Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_08g0111300 | OGI:08001520 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr08:594453-598038 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATAAATAAATTATCTATTGCTAGACAATAGATAAAATCTGTCCTTTCCTTCAACAGAAATTACAACCAATTAATTATCACAAAATTGTTTGCGCAAATCCAAATAAAATGTAACTAACATAGGATGGAAAATAAGACAAATATTAACTCCACCAACAAACAAATTATTCAGATAGTAATCCTATCAGTAAATATTCATCCAAAGTTAACGAAAATTGATATGACCATTGTATCCATGATTTTGCATGCAAGAGGAATGGATTACATCTTCTCGTCACATCTTTGTTGATTGGGCTAAAGCCGAAATTAATATATTTCCCTAAAGAGCACCTGCATATAAGATTTAGTTGGAATTTTATCAAACCATAGAGTCCAGCATAAAATAGAGGTTCATATTAATATAAGTTTTTTTTTGTTTTTGTCAATGCCAACAAGCCAACTTTCAAAAATATAGGAGAAACTACCTATGTATTGCTTTCATGCCAAAGGAAAAAAGGCAGTTCTGCCAAGAAATTCAGAAAAACAGTAATAAGTAAAGAATAGATGCTGCATAGTTTCCTCATGCATACAATTAACTATATACTCCCCCGTCTCAAAATATAAGTATTTTTGGACCTCGACCTAGTCTTCGAAATGCTACCTTGACCAACAGTATCTATAAGAATAAAATATTTTAAATAAAAAGAGTTGCATATTATAATAGTTTGATTAATGATAAATCTAGTAACATCAATTTTATATGATTGATTTTTTTATTTTTTTTGCTATTAATAGTTAAAATTACAAATGGTTGACTTGGCACTATGCTAAACATGCGTATATTTTGGGACGGAGGGGTATATGTTTAACAGCATATTAATGTGATATTATTGGAATAGGAACGGCCTGTCGGTACCAGAGTATTCCATTCCAATAGCTAAACCGGGATAATTGTCTAAAATAGAATTGATTGGTGTACATAGAGGACCAACAAATTTGACCATTTCGAGATAAGCCAGATGTGGTGGTGGCACTATATAAAGAGGCAATGACTAATGACCAAACAAATTCATGACGACATACGCGGTTAGACCTGATCCATGAGTTGACGCCATTACGAGCAGCATGGCCAGTCTCCCATATTTAGTGTTTTATTACTGTATTAATTATAATTTAATACTGCTCTATGGACCATCATCACTGTAGTACTGAAATTTCTGACGCTACCAGCCAACTGAAAAAAAAATCCAAACAGCTACTCCCTCCGTTTTATAATATAAGACTTTCTAGTATTGCTTATAGATACACATATATGTCTAGATTCATTAATATCTATATTAATATAAACAATGCTAAAAAGTCTTATATTGTAGAACGGATGAGGTACGTAGGAGTAGCAAATAAGACATGAGACGCAGTGCTATATATATATCAACTTGTCAAGTTGATGCATGCCCATTTAAAGTATTCACCCATGTAGAGAAGAATTAGAGGCACCTAGCTACTCACATCTAGACACATAAATACTCCAAATATATTGGAGGTCACATGTTATGTTTTTTGTTACATGGAAGACATATACATATACAAACTTAAGAAATGCGCGATAGCAGACGTTCAAATAAACGGAGATCATGGTAAATTCTAACCTCACTAAAATTCATATTGAAAAGTACGTCCTACTAAACACGCATGCTTGTGTATACGAAGCTAGACATTGATTATCTGATAAGTCGATCTCTAAGTTTTCAGGAGCCTAATACTCTACCCAAATGATCAAACCAACAAAAGTTCACTACCAAAATATACATTCAAAAGATTGAAAGCGTAGTAACTTCTATAACACCAAATTTATTTTATTAGATTCAATTGAATATATTTTACAGTAAATTTATTCAGTATTAAAAATGTTACTATATTTCTCTATAATCTAGTCAAACTTATGAAATTTTACTTCAAACAAAAGAAAACAAAACACCTTACACTATGAGTACTGAAGCAGAGAGTGACTCGGAGAGTACCAAAATTTTGTTAGTAATAAGGTGTTTTGACATGATATACGAGAGGTGGAATGGAAATGAGTGGACAAAATATAGAGTTACCATATTTTGGTAGAGCAATGAAGTTTAATCACGATGAGGGGAGGGTGACGGCGTCCATGAACTCCTCGTCGGCGACGAGCCTCCGGAGCGCGTCCGGCGCGATGCAAACCTCGAGCGACATGCTCCCGGCGCCGTCCGGGCCCTCGAACACCGTCGCCTTCCCGTCGATCTTGTTCCCGGCGCCGCTCCTCACCGCCACCGGCCTTCCCCACCCGAAGTCGTTGCCGAACACGTCGAACCGCGGCGAGCTCCCCGTGATCAGCGCCACGCCGCCGGCATCGCCGGATTGCAGCTTCGACATGTACGTGAACTCCGGCTCCCGCACCCACCGCTCCAGCGACTCCCTCATGCCGGCCTCGTCGAACGACGCCACGGCGCGGTTCAGCTGCCATGCCGTCCACCCGAGCCCCTTCTCCTCGATCTCGCCGGCCGTCGCCTCCGCCTTCCCGAACATCAGCGCGTTCCCGACGTACCCCGCCGGGATGCCGTTCACGCGCCCCCGGCATCCCACCATCACCGTGTAGAACGTCACCTGCTCCGGCGGGAGTCGCCGGGCGCGGCACACACCTCGCCACAGGTGGGCGAGCACGGCCTGGAGCGACGAGATGGTTGACGTGGCCGCGCCGGACATCTCGTCGTTCGCCTTCGCCTTGAGCTTCCGGGCGCTCGTTGCCGAGAAGGTGAAGAAGCATTCCTGCACTTCCGGCCGCTCGAGCCGTCGGACGATGTGCTGCAGCTTGCCGACCGGCATGGGGATCGGCACCGGGCTGGTCTCGACGAACCACCGCCGGAACACCGGCGCCGGCGTGGAGATCTCTCTGATCATCAGGTCGTCGCTCATGGCGCCGCCAGCGCGGCGGTTGATCTCCGACCATGCGTTCATGAACTTCCAGAAGGTGGTGCCGTCGCCGACGGAGTGGTTCAGCGACATGCCGACGAACACGCCGTCGGCGAGCTCGGTGACCTGCGTCGACAGCACGGGCCGCGACTCGGTGGCGGCGTCGGCGCCGAGCACCAGGTTGTACGAGTAGAACGACCATACCTCCGGCGGCGTGTAAAGCGACGAGACGACGTCGGACACGGCCACGCCGGGCGCCGCCGCGTGGACGAACTCGGCGCCCTCGCCGGTGCACCGCAGCGCGACGGTGACGGTCCCGTCGTCGGCGCGCTCCTCGGCGACGAGACGGCCGGCGAACGGGTAGAACAGCGCGAGGGCGCGCGCGAAGGAGGACGCGAGGGCGTCGGCGAGGCGGTCGCCGGAGAGCGGCGGCTTGGGCAGGAGGACGCCCTTCTGGATGTAGTCGATGCTGAGGAAGCGGAGGTCCCACGGCGTGAGGTGGATGTCGCACGGCGGCGCGTGACCGGACGACGACGACGACGACGACGACGACGGCCGGACGAGGCGTCGGGACAGGACCCGGACACGGTCAACGGCGAGAGCTACGTTCCGGTGGTCATTGCTTCCCATGTCACGCTGCTCTCTTCTCTTGTAATCCGTACGCCTCT
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| CDS seq | ATGGGAAGCAATGACCACCGGAACGTAGCTCTCGCCGTTGACCGTGTCCGGGTCCTGTCCCGACGCCTCGTCCGGCCGTCGTCGTCGTCGTCGTCGTCGTCGTCCGGTCACGCGCCGCCGTGCGACATCCACCTCACGCCGTGGGACCTCCGCTTCCTCAGCATCGACTACATCCAGAAGGGCGTCCTCCTGCCCAAGCCGCCGCTCTCCGGCGACCGCCTCGCCGACGCCCTCGCGTCCTCCTTCGCGCGCGCCCTCGCGCTGTTCTACCCGTTCGCCGGCCGTCTCGTCGCCGAGGAGCGCGCCGACGACGGGACCGTCACCGTCGCGCTGCGGTGCACCGGCGAGGGCGCCGAGTTCGTCCACGCGGCGGCGCCCGGCGTGGCCGTGTCCGACGTCGTCTCGTCGCTTTACACGCCGCCGGAGGTATGGTCGTTCTACTCGTACAACCTGGTGCTCGGCGCCGACGCCGCCACCGAGTCGCGGCCCGTGCTGTCGACGCAGGTCACCGAGCTCGCCGACGGCGTGTTCGTCGGCATGTCGCTGAACCACTCCGTCGGCGACGGCACCACCTTCTGGAAGTTCATGAACGCATGGTCGGAGATCAACCGCCGCGCTGGCGGCGCCATGAGCGACGACCTGATGATCAGAGAGATCTCCACGCCGGCGCCGGTGTTCCGGCGGTGGTTCGTCGAGACCAGCCCGGTGCCGATCCCCATGCCGGTCGGCAAGCTGCAGCACATCGTCCGACGGCTCGAGCGGCCGGAAGTGCAGGAATGCTTCTTCACCTTCTCGGCAACGAGCGCCCGGAAGCTCAAGGCGAAGGCGAACGACGAGATGTCCGGCGCGGCCACGTCAACCATCTCGTCGCTCCAGGCCGTGCTCGCCCACCTGTGGCGAGGTGTGTGCCGCGCCCGGCGACTCCCGCCGGAGCAGGTGACGTTCTACACGGTGATGGTGGGATGCCGGGGGCGCGTGAACGGCATCCCGGCGGGGTACGTCGGGAACGCGCTGATGTTCGGGAAGGCGGAGGCGACGGCCGGCGAGATCGAGGAGAAGGGGCTCGGGTGGACGGCATGGCAGCTGAACCGCGCCGTGGCGTCGTTCGACGAGGCCGGCATGAGGGAGTCGCTGGAGCGGTGGGTGCGGGAGCCGGAGTTCACGTACATGTCGAAGCTGCAATCCGGCGATGCCGGCGGCGTGGCGCTGATCACGGGGAGCTCGCCGCGGTTCGACGTGTTCGGCAACGACTTCGGGTGGGGAAGGCCGGTGGCGGTGAGGAGCGGCGCCGGGAACAAGATCGACGGGAAGGCGACGGTGTTCGAGGGCCCGGACGGCGCCGGGAGCATGTCGCTCGAGGTTTGCATCGCGCCGGACGCGCTCCGGAGGCTCGTCGCCGACGAGGAGTTCATGGACGCCGTCACCCTCCCCTCATCGTGA
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| Protein seq | MGSNDHRNVALAVDRVRVLSRRLVRPSSSSSSSSSGHAPPCDIHLTPWDLRFLSIDYIQKGVLLPKPPLSGDRLADALASSFARALALFYPFAGRLVAEERADDGTVTVALRCTGEGAEFVHAAAPGVAVSDVVSSLYTPPEVWSFYSYNLVLGADAATESRPVLSTQVTELADGVFVGMSLNHSVGDGTTFWKFMNAWSEINRRAGGAMSDDLMIREISTPAPVFRRWFVETSPVPIPMPVGKLQHIVRRLERPEVQECFFTFSATSARKLKAKANDEMSGAATSTISSLQAVLAHLWRGVCRARRLPPEQVTFYTVMVGCRGRVNGIPAGYVGNALMFGKAEATAGEIEEKGLGWTAWQLNRAVASFDEAGMRESLERWVREPEFTYMSKLQSGDAGGVALITGSSPRFDVFGNDFGWGRPVAVRSGAGNKIDGKATVFEGPDGAGSMSLEVCIAPDALRRLVADEEFMDAVTLPSS |
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| Function | Uncharacterized acetyltransferase At3g50280 [UniProtKB/Swiss-Prot:Q9SND9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_08g0111300 | OsNip_08t0111300-01 | Chr08 | 594453 | 598038 | - | RAP2018-11-26 | ||
| CDS seq | ATGGGAAGCAATGACCACCGGAACGTAGCTCTCGCCGTTGACCGTGTCCGGGTCCTGTCCCGACGCCTCGTCCGGCCGTCGTCGTCGTCGTCGTCGTCGTCGTCCGGTCACGCGCCGCCGTGCGACATCCACCTCACGCCGTGGGACCTCCGCTTCCTCAGCATCGACTACATCCAGAAGGGCGTCCTCCTGCCCAAGCCGCCGCTCTCCGGCGACCGCCTCGCCGACGCCCTCGCGTCCTCCTTCGCGCGCGCCCTCGCGCTGTTCTACCCGTTCGCCGGCCGTCTCGTCGCCGAGGAGCGCGCCGACGACGGGACCGTCACCGTCGCGCTGCGGTGCACCGGCGAGGGCGCCGAGTTCGTCCACGCGGCGGCGCCCGGCGTGGCCGTGTCCGACGTCGTCTCGTCGCTTTACACGCCGCCGGAGGTATGGTCGTTCTACTCGTACAACCTGGTGCTCGGCGCCGACGCCGCCACCGAGTCGCGGCCCGTGCTGTCGACGCAGGTCACCGAGCTCGCCGACGGCGTGTTCGTCGGCATGTCGCTGAACCACTCCGTCGGCGACGGCACCACCTTCTGGAAGTTCATGAACGCATGGTCGGAGATCAACCGCCGCGCTGGCGGCGCCATGAGCGACGACCTGATGATCAGAGAGATCTCCACGCCGGCGCCGGTGTTCCGGCGGTGGTTCGTCGAGACCAGCCCGGTGCCGATCCCCATGCCGGTCGGCAAGCTGCAGCACATCGTCCGACGGCTCGAGCGGCCGGAAGTGCAGGAATGCTTCTTCACCTTCTCGGCAACGAGCGCCCGGAAGCTCAAGGCGAAGGCGAACGACGAGATGTCCGGCGCGGCCACGTCAACCATCTCGTCGCTCCAGGCCGTGCTCGCCCACCTGTGGCGAGGTGTGTGCCGCGCCCGGCGACTCCCGCCGGAGCAGGTGACGTTCTACACGGTGATGGTGGGATGCCGGGGGCGCGTGAACGGCATCCCGGCGGGGTACGTCGGGAACGCGCTGATGTTCGGGAAGGCGGAGGCGACGGCCGGCGAGATCGAGGAGAAGGGGCTCGGGTGGACGGCATGGCAGCTGAACCGCGCCGTGGCGTCGTTCGACGAGGCCGGCATGAGGGAGTCGCTGGAGCGGTGGGTGCGGGAGCCGGAGTTCACGTACATGTCGAAGCTGCAATCCGGCGATGCCGGCGGCGTGGCGCTGATCACGGGGAGCTCGCCGCGGTTCGACGTGTTCGGCAACGACTTCGGGTGGGGAAGGCCGGTGGCGGTGAGGAGCGGCGCCGGGAACAAGATCGACGGGAAGGCGACGGTGTTCGAGGGCCCGGACGGCGCCGGGAGCATGTCGCTCGAGGTTTGCATCGCGCCGGACGCGCTCCGGAGGCTCGTCGCCGACGAGGAGTTCATGGACGCCGTCACCCTCCCCTCATCGTGA
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| Protein seq | MGSNDHRNVALAVDRVRVLSRRLVRPSSSSSSSSSGHAPPCDIHLTPWDLRFLSIDYIQKGVLLPKPPLSGDRLADALASSFARALALFYPFAGRLVAEERADDGTVTVALRCTGEGAEFVHAAAPGVAVSDVVSSLYTPPEVWSFYSYNLVLGADAATESRPVLSTQVTELADGVFVGMSLNHSVGDGTTFWKFMNAWSEINRRAGGAMSDDLMIREISTPAPVFRRWFVETSPVPIPMPVGKLQHIVRRLERPEVQECFFTFSATSARKLKAKANDEMSGAATSTISSLQAVLAHLWRGVCRARRLPPEQVTFYTVMVGCRGRVNGIPAGYVGNALMFGKAEATAGEIEEKGLGWTAWQLNRAVASFDEAGMRESLERWVREPEFTYMSKLQSGDAGGVALITGSSPRFDVFGNDFGWGRPVAVRSGAGNKIDGKATVFEGPDGAGSMSLEVCIAPDALRRLVADEEFMDAVTLPSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.272889 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0111500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g01950 | RBH | 0.0 | 0.183241 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0111300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0000830 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0000840 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0000840 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0000860 | RBH | 0.0 | 0.065323 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0000820 | RBH | 0.0 | 16.202110 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0009600 | RBH | 0.1200625 | 12.4310435 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0000780 | RBH | 0.0 | 1.165644 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0010100 | RBH | 0.161706 | 30.232827 | 0.025112 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0000900 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0000820 | RBH | 0.0 | 3.174171 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0000840 | RBH | 0.0 | 32.290623 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0000830 | RBH | 0.0 | 0.851313 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0000830 | RBH | 0.0 | 3.703607 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G000850 | SBH | 0.0 | 8.750555 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0000840 | RBH | 0.000000 | 16.143566 | 0.0 |
