Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0679700 | OGI:07078660 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:28786433-28793041 | ||||||||
| Gene Symbol | OsVAL2, VAL2, DLN195, OsDLN195 | ||||||||||
| DNA seq | AGAGCGGCAAATCAGGTGAGTTATTACTGGATGTCTTGGCTTTGGATACATACAACAACTAGCTGCCCACCGAGGTATGAGCAAATAAGGTGAGCCTCGTGGTTAAAAATTACAAGGTACAGTCAGTATCATACAGCCTTCTACACGTGTGTTTACACAAGAAAGCAAGTGAAGGACTACAAGAACACAATGAAACCCTATGAGATTCTCAACATCAAAACTCACCAGCTGCTGTTCCTGTAAAAAAAGGGGGAAGCCGATAAGATGCACACACAACAAATTCAATACCCATCCTGCCATCCACACACTCAACACGGTCAGCCTCAAGCTCAAGCTAAAGCAGCAGCAGAGTCACCGGCAGCCTTGTCCGGCTGGTTATCTCCAGCCTCGTCGACGGCCATGCTCTCCGGCTGCTCTGCCGTCGCCACACGCCCGCCGTCGTTGTTGGACGTCCGCTCTTCGCTCTCCACCAGAGCCGGCTGCGGAACCGTGGCTGCACCTGTACATGTGCTGGAGCTCCCTTGCTCCCCAGCCAAGCTCGTCAGGCCGTTCTGCTTCATGTAGTTCTCCAGTGGCCGGTTGGCCACCTCCAGGAGGCTGACCATGCTCACCCGAGGCTGCCCGCCATGCCGCTCCTCGTCTCGGACGGCAGTAGGGTGGAAGTTCAGGTCTATGTGGCCCTTGTTGATGTCAACCTTGTCGAACATGGTCACATCTCCGTCTCGGGTAGTGTCAACCGTCTGTGGGGATCTTGACAGGCTGCTTCCCTCAGGCTCATCTCTGTTCATCCAAGCGATCTTCTTGCTCGCCTCGGCCTCCTCTCGCTCCGACTGCCGTTGCTTCTTCCTCATCATCAGTGTCTTGAAGCGACGCCTAACGGTCATGCAGACATTGCAGGTGCAAGCTGGGTTGTGCTTCGGGCCCTTCCCGCTAGGTGGCTGGATACACACTATGCAGGTGCAGCCAGGGCGATGCCGGGGGTGCTTTGTGGTTGTCGCAACAGAAGGGGAACCTTGGTTCCCGACATCACCATAGACTGCGGCAGTGGCAAAGGCATCAAGGCTGACCGCATCCATTTCGGGGATGTTCTGCTTAAAACCAAAGCTGTTCCTTCGCCTCCTCATATCTGTGGTAATATTCAAGTTATTGATTTTTCTTTTTTTTTTTTACAAGTTTGTCACCAGAAATGATGCAGTATGTGCTACCCAGTCCCTATATACTTGTTATCAATTTCAATTGTGATAAGAGATGCCTATTATACCAGACTATCCATGTTTTATTTGCCCACTATCATGCTATATGCTATATGCAGGTTCTTTTTTCCTAGAATGATGTAACATGTCCTGAAATGCACGAAATTCCTTTTAAATAAAGTCAGAGCCTCCAAATGTCCATTATGGCATGCCCAGAGCATCTTGCTATCAAGGCGTGCATATGAAAAGCATGGATACCTTCGTATTGCTGAAGAACAATGTGCAATTCTTTGGGGGTTAATTCTTCAGGTGCAGAGCAGGAACAGCTGCAAATATGTTGGAAATAATTTTAGTTAGCTAATCATGATGTACAATGAACAGTTCTATCAAATGACGAAAGTGTGGCTAGAATGTTTTTCCACAAACAGCATACCTTTTTGAGTCGATTGTGTTGTCAGCACATGTCCACTTGGATGCAACAATAACATTAAGTGGTAACCGGCGCCATTTTGAGCAATCATCACATTGAATCCATTGATCTTGTTCCCTAAAAAATACACAGTAAGGTATTGGCAAAAATTAGTCACTGGCACAGAGAATATTTGTATGGTGTCTATGCAGAGGGCAAACCCTTTAAAATGATATCAATACCATACAGCTCCAAGGCAATATCTATTGAAATCTAAACAATCGCTTAATATTTTTGTTGTTTTATTTCCACCACTTATGGTTTTCCTCATGATGAAAACTAGAGTACTAAACGGTATCTTCTGAATAAGGTTCTTACCCAGTAGAACGGATGGTAAAAATTGATCTCTTTGCAAACACAGGGGGTTCCTGCATATGTATAATATAGTTAGATTAAATTCAATCATTCCAAGGCCTCTCCTGAGGGCTGAGAAAAAAGAAGTCAGAATTTCATGTTTCCCACAAACGTGAATAATGAAATGGCCAGCAAACTTACATCATACTCTTCAATTTCGTAGTCCTCAATCATCACGACAGTAGGTTTTGCAGTTGGAGCAGGACGCAACAGCTCCTGAACCTCATCCCAGTAAAGCTTTAGTTCCCAGGCTTCTTCAGCATCCATTGAAAGCCTCCTGCTTTTGGAACCAATATTGCGGCCTCTCTTTAAAAACTGCAAAGACCCCTCATCTGGCCTGCTGCCGAATTTATCTGTCTTAAGCCAACTAACATCCCCGTCAGCTGAGTTCACATGATGATCGTATATAGAGCTTGTATGGAGATCTGCAGCCCCCTTTATTGACTGAAGAAATCCTGAATAACCACTTACTATTGCTAAATTCTCATTTGTACTAGAAAATAATGTATCCCCAAGAATGGAACCGTTGGCAATAGCTGAAATCTGTGAGTCCTGTACAGAAGTAACATAAAAACATTGATAAAGGAAGGGAAAAAGGAAAGTGAAACAAGCATTTGCAGGAAAATAAATTAGTAGGAAGAATGTTAGGAAAATCTAACTTACTGGCAAACTGACAGTGTTTGTGGCCTTCCGGAAGCCCATAACAAGTTTCCCTCCAGGTTCTATCCGACTAAAAGTCACTGAAAAGAAAACAAGAATCACCATTAAGTATGAAAACCTTCCCAGTGAGATCACATTTAATATGGAACAATTCTACTTAGCATGTTTAAATATATTACCACACAAAATTCCTATAACAAGTAAGATATGACCATGAAATATTAATCAGGCATTGAATTTTGACCTAGACGTGACAATTAAATGACTATGGGAGGACCCCTATTTGTCCCTGTCAATTCCATGTGTAGGTCAATTTGTTCTTTCAAATTCTGTACACTCAATTTAGACATTTGTGAATACTTAAGGAGATTCCCCTATCAACTGGCAACTTTACTGCCATGAGTGCTTTCCCAAATAGTTTTGAAGTACTTTTGAACTATGTTAGATCCTTTGAAGGTATGCAATAGGAAAATCATTGCTTATATGTAATCAGGCATCAGTAATAAAATTGTAAAAAAAGAACAGGTGATATCATGTCCAAGGAGATTTAACCTGTATCACCAGCCTGTAATTGTAATGATTGTATGCATGGTGTAACCCCCTCCAAGACATACATTCTGCTGTTGTTATTTGGCCAGAATCTGAACTGAAAATGCCATTCTTTGCCTTTTGCGTCTTGAATTGTCAAAGGACGACCTTCTGGCTGAGAAATTGGAGGGAAATATGCCTACAAAATGTATCTCGGCAACTCAGGATGACAGCAAACATGAAAAGAAATATGTTAAAATAGTTATGCTGAGAAACAATTGTCCCCACTCCCAGTAGTTAGCAACCATTTTGCAAAGAATGTAAAGTAGCAGTGCTCTATTGCAAAATACTGTAACCATGAAAATATTTAAATAAATTATTTATATAAGATTATTGAGCATGTTGGGAACCAAAGAATGTCAAGTAGCATAACAATACTAACAAGTGTAACAATGGCCTAGGTCTCTGTTGATCAGGTATTCTATGTCAGTGTTTACGTGAAGTAGTAAAATTAGGTTCCACATCGGCTGTATTTCTTTCTAGTCCTAACTCTTGTGCATATACTACTATATAATATAGTCACATAGATCTTGTCAAAGCATAATAAAGGTTATTGTTTTTTGTAACATGTGGATGGGAGGGTGTTCCTGATCCTCATTTGTATCAAAGGATCTTTAAATAATAGGGAATATGATACAAAAACGATAAATCAGTAATGAGGTAACAACACTAAAATTTTATTAACAGGAGGCAGAACCACAAAAGGTTGTGAACAAAAAAATACCTCCGCACAGGCTTTTGGTAGAACAAGGCGCCCTATGCGGCCTGCATCACTGGCGCTTAGAACCTTCTCAAACAGGGGGACAATGGTGGAATTTGAACTTGAAGAGAAATATAGTTAAGGAAAACCAAAATAGCATCCAGATCAGAAATAGGTATGCACAATATGAAATAATTCGCCCTGATTGATCAGTTACAGAGATTGTATTATACGCAAAGTATGTTAGCTACTTATGCATAATATCACCAAGAAGTTGATAAATATAATAAGGATACTCTCCAGAAATTTGCTGTAGCTCTTGGTCTGTTATTCTAGGCCAATATCGAGGAAGTAATTGATTGCGGCCCCTACCTTCTGCAGGTGGCCTTGCAACACGAAGATGCGGAAGCATATCTTTCGTTGGATCAAAAACAGCACCTTCACCAACCCTTGGCGGTCTGGTCAGAAAATGACGAGCCCTTTGTGCATGCTGAAATGGAGATAATGCAGTGGTAAGCTCTCTTCCTTCAGGAAATCCTGTTGTTGGTGATAGCATAGGTCTTTCCACAGTTGAAGTAGCCTCCAACTTGTTTCCATTACTAGCAATTCCCAAGCTCATGTTGAGGCATGCCTCAGAAAGTGATTCACTTGTCGTGCTTTCTGTAGTTGGGTCTTTATTTTCATCTCTTCGAGACTCCAATGCACTTTGAGATCTAGTTAGGAAAGGTATCCTTCCCATGTCCCCGATACTAAGGGTAGGTAGTTCCCATTTAATCTGCCTCGCACCATTCTCTAGTTCTTTTTGCCTCAAAATATTACTGCTTTGCCCAGCTTCTACGTTTTTCACCATGAATGGAAGGTTGTTCTTAGCGATAATAGTAAGATCATCGTTTCTGGCATCGACCATAAGGGAGGATGTCTCCAGTGGTCTACCAGACAATAAATCATCGCTTTTGCCAAAAAGTCTCTGGTTATTTTGGGATGAAAAAAGCTTGGGGACGACTGGACTTGGAACCTACAAAAAAAAGGAACAATCAGATAATTTGGAAAAGAAATACAAATATGCAACAAACAAACTTACAGATTGAACTGCTGAATTTTTAATGCAAGTGACACATTGAACTCCACCGCTATCAAGTAGATCAAAGGAGTTCTTCGAAGCAATACATCCACAATGGAGACGCTGGAATAGTGAAGTTCTTTAGAGTTACTGTTGCAGAACAATCTAGCACCAAAAATGTGCATACATTTCACAGCATAGGTCACCATCTCACCTTCCCACAAAATGAGCAGTCCCTCCAGCCAGATTCTTTTTGGTGAAATATATCACAAAACACAAGCTGCTCATATGCCAACCTACATAAAGCATAAATGGCATAATCAAAATAGATAGATCAAGGAAATTGGACTTCAAATTGGTATAGGGGATTAAAGTAACCTCCTTTTCAGAAGAAAACACTCTTTAACCTTATGTTGTTCAACTAAGCATATGTTTTTCTCCATCACCAAAAATCAATTGTAAGAAAAATCAGGTTGCATAACTACACCAATTTCACAATACATCTATTTTTTACCAAGCAGCAATTTTGACAACTCATAGAGCTTTGGCAAACAAATTCCCCCCTTTTTACACCAAAGCGCAGGAAACGTCATCCGGGACAGCAATCCAGTTACAAGTCACCACAAATATAATTTTAATTGTGAGAAGCTCATGTGCAGCAAGTAACTGAACGATCATCGAAATCCCAGTTGAGCATGATGTCCACTCAATTAACTGCTAGCTAATCGCACAACGAGCCATCAAGTCAACCTTCCAAAGTTTCACCGGATTTTCCACTTTCCAAAAATTCTACACGCGCAACACTGTTGCTTCTACCCCGGCACAGTTTCCTCATAAATCAACTAATTTGGGCGCCAATACGAGATCACCACAAATGGTAATGGTAAAAATCACATCAAACAAGTAATAAACACAAGTTGTAGCCGTTGGAAAAACAAATAAATTTAGGGAGAAAAAGAGGGGAAATCATCGAGACGATATACAGGAAACAACCAAAAAAAAAAGAGCACAGCAGCTAATTCATGCAGCCAGCCATTTCAGCCGCGGCGCGTGGACCACCATGGGCGCGCACAGCAAGCTAGCGCGGAGGAGGAGGAACCGAGAGAGGAAGAGGCGGAGGCGTACCCGCACTTGTCGCAGAGCACGGCGAAGCCACCGGATCGCAGCGGCCAGCCCTTCCTCCACTCCCCTCCCGCCGGGGACGGGGCCGGGGCCCCGCACGCGGCGTTCATGCACCTCTTCGCCGCCACCAACGCCGCCGCCGCCGCAGCCATCCCCGCCATGGCCACTCCGATCAATAGAAGAAGAAAAAGAAAAGCTCACCGCATCACCCCACCCACACAGCTCGAGCCTAGTAGAGAGCAGTAAAGATCGAGGCAAGAGGATGATGCGGTGGGTAGGGGAAGCGTAGTTTTCCGGTGGATGTGGAGATGGCACCAAACCAAAACGATCGATCGCTGGCGACTCGGGTGCGGATGCGGGGAAGAAAAGGAAAACCAACCAGATGGGGGGAGCAAGAAGAGGAGACTGAAGAATTACTCCTGCTGCTGATGCTGCAGCAGCCAAGGCGCAGTAAATACTTCAG
