGCCTTGACGGCGAGTTCCGGCAGCTGGTGGACATCGCCGACGAGGGGGTCAAGCTGGTCAACGACGCCGAGCTGAGGCTGAAGAAGCGGGCGTGCGACAACCCCAAGGACCTCGCCGCGTGGCTCCGGCGGCTCCAGAGCGCCAAGGAGGACCTGGACGACGCGCTCGATGAATTCAGAGCTTCCATGGCGGCGCAGCGGCGGCGGCCGGAACAGGATCAGGAGAGGAAGAAATCGATTCGCCATTGGTTCTCACGCTCATCAGCTAACCATGAGGTTGACAAGAAAATGAAAATCACTACTGAAAAGCTGAATAAGAAATTCCATGGGATCTTACAGAATGGTCGTGAACTTGGCCTTCAACCAATCAAATTGCAAAGACACAGTCGAATATCTGAATTTCCTGGGGATCTCTCACCCCAGTACACTCTTGTAGGAGATATTGAACAAGAAAAGTTGAAGTTGATCAACAAATTGACTGGCAGCGAAAGCACCAGTGCTGTCATTGCAATCTTTGGGTTGGGTGGAATTGGCAAGACTATGTTGGCACGAAAAGTACATGATGATCTCCTCACAGAAAGTGCATTCAGCACTGTTGTATGGGTAAATGGCTCCAAATCTTTCACTAAAAAGAAATTGCTACGTGCAATTCTAAGTTCTTCTGGTGGCAAGCCTGGAGAGGCAAAAAAAAAGAGCAATGAGCAAATTGAGGACATGTTGGTTACAATACTTGGAGCAAAGAAATTCTTACTGGTACTTGATGATGTATGGGCTGACCAGATTCATCAGGATTTTCTAAAAGTTAGCTTGCAAGCACAGCAAGGAAGCCGAATTCTGTTGACTACCCAGGATGAGGGAGTTCTGAGGCAAATTGCTTCTGATGACATCCACAAAGTAAACAAATTGAGTTTCCCCGATTGTTGGTCTCTGCTCTGCAGTAGTGCTTGCCTGGATGAACAGGATTGCGACGCATTAACAGATATTGGTATAACAATTATCCAGAAATGTAACAAGGTTCCATTGGCTATCAAAGTTTTGGGTGGTCTCCTAGGAACAAAGAACCCAAGAAGAGAGGAGTGGCAGGAAGTGATCAGTGAGAGTGAAGGGTGGACTCTTGAGAACGTTCCTGATGGCATGGAGGAAATATGTCTCCCCATCTACTTAGCCTATTACAGTCTGCCATATCATTTGAAATTATGTTTTGATTACTGCTTGCAGCTCCCTGAAGGATTTGTTATTAGGCCACAAATTGTTACTCAGCTATGGATAGCAGAGGGCTTTATTCGAGAACAAGATAACCGCAACCCTGAAGATATCGCAGAACAGTATTACAAGGAATTGGTTCTAAGAAATCTTCTGCAGCCTGAGATTGGGTGCTTTGACATGTCGAAATGCACAGTGCATGATTGTGTAAAGTCCTTGCTGCAACCTTCAACTAAAGACAAGAAATCAACAGATAGCACCGAAGGGACAAAGTTTTTTAGAAGCTTCAGGACAGCTTTTGTCTACAAGAATCCATCAGGAGATCGCGGCCTCAATTGGCTCATAAATTTGAGATCTCTCATAAATTTGAGATCTCTTGACCTTACTGGTACTTGCATTAGGTACATACCGAAGTCACTAGAACATCTACATCACCTTAGGCTCTTAAACCTCTCACTGACACAAGTTTTAGAGCTTCCGGAATCTATTGAGAGCCTCAGCAACCTGCAGTTCTTGATACTTCGGTGTTGCTATTGGCTCGAAACCCTGCCAGAGGAAATTAGTAATCTGGTCAGCTTGCGGAGCCTTGATTTGGAAGGGACTACACCACATATAGTTCTGTCAAGATTATCAGCCCTGGAGCAGCTAACTGCACTGCATGGTTTCATAGTAGACCACAATGCGGCAGTACCCGACAATGATCATCAGAACGGATGGCCTATGAAAGAGCTGAGTCCTTTGAACTCATTGCGGAGCCTGCAGATAATGGGCATCGATAGAGTTCCAGATGAATCTAGGGCGCAAGAAGCTAACCTAGCAAGCAAGTCTCACCTCACACATCTTGAGTTATGTGGTAGTAGCACCAGTGATTCACAAGTCTTTGTACCAGAGGAAGAACAAGATAGATGGCTCAGTGTGCTTTGCGGTCTCCAACCTCCACAATGCTTGGAATATCTCAAAATAGCGAGCTATTATGGATCATCTCTTCCGGATTGGATATTGCAACTTCGAAACCTCCAGCGGCTTGTGCTTACCGATTGCAAACTCTGTGATAGCCTCCCAGCATTGGGGCAGCTACAACAACTGAAGTTCCTCACAATCAATGGATGTCCTAAGTTACGCATCATCGAGTGGCGGACTGGTGCTACGACTAAACTGGTATTTCCAAAGCTAGAGCAGCTGGACCTCAGGGACATGCAGGCCTTGGAATCATTGGATAGGTTTAAACATGGTGACCTGCTTTCCCTGACCAAATTTCACCTAGAGAACAGTCCCAAATTGAGATCCCTCCCATCTGGCCTTGGTTACTGCAAGGTACTGACAAGTATGAAGATTGTTGGTGCTGATAGCCTCCAAGTGATTGACAACCTTCCTATGCTCAAGGAATTGGTTGTCCAAGACTGCAGAGAACTTGTCATGATCTCAAATCTTCCAGTGCTTCAGGTCCTGGTAGTCGTTGACTGCTCCATGCTGCAAGATTTGAGGGGAGTTGCAGGCCTAAGGCATGTCCGCCTCGTGGACAGAGTGACGAAAGAACTTCCAGATTGGTTGACAGGCCATGAGGCTCCTCTGCTGCAAACATTCACCATAGTCGGCACGACAGAACTACTCAGGAAGTTAGTTCCCAACAGCAAAGGCTGGTCGGCTATACGTAACATGGACAGAGTTTATGCAAATTTGCCTGATGGGGCCCCGTTCTTGGCTTACAACAAGGGCAGACCTGATTTTCAAATGATTAAGACAGCGGTTGGCCCTCAGTTGGAAGATCGTCCTTCTGCATATATTATCCTCAGAAAGCTTGTCAGGATGGCCTCACAAACTGGCCTTCTGGATAGCTTAAAACGGTATTTCCTCCCTCCACTTGCCATTGTTCTTGTACTCTTGCTGCTGGCAACCAGAGACTTCACGCTCATTGGAATCTTGCTCGCCTTCTTTGCGGCAATAGCATGCCTTGCTGGGTTTTATTATATATATATTCAGAAAGCTTCAGGGTGA
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| Protein seq | MAVRRAPLPVGPRAAADGNPAPPGESSKGPGLDGEFRQLVDIADEGVKLVNDAELRLKKRACDNPKDLAAWLRRLQSAKEDLDDALDEFRASMAAQRRRPEQDQERKKSIRHWFSRSSANHEVDKKMKITTEKLNKKFHGILQNGRELGLQPIKLQRHSRISEFPGDLSPQYTLVGDIEQEKLKLINKLTGSESTSAVIAIFGLGGIGKTMLARKVHDDLLTESAFSTVVWVNGSKSFTKKKLLRAILSSSGGKPGEAKKKSNEQIEDMLVTILGAKKFLLVLDDVWADQIHQDFLKVSLQAQQGSRILLTTQDEGVLRQIASDDIHKVNKLSFPDCWSLLCSSACLDEQDCDALTDIGITIIQKCNKVPLAIKVLGGLLGTKNPRREEWQEVISESEGWTLENVPDGMEEICLPIYLAYYSLPYHLKLCFDYCLQLPEGFVIRPQIVTQLWIAEGFIREQDNRNPEDIAEQYYKELVLRNLLQPEIGCFDMSKCTVHDCVKSLLQPSTKDKKSTDSTEGTKFFRSFRTAFVYKNPSGDRGLNWLINLRSLINLRSLDLTGTCIRYIPKSLEHLHHLRLLNLSLTQVLELPESIESLSNLQFLILRCCYWLETLPEEISNLVSLRSLDLEGTTPHIVLSRLSALEQLTALHGFIVDHNAAVPDNDHQNGWPMKELSPLNSLRSLQIMGIDRVPDESRAQEANLASKSHLTHLELCGSSTSDSQVFVPEEEQDRWLSVLCGLQPPQCLEYLKIASYYGSSLPDWILQLRNLQRLVLTDCKLCDSLPALGQLQQLKFLTINGCPKLRIIEWRTGATTKLVFPKLEQLDLRDMQALESLDRFKHGDLLSLTKFHLENSPKLRSLPSGLGYCKVLTSMKIVGADSLQVIDNLPMLKELVVQDCRELVMISNLPVLQVLVVVDCSMLQDLRGVAGLRHVRLVDRVTKELPDWLTGHEAPLLQTFTIVGTTELLRKLVPNSKGWSAIRNMDRVYANLPDGAPFLAYNKGRPDFQMIKTAVGPQLEDRPSAYIILRKLVRMASQTGLLDSLKRYFLPPLAIVLVLLLLATRDFTLIGILLAFFAAIACLAGFYYIYIQKASG |
