Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0677600 | OGI:07078380 | 10/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:28690629-28692640 | ||||||||
| Gene Symbol | prx115 | ||||||||||
| DNA seq | GATATTAAATTTTTGGTTGAAATGGAACATAATTTTCAAAACAATTCAAATACAAGAGCAGGCCATCACAAAATCAGAAGTACATGCAAGCACACCCTTCAAGAAATCAGCAGCTACCACAGGTGCCATGCAAATTCGTGGCGATGACTCGTGTCGTGTGTCGCTTGACCACACCAGGATCGATCGATCACTCACTGGTTAACAACCCGGCAGTTCTCCCTGATCTCGCCGTCGTCGCCGGTGAGCGGGCTGATGTTGCCCATCTTCACCATGGCGGCGCCGAAGTCCTCCCAGAACTTGTCCGGGTTCTCGCCGTAGTACTTGACCAGCTCGTCGCTGTCGCCGCCGCCGCCGCCCTGGTACAGCTGCTGGTCCGTGTGCAGCAGCGCGCGGCCCTGCGTGAGGCCCTGGTAGTAGTCGGTGTCCACGGTGGTCGGCGTGTCGTCCAGCGAGGCGAGCGCCTCGTCGTCGCCGACGATGGGGCACTGCTCCTCGAGCGCCGCGGCGTAGGCCGGGTCCAGCGTGTCGGTCTCGTTGTAGAGGCGGCTGCGGAAGAAGAGGCAGCGGGAGTAGCCCAGCGTGTGGCCGCCGGAGAGCACGACGAGGTCCTGCAGCGACAAGCCGTGGGACTCGAAGTTGTCGACGAGGTCCGGGAGGTCCATGAACGGGTTCGGGATGTCGTCGTTCGCGTCGTCGATGCTCGCCGTCGTCGCGTCGCGCCGCCCCAGGAGCACCTCGTACGAGCTTCCCCCGAGCTGCAAACAAAATGAATCGTACGTGTCACGTTGCATTGACATCAGGGTCTGTTTAGTTCCCTAAACTCCCAAACAAAATTTTTCGTGCTGTCACATTAAATGTTTGACATATGTATGTAGTATTAAATGTAAAAAAAATCAGTTACATAGTTCGCCAGAAAATTATGAGACGAATCTTTTAAGTCTAATCGCGTCATGATTTGACAATGTTGTGCTACAATAAATATTTGCTGATGACGGATTAATTAGGATTAATAAATTCGTCTCGCAGTTTCCTGACATAATCTACAATACGTAAAAGTGGTTGTGCCTTATATTTTACGATGGATGGAGTATTAGACTACGTTTAATACTTCAAATATATATCTATATATCCGATGTGACATGCAGGGGCAAATTTTTTTGCCAACTAAATAAACCCTCATTTTGGCCTCACCAAGTCAACAGGATCAGGATGTGCCGCAGTTTTTCAGATAAGTGAATCACGACTCATTCTCTTGTGAAAATGATGTCATGAAAGCCGGTTATTGGGTTTAGGTTGAAGAAAGATTTTCAAAAGGAGCATGGTTTGTCTTATGGTCGATGACGTTGCCCTGTTCGATAGATAGCTTTCTACTACTAGTAGTACCTTTCAATCGACAGTATGTGTAACGTGGATAAGTTTTACACTTGTACTGAACTTACCGCGACGATTGAATCACGAGCAGCAACTGCCAAGATATCAGCGCAGGAGACAACATTCCCCAAGCAGGCCGTGTTCACCGCCACCTTGATGGCGTCGATCACGTCGAACCCTCTCAATGACATGTTGTTCGGCTTCGCCAGCTTCTCCCCGATCATGTCGTCGGTGTCGTCCAGCAGAACGGAGCCATCACAACCCTGCATCACGTTCGTTCATCACCAAAACATCTCATCTGCTTGTAAAATCTGCAGCAATTAACCACTAAGTTGAAGCGTGCATGATTTAGTAGCTAGCTCACATTGACGAAGCAGTCATGGAAGTGCATCCGGACCAAGGACGCGCCCATCCTCGGCTCCTTCAAGATGGCGGCGCCGACGACGAGCTTGATGGTCGTCAGCGCCTGCGGGCACGTCTCGCTGTAGAAGTCCGGGGTGAGCTCGCCGGAGCCGGAGGCCGACGCAAAAGCCGCGGCCATGACGGCGAACACAACAAGAAATGGCGCCATTTTTGGCAAGCTGCTACTACTGCTTCCAGTACCAGCGATTAGCTAGTGAGATGGTCGAATGTGCTGGTTT
More
|
||||||||||
| CDS seq | ATGGCGCCATTTCTTGTTGTGTTCGCCGTCATGGCCGCGGCTTTTGCGTCGGCCTCCGGCTCCGGCGAGCTCACCCCGGACTTCTACAGCGAGACGTGCCCGCAGGCGCTGACGACCATCAAGCTCGTCGTCGGCGCCGCCATCTTGAAGGAGCCGAGGATGGGCGCGTCCTTGGTCCGGATGCACTTCCATGACTGCTTCGTCAATGGTTGTGATGGCTCCGTTCTGCTGGACGACACCGACGACATGATCGGGGAGAAGCTGGCGAAGCCGAACAACATGTCATTGAGAGGGTTCGACGTGATCGACGCCATCAAGGTGGCGGTGAACACGGCCTGCTTGGGGAATGTTGTCTCCTGCGCTGATATCTTGGCAGTTGCTGCTCGTGATTCAATCGTCGCGCTCGGGGGAAGCTCGTACGAGGTGCTCCTGGGGCGGCGCGACGCGACGACGGCGAGCATCGACGACGCGAACGACGACATCCCGAACCCGTTCATGGACCTCCCGGACCTCGTCGACAACTTCGAGTCCCACGGCTTGTCGCTGCAGGACCTCGTCGTGCTCTCCGGCGGCCACACGCTGGGCTACTCCCGCTGCCTCTTCTTCCGCAGCCGCCTCTACAACGAGACCGACACGCTGGACCCGGCCTACGCCGCGGCGCTCGAGGAGCAGTGCCCCATCGTCGGCGACGACGAGGCGCTCGCCTCGCTGGACGACACGCCGACCACCGTGGACACCGACTACTACCAGGGCCTCACGCAGGGCCGCGCGCTGCTGCACACGGACCAGCAGCTGTACCAGGGCGGCGGCGGCGGCGACAGCGACGAGCTGGTCAAGTACTACGGCGAGAACCCGGACAAGTTCTGGGAGGACTTCGGCGCCGCCATGGTGAAGATGGGCAACATCAGCCCGCTCACCGGCGACGACGGCGAGATCAGGGAGAACTGCCGGGTTGTTAACCAGTGA
More
|
||||||||||