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| CDS seq | ATGGCGGGGATGGCTGCGGCGGCGGCGGCGTTGGTGGCGGCGAAGAGGTGCATGAACGCCGCGTGCGGGGCCCCGGCCCCGTCCCCGGCGGGAGGGGAGTGGAGGAAGGGCTGGCCGCTGCGATCCGGTGGCTTCGCCGTGCTCTGCGACAAGTGCGGGTTGGCATATGAGCAGCTTGTGTTTTGTGATATATTTCACCAAAAAGAATCTGGCTGGAGGGACTGCTCATTTTGTGGGAAGCGTCTCCATTGTGGATGTATTGCTTCGAAGAACTCCTTTGATCTACTTGATAGCGGTGGAGTTCAATGTGTCACTTGCATTAAAAATTCAGCAGTTCAATCTGTTCCAAGTCCAGTCGTCCCCAAGCTTTTTTCATCCCAAAATAACCAGAGACTTTTTGGCAAAAGCGATGATTTATTGTCTGGTAGACCACTGGAGACATCCTCCCTTATGGTCGATGCCAGAAACGATGATCTTACTATTATCGCTAAGAACAACCTTCCATTCATGGTGAAAAACGTAGAAGCTGGGCAAAGCAGTAATATTTTGAGGCAAAAAGAACTAGAGAATGGTGCGAGGCAGATTAAATGGGAACTACCTACCCTTAGTATCGGGGACATGGGAAGGATACCTTTCCTAACTAGATCTCAAAGTGCATTGGAGTCTCGAAGAGATGAAAATAAAGACCCAACTACAGAAAGCACGACAAGTGAATCACTTTCTGAGGCATGCCTCAACATGAGCTTGGGAATTGCTAGTAATGGAAACAAGTTGGAGGCTACTTCAACTGTGGAAAGACCTATGCTATCACCAACAACAGGATTTCCTGAAGGAAGAGAGCTTACCACTGCATTATCTCCATTTCAGCATGCACAAAGGGCTCGTCATTTTCTGACCAGACCGCCAAGGGTTGGTGAAGGTGCTGTTTTTGATCCAACGAAAGATATGCTTCCGCATCTTCGTGTTGCAAGGCCACCTGCAGAAGGTAGGGGCCGCAATCAATTACTTCCTCGATATTGGCCTAGAATAACAGACCAAGAGCTACAGCAAATTTCTGGAGATTCAAATTCCACCATTGTCCCCCTGTTTGAGAAGGTTCTAAGCGCCAGTGATGCAGGCCGCATAGGGCGCCTTGTTCTACCAAAAGCCTGTGCGGAGGCATATTTCCCTCCAATTTCTCAGCCAGAAGGTCGTCCTTTGACAATTCAAGACGCAAAAGGCAAAGAATGGCATTTTCAGTTCAGATTCTGGCCAAATAACAACAGCAGAATGTATGTCTTGGAGGGGGTTACACCATGCATACAATCATTACAATTACAGGCTGGTGATACAGTGACTTTTAGTCGGATAGAACCTGGAGGGAAACTTGTTATGGGCTTCCGGAAGGCCACAAACACTGTCAGTTTGCCAGACTCACAGATTTCAGCTATTGCCAACGGTTCCATTCTTGGGGATACATTATTTTCTAGTACAAATGAGAATTTAGCAATAGTAAGTGGTTATTCAGGATTTCTTCAGTCAATAAAGGGGGCTGCAGATCTCCATACAAGCTCTATATACGATCATCATGTGAACTCAGCTGACGGGGATGTTAGTTGGCTTAAGACAGATAAATTCGGCAGCAGGCCAGATGAGGGGTCTTTGCAGTTTTTAAAGAGAGGCCGCAATATTGGTTCCAAAAGCAGGAGGCTTTCAATGGATGCTGAAGAAGCCTGGGAACTAAAGCTTTACTGGGATGAGGTTCAGGAGCTGTTGCGTCCTGCTCCAACTGCAAAACCTACTGTCGTGATGATTGAGGACTACGAAATTGAAGAGTATGATGAACCCCCTGTGTTTGCAAAGAGATCAATTTTTACCATCCGTTCTACTGGGGAACAAGATCAATGGATTCAATGTGATGATTGCTCAAAATGGCGCCGGTTACCACTTAATGTTATTGTTGCATCCAAGTGGACATGTGCTGACAACACAATCGACTCAAAAAGCTGTTCCTGCTCTGCACCTGAAGAATTAACCCCCAAAGAATTGCACATTGTTCTTCAGCAATACGAAGATATGAGGAGGCGAAGGAACAGCTTTGGTTTTAAGCAGAACATCCCCGAAATGGATGCGGTCAGCCTTGATGCCTTTGCCACTGCCGCAGTCTATGGTGATGTCGGGAACCAAGGTTCCCCTTCTGTTGCGACAACCACAAAGCACCCCCGGCATCGCCCTGGCTGCACCTGCATAGTGTGTATCCAGCCACCTAGCGGGAAGGGCCCGAAGCACAACCCAGCTTGCACCTGCAATGTCTGCATGACCGTTAGGCGTCGCTTCAAGACACTGATGATGAGGAAGAAGCAACGGCAGTCGGAGCGAGAGGAGGCCGAGGCGAGCAAGAAGATCGCTTGGATGAACAGAGATGAGCCTGAGGGAAGCAGCCTGTCAAGATCCCCACAGACGGTTGACACTACCCGAGACGGAGATGTGACCATGTTCGACAAGGTTGACATCAACAAGGGCCACATAGACCTGAACTTCCACCCTACTGCCGTCCGAGACGAGGAGCGGCATGGCGGGCAGCCTCGGGTGAGCATGGTCAGCCTCCTGGAGGTGGCCAACCGGCCACTGGAGAACTACATGAAGCAGAACGGCCTGACGAGCTTGGCTGGGGAGCAAGGGAGCTCCAGCACATGTACAGGTGCAGCCACGGTTCCGCAGCCGGCTCTGGTGGAGAGCGAAGAGCGGACGTCCAACAACGACGGCGGGCGTGTGGCGACGGCAGAGCAGCCGGAGAGCATGGCCGTCGACGAGGCTGGAGATAACCAGCCGGACAAGGCTGCCGGTGACTCTGCTGCTGCTTTAGCTTGA
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| Protein seq | MAGMAAAAAALVAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLVFCDIFHQKESGWRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNSAVQSVPSPVVPKLFSSQNNQRLFGKSDDLLSGRPLETSSLMVDARNDDLTIIAKNNLPFMVKNVEAGQSSNILRQKELENGARQIKWELPTLSIGDMGRIPFLTRSQSALESRRDENKDPTTESTTSESLSEACLNMSLGIASNGNKLEATSTVERPMLSPTTGFPEGRELTTALSPFQHAQRARHFLTRPPRVGEGAVFDPTKDMLPHLRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDAKGKEWHFQFRFWPNNNSRMYVLEGVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKATNTVSLPDSQISAIANGSILGDTLFSSTNENLAIVSGYSGFLQSIKGAADLHTSSIYDHHVNSADGDVSWLKTDKFGSRPDEGSLQFLKRGRNIGSKSRRLSMDAEEAWELKLYWDEVQELLRPAPTAKPTVVMIEDYEIEEYDEPPVFAKRSIFTIRSTGEQDQWIQCDDCSKWRRLPLNVIVASKWTCADNTIDSKSCSCSAPEELTPKELHIVLQQYEDMRRRRNSFGFKQNIPEMDAVSLDAFATAAVYGDVGNQGSPSVATTTKHPRHRPGCTCIVCIQPPSGKGPKHNPACTCNVCMTVRRRFKTLMMRKKQRQSEREEAEASKKIAWMNRDEPEGSSLSRSPQTVDTTRDGDVTMFDKVDINKGHIDLNFHPTAVRDEERHGGQPRVSMVSLLEVANRPLENYMKQNGLTSLAGEQGSSSTCTGAATVPQPALVESEERTSNNDGGRVATAEQPESMAVDEAGDNQPDKAAGDSAAALA |