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| Function | Disease resistance protein RGA2 [UniProtKB/Swiss-Prot:Q7XBQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_09g0313500 | OsNip_09t0313500-01 | Chr09 | 8510839 | 8516543 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCCGTACGACGAGCGCCGCTGCCGGTGGGACCGAGGGCCGCCGCCGACGGCAATCCGGCGCCGCCGGGTGAGTCGAGCAAAGGCCCCGGCCTTGACGGCGAGTTCCGGCAGCTGGTGGACATCGCCGACGAGGGGGTCAAGCTGGTCAACGACGCCGAGCTGAGGCTGAAGAAGCGGGCGTGCGACAACCCCAAGGACCTCGCCGCGTGGCTCCGGCGGCTCCAGAGCGCCAAGGAGGACCTGGACGACGCGCTCGATGAATTCAGAGCTTCCATGGCGGCGCAGCGGCGGCGGCCGGAACAGGATCAGGAGAGGAAGAAATCGATTCGCCATTGGTTCTCACGCTCATCAGCTAACCATGAGGTTGACAAGAAAATGAAAATCACTACTGAAAAGCTGAATAAGAAATTCCATGGGATCTTACAGAATGGTCGTGAACTTGGCCTTCAACCAATCAAATTGCAAAGACACAGTCGAATATCTGAATTTCCTGGGGATCTCTCACCCCAGTACACTCTTGTAGGAGATATTGAACAAGAAAAGTTGAAGTTGATCAACAAATTGACTGGCAGCGAAAGCACCAGTGCTGTCATTGCAATCTTTGGGTTGGGTGGAATTGGCAAGACTATGTTGGCACGAAAAGTACATGATGATCTCCTCACAGAAAGTGCATTCAGCACTGTTGTATGGGTAAATGGCTCCAAATCTTTCACTAAAAAGAAATTGCTACGTGCAATTCTAAGTTCTTCTGGTGGCAAGCCTGGAGAGGCAAAAAAAAAGAGCAATGAGCAAATTGAGGACATGTTGGTTACAATACTTGGAGCAAAGAAATTCTTACTGGTACTTGATGATGTATGGGCTGACCAGATTCATCAGGATTTTCTAAAAGTTAGCTTGCAAGCACAGCAAGGAAGCCGAATTCTGTTGACTACCCAGGATGAGGGAGTTCTGAGGCAAATTGCTTCTGATGACATCCACAAAGTAAACAAATTGAGTTTCCCCGATTGTTGGTCTCTGCTCTGCAGTAGTGCTTGCCTGGATGAACAGGATTGCGACGCATTAACAGATATTGGTATAACAATTATCCAGAAATGTAACAAGGTTCCATTGGCTATCAAAGTTTTGGGTGGTCTCCTAGGAACAAAGAACCCAAGAAGAGAGGAGTGGCAGGAAGTGATCAGTGAGAGTGAAGGGTGGACTCTTGAGAACGTTCCTGATGGCATGGAGGAAATATGTCTCCCCATCTACTTAGCCTATTACAGTCTGCCATATCATTTGAAATTATGTTTTGATTACTGCTTGCAGCTCCCTGAAGGATTTGTTATTAGGCCACAAATTGTTACTCAGCTATGGATAGCAGAGGGCTTTATTCGAGAACAAGATAACCGCAACCCTGAAGATATCGCAGAACAGTATTACAAGGAATTGGTTCTAAGAAATCTTCTGCAGCCTGAGATTGGGTGCTTTGACATGTCGAAATGCACAGTGCATGATTGTGTAAAGTCCTTGCTGCAACCTTCAACTAAAGACAAGAAATCAACAGATAGCACCGAAGGGACAAAGTTTTTTAGAAGCTTCAGGACAGCTTTTGTCTACAAGAATCCATCAGGAGATCGCGGCCTCAATTGGCTCATAAATTTGAGATCTCTCATAAATTTGAGATCTCTTGACCTTACTGGTACTTGCATTAGGTACATACCGAAGTCACTAGAACATCTACATCACCTTAGGCTCTTAAACCTCTCACTGACACAAGTTTTAGAGCTTCCGGAATCTATTGAGAGCCTCAGCAACCTGCAGTTCTTGATACTTCGGTGTTGCTATTGGCTCGAAACCCTGCCAGAGGAAATTAGTAATCTGGTCAGCTTGCGGAGCCTTGATTTGGAAGGGACTACACCACATATAGTTCTGTCAAGATTATCAGCCCTGGAGCAGCTAACTGCACTGCATGGTTTCATAGTAGACCACAATGCGGCAGTACCCGACAATGATCATCAGAACGGATGGCCTATGAAAGAGCTGAGTCCTTTGAACTCATTGCGGAGCCTGCAGATAATGGGCATCGATAGAGTTCCAGATGAATCTAGGGCGCAAGAAGCTAACCTAGCAAGCAAGTCTCACCTCACACATCTTGAGTTATGTGGTAGTAGCACCAGTGATTCACAAGTCTTTGTACCAGAGGAAGAACAAGATAGATGGCTCAGTGTGCTTTGCGGTCTCCAACCTCCACAATGCTTGGAATATCTCAAAATAGCGAGCTATTATGGATCATCTCTTCCGGATTGGATATTGCAACTTCGAAACCTCCAGCGGCTTGTGCTTACCGATTGCAAACTCTGTGATAGCCTCCCAGCATTGGGGCAGCTACAACAACTGAAGTTCCTCACAATCAATGGATGTCCTAAGTTACGCATCATCGAGTGGCGGACTGGTGCTACGACTAAACTGGTATTTCCAAAGCTAGAGCAGCTGGACCTCAGGGACATGCAGGCCTTGGAATCATTGGATAGGTTTAAACATGGTGACCTGCTTTCCCTGACCAAATTTCACCTAGAGAACAGTCCCAAATTGAGATCCCTCCCATCTGGCCTTGGTTACTGCAAGGTACTGACAAGTATGAAGATTGTTGGTGCTGATAGCCTCCAAGTGATTGACAACCTTCCTATGCTCAAGGAATTGGTTGTCCAAGACTGCAGAGAACTTGTCATGATCTCAAATCTTCCAGTGCTTCAGGTCCTGGTAGTCGTTGACTGCTCCATGCTGCAAGATTTGAGGGGAGTTGCAGGCCTAAGGCATGTCCGCCTCGTGGACAGAGTGACGAAAGAACTTCCAGATTGGTTGACAGGCCATGAGGCTCCTCTGCTGCAAACATTCACCATAGTCGGCACGACAGAACTACTCAGGAAGTTAGTTCCCAACAGCAAAGGCTGGTCGGCTATACGTAACATGGACAGAGTTTATGCAAATTTGCCTGATGGGGCCCCGTTCTTGGCTTACAACAAGGGCAGACCTGATTTTCAAATGATTAAGACAGCGGTTGGCCCTCAGTTGGAAGATCGTCCTTCTGCATATATTATCCTCAGAAAGCTTGTCAGGATGGCCTCACAAACTGGCCTTCTGGATAGCTTAAAACGGTATTTCCTCCCTCCACTTGCCATTGTTCTTGTACTCTTGCTGCTGGCAACCAGAGACTTCACGCTCATTGGAATCTTGCTCGCCTTCTTTGCGGCAATAGCATGCCTTGCTGGGTTTTATTATATATATATTCAGAAAGCTTCAGGGTGA
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| Protein seq | MAVRRAPLPVGPRAAADGNPAPPGESSKGPGLDGEFRQLVDIADEGVKLVNDAELRLKKRACDNPKDLAAWLRRLQSAKEDLDDALDEFRASMAAQRRRPEQDQERKKSIRHWFSRSSANHEVDKKMKITTEKLNKKFHGILQNGRELGLQPIKLQRHSRISEFPGDLSPQYTLVGDIEQEKLKLINKLTGSESTSAVIAIFGLGGIGKTMLARKVHDDLLTESAFSTVVWVNGSKSFTKKKLLRAILSSSGGKPGEAKKKSNEQIEDMLVTILGAKKFLLVLDDVWADQIHQDFLKVSLQAQQGSRILLTTQDEGVLRQIASDDIHKVNKLSFPDCWSLLCSSACLDEQDCDALTDIGITIIQKCNKVPLAIKVLGGLLGTKNPRREEWQEVISESEGWTLENVPDGMEEICLPIYLAYYSLPYHLKLCFDYCLQLPEGFVIRPQIVTQLWIAEGFIREQDNRNPEDIAEQYYKELVLRNLLQPEIGCFDMSKCTVHDCVKSLLQPSTKDKKSTDSTEGTKFFRSFRTAFVYKNPSGDRGLNWLINLRSLINLRSLDLTGTCIRYIPKSLEHLHHLRLLNLSLTQVLELPESIESLSNLQFLILRCCYWLETLPEEISNLVSLRSLDLEGTTPHIVLSRLSALEQLTALHGFIVDHNAAVPDNDHQNGWPMKELSPLNSLRSLQIMGIDRVPDESRAQEANLASKSHLTHLELCGSSTSDSQVFVPEEEQDRWLSVLCGLQPPQCLEYLKIASYYGSSLPDWILQLRNLQRLVLTDCKLCDSLPALGQLQQLKFLTINGCPKLRIIEWRTGATTKLVFPKLEQLDLRDMQALESLDRFKHGDLLSLTKFHLENSPKLRSLPSGLGYCKVLTSMKIVGADSLQVIDNLPMLKELVVQDCRELVMISNLPVLQVLVVVDCSMLQDLRGVAGLRHVRLVDRVTKELPDWLTGHEAPLLQTFTIVGTTELLRKLVPNSKGWSAIRNMDRVYANLPDGAPFLAYNKGRPDFQMIKTAVGPQLEDRPSAYIILRKLVRMASQTGLLDSLKRYFLPPLAIVLVLLLLATRDFTLIGILLAFFAAIACLAGFYYIYIQKASG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.494890 | 0.813071 | 1.376464 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0372700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g14410 | RBH | 0.325649 | 0.532117 | 0.344777 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0313500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0005100 | RBH | 0.166743 | 12.563477 | 1.272374 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0005130 | RBH | 0.218925 | 0.638303 | 0.451595 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0005320 | RBH | 0.615255 | 4.990569 | 2.743345 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0005120 | RBH | 0.058342 | 0.088418 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0005330 | RBH | 2.560564 | 7.514806 | 4.913474 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0151700 | RBH | 2.129911 | 10.453731 | 0.8672405 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0005490 | RBH | 0.118735 | 0.480715 | 0.099937 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0134700 | RBH | 1.353095 | 3.6818445 | 1.4673735 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0005350 | RBH | 0.034706 | 0.072241 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0005260 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0005220 | RBH | 0.0 | 6.264716 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0005110 | RBH | 0.372375 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0005160 | RBH | 0.021915 | 1.258319 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G005440 | RBH | 0.364025 | 0.516704 | 0.175717 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0005280 | RBH | 1.206663 | 6.946583 | 1.282153 |