| Protein seq | MAPFLVVFAVMAAAFASASGSGELTPDFYSETCPQALTTIKLVVGAAILKEPRMGASLVRMHFHDCFVNGCDGSVLLDDTDDMIGEKLAKPNNMSLRGFDVIDAIKVAVNTACLGNVVSCADILAVAARDSIVALGGSSYEVLLGRRDATTASIDDANDDIPNPFMDLPDLVDNFESHGLSLQDLVVLSGGHTLGYSRCLFFRSRLYNETDTLDPAYAAALEEQCPIVGDDEALASLDDTPTTVDTDYYQGLTQGRALLHTDQQLYQGGGGGDSDELVKYYGENPDKFWEDFGAAMVKMGNISPLTGDDGEIRENCRVVNQ |
||||||||||
| Function | Cationic peroxidase 1 [UniProtKB/Swiss-Prot:P22195] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0677600 | OsNip_07t0677600-01 | Chr07 | 28690629 | 28692640 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGCCATTTCTTGTTGTGTTCGCCGTCATGGCCGCGGCTTTTGCGTCGGCCTCCGGCTCCGGCGAGCTCACCCCGGACTTCTACAGCGAGACGTGCCCGCAGGCGCTGACGACCATCAAGCTCGTCGTCGGCGCCGCCATCTTGAAGGAGCCGAGGATGGGCGCGTCCTTGGTCCGGATGCACTTCCATGACTGCTTCGTCAATGGTTGTGATGGCTCCGTTCTGCTGGACGACACCGACGACATGATCGGGGAGAAGCTGGCGAAGCCGAACAACATGTCATTGAGAGGGTTCGACGTGATCGACGCCATCAAGGTGGCGGTGAACACGGCCTGCTTGGGGAATGTTGTCTCCTGCGCTGATATCTTGGCAGTTGCTGCTCGTGATTCAATCGTCGCGCTCGGGGGAAGCTCGTACGAGGTGCTCCTGGGGCGGCGCGACGCGACGACGGCGAGCATCGACGACGCGAACGACGACATCCCGAACCCGTTCATGGACCTCCCGGACCTCGTCGACAACTTCGAGTCCCACGGCTTGTCGCTGCAGGACCTCGTCGTGCTCTCCGGCGGCCACACGCTGGGCTACTCCCGCTGCCTCTTCTTCCGCAGCCGCCTCTACAACGAGACCGACACGCTGGACCCGGCCTACGCCGCGGCGCTCGAGGAGCAGTGCCCCATCGTCGGCGACGACGAGGCGCTCGCCTCGCTGGACGACACGCCGACCACCGTGGACACCGACTACTACCAGGGCCTCACGCAGGGCCGCGCGCTGCTGCACACGGACCAGCAGCTGTACCAGGGCGGCGGCGGCGGCGACAGCGACGAGCTGGTCAAGTACTACGGCGAGAACCCGGACAAGTTCTGGGAGGACTTCGGCGCCGCCATGGTGAAGATGGGCAACATCAGCCCGCTCACCGGCGACGACGGCGAGATCAGGGAGAACTGCCGGGTTGTTAACCAGTGA
More
|
|||||||
| Protein seq | MAPFLVVFAVMAAAFASASGSGELTPDFYSETCPQALTTIKLVVGAAILKEPRMGASLVRMHFHDCFVNGCDGSVLLDDTDDMIGEKLAKPNNMSLRGFDVIDAIKVAVNTACLGNVVSCADILAVAARDSIVALGGSSYEVLLGRRDATTASIDDANDDIPNPFMDLPDLVDNFESHGLSLQDLVVLSGGHTLGYSRCLFFRSRLYNETDTLDPAYAAALEEQCPIVGDDEALASLDDTPTTVDTDYYQGLTQGRALLHTDQQLYQGGGGGDSDELVKYYGENPDKFWEDFGAAMVKMGNISPLTGDDGEIRENCRVVNQ
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0339300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48060 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0677600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0027640 | SBH | 2.869101 | 405.604462 | 1.475809 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0027640 | RBH | 0.0 | 0.0 | 1.203154 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027450 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027240 | SBH | 1.349782 | 12.706379 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0027530 | SBH | 0.000000 | 65.464058 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0467200 | RBH | 2.678867 | 8.310159 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028030 | SBH | 0.467455 | 21.708141 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0481100 | RBH | 3.9469675 | 14.2573385 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027340 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0027790 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027510 | RBH | 0.0 | 5.830977 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0027840 | RBH | 0.0 | 0.368406 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027400 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027430 | SBH | 0.902221 | 51.911198 | 1.349761 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027170 | SBH | 0.0 | 48.229000 | 0.0 |