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| Function | B3 domain-containing protein Os07g0679700 [UniProtKB/Swiss-Prot:Q6Z3U3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0679700 | OsNip_07t0679700-01 | Chr07 | 28786471 | 28793002 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGGGGATGGCTGCGGCGGCGGCGGCGTTGGTGGCGGCGAAGAGGTGCATGAACGCCGCGTGCGGGGCCCCGGCCCCGTCCCCGGCGGGAGGGGAGTGGAGGAAGGGCTGGCCGCTGCGATCCGGTGGCTTCGCCGTGCTCTGCGACAAGTGCGGGTTGGCATATGAGCAGCTTGTGTTTTGTGATATATTTCACCAAAAAGAATCTGGCTGGAGGGACTGCTCATTTTGTGGGAAGCGTCTCCATTGTGGATGTATTGCTTCGAAGAACTCCTTTGATCTACTTGATAGCGGTGGAGTTCAATGTGTCACTTGCATTAAAAATTCAGCAGTTCAATCTGTTCCAAGTCCAGTCGTCCCCAAGCTTTTTTCATCCCAAAATAACCAGAGACTTTTTGGCAAAAGCGATGATTTATTGTCTGGTAGACCACTGGAGACATCCTCCCTTATGGTCGATGCCAGAAACGATGATCTTACTATTATCGCTAAGAACAACCTTCCATTCATGGTGAAAAACGTAGAAGCTGGGCAAAGCAGTAATATTTTGAGGCAAAAAGAACTAGAGAATGGTGCGAGGCAGATTAAATGGGAACTACCTACCCTTAGTATCGGGGACATGGGAAGGATACCTTTCCTAACTAGATCTCAAAGTGCATTGGAGTCTCGAAGAGATGAAAATAAAGACCCAACTACAGAAAGCACGACAAGTGAATCACTTTCTGAGGCATGCCTCAACATGAGCTTGGGAATTGCTAGTAATGGAAACAAGTTGGAGGCTACTTCAACTGTGGAAAGACCTATGCTATCACCAACAACAGGATTTCCTGAAGGAAGAGAGCTTACCACTGCATTATCTCCATTTCAGCATGCACAAAGGGCTCGTCATTTTCTGACCAGACCGCCAAGGGTTGGTGAAGGTGCTGTTTTTGATCCAACGAAAGATATGCTTCCGCATCTTCGTGTTGCAAGGCCACCTGCAGAAGGTAGGGGCCGCAATCAATTACTTCCTCGATATTGGCCTAGAATAACAGACCAAGAGCTACAGCAAATTTCTGGAGATTCAAATTCCACCATTGTCCCCCTGTTTGAGAAGGTTCTAAGCGCCAGTGATGCAGGCCGCATAGGGCGCCTTGTTCTACCAAAAGCCTGTGCGGAGGCATATTTCCCTCCAATTTCTCAGCCAGAAGGTCGTCCTTTGACAATTCAAGACGCAAAAGGCAAAGAATGGCATTTTCAGTTCAGATTCTGGCCAAATAACAACAGCAGAATGTATGTCTTGGAGGGGGTTACACCATGCATACAATCATTACAATTACAGGCTGGTGATACAGTGACTTTTAGTCGGATAGAACCTGGAGGGAAACTTGTTATGGGCTTCCGGAAGGCCACAAACACTGTCAGTTTGCCAGACTCACAGATTTCAGCTATTGCCAACGGTTCCATTCTTGGGGATACATTATTTTCTAGTACAAATGAGAATTTAGCAATAGTAAGTGGTTATTCAGGATTTCTTCAGTCAATAAAGGGGGCTGCAGATCTCCATACAAGCTCTATATACGATCATCATGTGAACTCAGCTGACGGGGATGTTAGTTGGCTTAAGACAGATAAATTCGGCAGCAGGCCAGATGAGGGGTCTTTGCAGTTTTTAAAGAGAGGCCGCAATATTGGTTCCAAAAGCAGGAGGCTTTCAATGGATGCTGAAGAAGCCTGGGAACTAAAGCTTTACTGGGATGAGGTTCAGGAGCTGTTGCGTCCTGCTCCAACTGCAAAACCTACTGTCGTGATGATTGAGGACTACGAAATTGAAGAGTATGATGAACCCCCTGTGTTTGCAAAGAGATCAATTTTTACCATCCGTTCTACTGGGGAACAAGATCAATGGATTCAATGTGATGATTGCTCAAAATGGCGCCGGTTACCACTTAATGTTATTGTTGCATCCAAGTGGACATGTGCTGACAACACAATCGACTCAAAAAGCTGTTCCTGCTCTGCACCTGAAGAATTAACCCCCAAAGAATTGCACATTGTTCTTCAGCAATACGAAGATATGAGGAGGCGAAGGAACAGCTTTGGTTTTAAGCAGAACATCCCCGAAATGGATGCGGTCAGCCTTGATGCCTTTGCCACTGCCGCAGTCTATGGTGATGTCGGGAACCAAGGTTCCCCTTCTGTTGCGACAACCACAAAGCACCCCCGGCATCGCCCTGGCTGCACCTGCATAGTGTGTATCCAGCCACCTAGCGGGAAGGGCCCGAAGCACAACCCAGCTTGCACCTGCAATGTCTGCATGACCGTTAGGCGTCGCTTCAAGACACTGATGATGAGGAAGAAGCAACGGCAGTCGGAGCGAGAGGAGGCCGAGGCGAGCAAGAAGATCGCTTGGATGAACAGAGATGAGCCTGAGGGAAGCAGCCTGTCAAGATCCCCACAGACGGTTGACACTACCCGAGACGGAGATGTGACCATGTTCGACAAGGTTGACATCAACAAGGGCCACATAGACCTGAACTTCCACCCTACTGCCGTCCGAGACGAGGAGCGGCATGGCGGGCAGCCTCGGGTGAGCATGGTCAGCCTCCTGGAGGTGGCCAACCGGCCACTGGAGAACTACATGAAGCAGAACGGCCTGACGAGCTTGGCTGGGGAGCAAGGGAGCTCCAGCACATGTACAGGTGCAGCCACGGTTCCGCAGCCGGCTCTGGTGGAGAGCGAAGAGCGGACGTCCAACAACGACGGCGGGCGTGTGGCGACGGCAGAGCAGCCGGAGAGCATGGCCGTCGACGAGGCTGGAGATAACCAGCCGGACAAGGCTGCCGGTGACTCTGCTGCTGCTTTAGCTTGA
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| Protein seq | MAGMAAAAAALVAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLVFCDIFHQKESGWRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNSAVQSVPSPVVPKLFSSQNNQRLFGKSDDLLSGRPLETSSLMVDARNDDLTIIAKNNLPFMVKNVEAGQSSNILRQKELENGARQIKWELPTLSIGDMGRIPFLTRSQSALESRRDENKDPTTESTTSESLSEACLNMSLGIASNGNKLEATSTVERPMLSPTTGFPEGRELTTALSPFQHAQRARHFLTRPPRVGEGAVFDPTKDMLPHLRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDAKGKEWHFQFRFWPNNNSRMYVLEGVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKATNTVSLPDSQISAIANGSILGDTLFSSTNENLAIVSGYSGFLQSIKGAADLHTSSIYDHHVNSADGDVSWLKTDKFGSRPDEGSLQFLKRGRNIGSKSRRLSMDAEEAWELKLYWDEVQELLRPAPTAKPTVVMIEDYEIEEYDEPPVFAKRSIFTIRSTGEQDQWIQCDDCSKWRRLPLNVIVASKWTCADNTIDSKSCSCSAPEELTPKELHIVLQQYEDMRRRRNSFGFKQNIPEMDAVSLDAFATAAVYGDVGNQGSPSVATTTKHPRHRPGCTCIVCIQPPSGKGPKHNPACTCNVCMTVRRRFKTLMMRKKQRQSEREEAEASKKIAWMNRDEPEGSSLSRSPQTVDTTRDGDVTMFDKVDINKGHIDLNFHPTAVRDEERHGGQPRVSMVSLLEVANRPLENYMKQNGLTSLAGEQGSSSTCTGAATVPQPALVESEERTSNNDGGRVATAEQPESMAVDEAGDNQPDKAAGDSAAALA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0679700 | OsNip_07t0679700-02 | Chr07 | 28786433 | 28793041 | - | IsoSeq | ||
| CDS seq | ATGAGCAGCTTGTGTTTTGTGATATATTTCACCAAAAAGAATCTGGCTGGAGGGACTGCTCATTTTGTGGGAAGCGTCTCCATTGTGGATGTATTGCTTCGAAGAACTCCTTTGATCTACTTGATAGCGGTGGAGTTCAATGTGTCACTTGCATTAAAAATTCAGCAGTTCAATCTGTTCCAAGTCCAGTCGTCCCCAAGCTTTTTTCATCCCAAAATAACCAGAGACTTTTTGGCAAAAGCGATGATTTATTGTCTGGTAGACCACTGGAGACATCCTCCCTTATGGTCGATGCCAGAAACGATGATCTTACTATTATCGCTAAGAACAACCTTCCATTCA
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| Protein seq | MSSLCFVIYFTKKNLAGGTAHFVGSVSIVDVLLRRTPLIYLIAVEFNVSLALKIQQFNLFQVQSSPSFFHPKITRDFLAKAMIYCLVDHWRHPPLWSMPETMILLLSLRTTFHS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr07 | 28788590 | 28789000 | - | OsNip_07t0679700-01 | OsNip_07t0679700-01,OsNip_07t0679700-02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.881924 | 1.489775 | 9.025509 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48200 | RBH | 1.257144 | 0.889999 | 2.304979 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0679700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0027810 | RBH | 0.552903 | 27.297970 | 12.123160 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0027840 | RBH | 1.781258 | 12.957744 | 4.376806 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027630 | RBH | 1.936473 | 21.482946 | 21.703423 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027420 | RBH | 0.163153 | 0.818968 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0027720 | RBH | 6.396821 | 28.079237 | 41.839577 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0469000 | RBH | 7.1351805 | 17.0007695 | 14.7517745 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028180 | RBH | 0.151647 | 1.672573 | 3.151888 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0483100 | RBH | 16.5170335 | 15.2309065 | 24.4065085 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027450 | RBH | 0.354262 | 0.323702 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0027910 | RBH | 0.635337 | 13.842337 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027630 | RBH | 5.183708 | 35.023308 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0027960 | RBH | 0.299757 | 2.670221 | 3.991055 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027520 | RBH | 0.341085 | 8.783845 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027580 | RBH | 0.205753 | 3.224909 | 4.299411 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027330 | RBH | 0.965586 | 19.712921 | 25.619867 |
