Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0592200 | OGI:07067320 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:24129716-24137321 | ||||||||
| Gene Symbol | OsAP65 | ||||||||||
| DNA seq | AGAAGCCGAATATCCTCAGCACTTATCAGATACTAGATAATACAACATTCCGTCCATGGCTGCTGTGCTTTTGTGCCTTGCTCTATTCTACTTAATCTACATTACACGAACAAAACCTTCTTCTACTGTAAGCTACAAGAGGAAGCTCTTGATCTGAATCGCTAGACAGTTTATGAACAGAGGCTCTAAGTGCTGAATCGAGAAGTTATGTAATCTTGTGCTTCTTCTGTAAGCTTGTAGCTTGTGTTACATACAAAGAAAAAGGGCAACTCCCAGCAGCGGATGTGAACCCGCTGCAACATGGCAGCCCGCACAACGGTATTTCTACCAAAGAATCGCCTATATGTTTACTCCGTTGAACCACTCCAAATTATAGCGGTTGGAGCTCTTGCTCAGGAACTGCTGAATCCACAGGTCTATATGCCGCTTGACCTCTAAATTTCTTTCTCCAGACAATCAGTACTAAAAGGGCCGATAAAGTCAGCAAAACAACTAGCAAAATTCCAAGCAGTATAGAGACTACATGATCTCGGAACCATGACCTGTAGAAATAATTACCGAATGTAAGTTCTCCAGCAGATGAAAATGCCAAGATTGATGCATCGATGCCGCACAAGAAATATTCAAGGGAATTGGTGAAAATGATTTTTCCTAATAGATGTGAGAATCTTGCTTAAGCACTTTGACAGATATTCAGGTTTTCCATGTTTGCCAGGCAGCCCCATTGCATACTACAACTACACGCTAAAGCCACTGATCAGTATAAGAATAGTGTTTGGGAGAGAGAACTTTATAGTTTATAATGGTATATCTCTAAACAGGCTAGTGTAGAGTGACATGTATCTACTTTTTCCCTGCAAAAAGGATGTCGAAGGGATGTTGCCTTGTCATTTTAGATCAGGATGAAAGCAGGGCTTCAATGAAAAGAAAGAGTTGAATTCCAATGATAAAGACAGAGCTTATTATGATAATATGGACTGTACAAGCTTTTAATGGCAATATAATCTTGGCAGTTATAATGGTGTTTGCTTACCTCTTGGATAAAGGCTGCACATTCCATTCAAGTAACTGATAACTGCCAAGATTTTCAGGCAACTGGACGTGATGTTGGGTCAACCGATAAATGATACCCTAATCATACATCAATGCAGCAAATCAATTATCTTTATAACAGATAGATTAAAGTAGTCCTCATATGTGCAAGAGTGGATGCTACCATTGCTGTTGTATTAGTCATAGAATTAGAAGGTCCAGCTGGAAAAATCCCCCATCTGATTAGAGTAGAGTTTCCTTGGCTTGTAACATTCATAACTCGAACCTGTCAAACTCAAGAGGCAACTTTAACAAATCACTTCAAAAGAATGCTAGTGCTATCAAGATAGGATGGTGCAAAGCTGTAAACAATAGCAAGGATAGTGTCCCTCACGCATCACCTCCAAACAAAACTAGAAAAACCACAACAGCACAGACTATGGGTCACCCTTACCTGACGGGAGTCAATGTCCAGCTCTTTAGCTATAAGCTCAGCCAGCTCATGGAGGTGAGGTTTCAGGTTTGGATAAGTAACATTTATGGACATATCAACAGTGATTAGGCCAACATCAAATTCTGCAAGCAGGAGAAAAACCTTATTCATCAGCGCATAAAATAAAGCTAGAAATAGTGTGTATAGATGGCCAAAAGGCCCGCCCGGCACGGCCTGGCCCAGGCACAGCCAGGCACGGCCCACCAGCCATCGGGCCGGCACGGCCCGATCGGCACTTCGTGCCGGGCCGGCACGGCCCATGGGCTGCGCCTCCCGCCTAGGCACGGCCCACCAACCGTCGGGCTGTGCCGGACCGGCCCGAAGGCGCAGGTAGCCCATCGTGCCTTTTTTTAAATAAGTCTATTTTTCGTCCCTCCTCTTTGGGCTGTGACATAATATATCGAAAATAAGTCTATTTTCCGTCCCTCCACTTTGGGCTGTGACATATATATAGTGAAAATAAGTCTATTTTCCGTCCCTCCTCTTTGGGCTGACATATATATAGGTAAAATAAGTCTATTTTACATCCCTATTCTTTCGACCGTGGCATATAATATGTCTATTTTTACTCCCTATTGTTTATGTGTCGGGCTTGGCATGCGGCCCATTGTGCCGTGCCGGCCCAACGTGCCAGCGGAGAGGCCCAGGCACGGCCCGGTGGTCGGGCCGGGCCGGCACGGGCCCGACCCTTGACGGGCCGTGCCGTGCTTGGGCCGGGCCTAAACGCCGTGCCATGGGCCGGGCCGTCGGGCCTCGGGCCTTTTGGCCATCTATAATAGTGTGCACTAAATAAAAATAATGATTTAAGTTATTAGGCAAGAGCTACCAAAACAAAATAACTAGGTGATTTCTAGGTAATTTAATTAAGTAGGTAAACAAAATTATTTGAGAAAAAAATTAGGTAAACAAAAATGAAATGGTGCAGATAAAAAATGGGGAAAGATTGGGCTGTCTGCACCCATTTCAAAGAAAAATTTGATCCCAATGAAACTTCTGGATAACATCCAAAGAAAGTACCCCAAAGAAGATGATAATAGTTGACCATTCGAAATTATAAAAATAGCAAATGCTTGTGATTCAACGTTCATAAAACATGACCACCAAAATGAAGAAAGATAGAGAGTAAATTTCAGAAAAGTGCAATAATTTGGTCAATACTATAACTTTTCTACAACTTAAGCATAGTGTTTCACAAAACTGCAACAATAGCAAACAATTTTATTAGAAAACTGCAACTTTATCCCCCTATGTGCATATGACATGTGGGCCCAACTTGCCAGTCAAAGTTGCAGCTTTCTGATAAAATTCTACCTTATTGCCACAGTTCTCTAAAATGACAAGCTAAAGTTGCAGCAAATCAATAGTTTTAACAAAATAGTTGTATAGGTAGGGCTGTACCAGGCAAACCACTAGGAGCAGGAGCTGGTGCCATATCTCCCTCTGAATCTGAAGGTGCTGATGAAGGAACTTCACTAATATGGAGCCTCTCCCACAACTCTGAACAGTTAGTTTTCCAAAAGCCAATCTTCTCATTGTGACGGTCATAGGTTACAAGAGTATTACGGACAACAATTCCTGCCAGTAAGATCATTATTCTTTAGACACTCAAAGCGGGCAAGGTTTCAAAGTACATAGAGCCATGCAAACTATTAGAACATTCATGTAGACTGTCTATAAATCAAATAAAAGGTCAAAATTAATATAAGAAAAGTATAAATCTCTCTAAAGATTGATCTGCTTGACTCTTTAAGGGATAGAGAAGAGAACAAAAACACCATACTTTCCTTTTAGAGACAAAAGAGTGCATAAATACAACAAGCAGCCAAGGTCTATTATACTGTTGGCAGAAAAAAAATTTCTTGGTACAATACCGTATGTTGGCTTGCAACCGGCAATTAATAAAGAGAATGCCTCCTTTGTAGGCTCAACCACTTTTAGAGTTTTAACTGATAATTCCATGAACACTTTGCTTCTAACCTCAAATTTTCTGAAATCAGGAATAACTCTTAAGGATGCTTGTTTTTGGATTGTTCACAGATAATTGCATGTTTGTTATCTATGAAAAAAATAGAGGGTTTATGCATTCTTATATTCATAAAATGATAAACAATGTTGGTATTTCACAGCCATGGTTTTCGGATTACACACCAATCATTGCATACTTGCACACGTAAACTATTGGATTACGAAATTGAATAAGTGCAGCCAAGAAATTGCCATAGTGATGAAGGAACAAGCTACACTGACACAAAAGTTACCTCAGATTATATCTAAAAAATATTGAAAAGTGCATCAGCTGGTTATGCTGAAAAAGATAAGGAGACCATTGTTATATAGTAGTATTTTCTACAAAGAGAGTTACTTGGTTTTCTACTCAAGTTTCCAGCAGACGCGAGTGTATAAGCTGGTCAAAGACTCATAGTACAGGTGCAAATGTTATTCAGCATACACTAGTAACAAGTTATATGCGAATAAAGTAGAGATAGTGTAGTCAGATGATATAAATAAAAGAAGTCCAATGGAAATTTTCTTGAAGTTCCTCGTAAGAGACCAAGAGTTGAAGATCTTACCCCCTAATAGTGTTGTCGGATCTTTTCCATTCTGAAACACACCCAAGCAATAAGCCCCTTCAACCTTCGAATGCTTTATTTTGAAACCGGAAAGAAGAGAAGACAAAACATGAACTCAACAACAGGCAAAGCAAAAAAGTAATGGGGTGTCATAATTCATCAGAACAGGTCTAAGCTTGGAATTTCTCATACCCGGAACAAATAGTTTTCAGGTGAAAGCGAAAGCTTCTGCCCATTTCCAAATACCATGTCAACATCTGGAAATACCTCTGATAATTGGGAGACGTTCCTGAAGGTAAAGTGATAAGATAAGAACATTGATGATGAAAACAAAGGGGGTAGAAATTGTTATCATGGTGCAAGAGTTACCTTCCAGCACCTGCAAAGCAGATGTCTTTATAATTTGGATCTGGGCCACGGATTTTCTTCAGAGAATTTACTTTATTTGTCACCTATCCATTAAAAACATAATTATTCCAGCATACTTTTCCAGGAGTGTCCATTTTAAAGATTTCCATTTTCAGGAATGACAATGAAGAGCTGAATAAAAACAAAATGAAAAGAATCTGCAATGCGACAACCAAGATAGCAGAAAAGGTGCCAAACAGATTGGCTCGTACACATGCAAAACCAGGTGTTGCCAAAGTAGGAGTAAATTTTTCTGTCTTAACATCTGAAACTAGACAGGTTAATTGCAAAATTGGCATCTAGGGAAATATATTAAATATAAAATAGTAAAGTAGCATAGTTAGCAGATGGTAAAAGCAATTCAAAAAAGGTAAAAGTGGAGGAGATATCATTTGATAACTTACAGCATCTTTAAATGCAACAAATGCTTGTTCAGGCAGGTAAGCATATGTGGTTCCACTATCTAAGACAGTGCCATGTTTGCTGTTGAATATCTTTGGGTCTAACCGCAATGCCTTTCCGGCAACATGTATTTCCTTTAACTCAATGTTGTAATACGGGCTGTTGACAATCCAAAATTAATAAGGAAATGTATTAAATATACAGAACATTAGAAAACCTTCCTCCAGCAGGCTACTAAAAGAATCTTCAGTCTGGTGTGGAAAAAACAAAAATGTATAATACCTGCGGACAGGGTTTGAATGAGAGAAAACCATGTCAGGAGGAGCAGGCATCCCACCAAGTACCATAGTACCACCACCAACATCCATTCCACCATAGCACAGAGAGAATGAATCACTAATGACACCCTTCTCAACAAGCTGATCCATTATGCTAAGTTGACCACGGCCCAGCCCCATAATACCATCAGCATGTTGACTGAACAAATCTCCTGTTTCGGTGTTTTCACAGCCAAAAACAGCACGCTGTGGCTTAAGTTCACTTTCTTTGCCAAATGACATAATGTCCTCGCCAAGCACACCACTGCTGGAGCTCATTTCAGCATACTGCCTCTCATAAGTGCATTGACTCCTCTCATTATCACAAGTACAATCAACATTGCATTTTACTGGTGAATATGTACTGGAGAGATCAGGTTGGAATCGTGGATCCTACAACATGCCAAACTTTAGTGTATACTAGAGAAAGTTGATTTCTAGATAGTTAAAAAGGAAACTTCAAGTGGGAAAAAGGTGATTTTCTCAATGGGTATGATCAAATACACATCTTAACTTTTTTTATCACGTAAGATATACATCGCATTGGAGAAATCATGCCAAAATATTGTCACACTGTTTGTACACACATTAATATAAATTAAATAGTATAAATGCTTAAACTTTTACATGTGCCTCAATGATGTTAGGTGATTCACTCTGCAAACATGACATAGAATAAGAGGATGGTACAACAATGGTGCCATCTAGAATCTAGAAAAATCACAAGTTATGATAAGAATGATACAATTGTGTCAAAAAGATGCAACTATGCAAGTGACAAGAACAGTTCTTTTTAGAATCAGGTTATGGGCTTCCCATTAGTTGTGGACTCCTCTATTACTTATCAGCAATAGTAGCAATCTACAACTGATGGAAGATTTCCAAACTACTCAGATTATACAGGACTACAAGAGAACAGTGGCCTGACTAACCATGCAAACAGTTGCCCAAGAAAAGGCTGGGTATGTAGCAGAAAGAAGTGAAAAATACAGTAACATATTTGCCTTTTCATATGGATATGTTTTCTATGTGACGTTTGAATCTAAAGCCCAAAATTCAGAGAACGATAAGGGAGCAACAAACATCAAATTGCATAGCAATACCAGATGTGTATTCTGGACATGGCAGTGGGTTTACTTGGTAGGAAAATTGGTGTTAATACAAATTGTTTCCACTGCTTTGCCATAAACAATCCAATACACTTCCCAAATCTATTGCCTGATAATTGTCAGCACTCAGGAAAGACATGGGACTCATTTGGCATGGAGAAAAAACAAAGAAGAATCGACTAACTGTTGACAACCAGGAACGCCAATGGTTTGAAAACAAAATGGTGCAAAATTTGGCTAAAATGATGGCTATCAAACAAATAGTAATTCTTGTTGGTTGTGACCAAGATTGGCATGGGCTTTGTTGGATGTTGACCTCTATTAAATTCTGAGGCATTCACAATTGAGAAAAAAAGAAGCTACATCATCGTCGCTCGGTTAGTTTTAATATACCCTGCAGGTTGTGGAGGTGCTCTTTGCGTACCATACACTTTATCCACATCGTATAGCTGGAACTTCCGAACCTATCCAAATGGAAACGTGTATTTTCCAAGACTTTGAATTTTGGAACAATAAATGTCTATGCACACACCCAAGCCCGACAAAAATGTATCATTTGCACTGGAGTCAATTGTCCAACCTGAATGGTCAAGCGACAGTTTGACATATGGGAATCCAATATCCATACACGCGACCATCACCAATCCTAATTAAACCGATCGTCACACACAATTCAAACAGGTAAGCAGAGAATTTGACGAATCCAGGCCGACCTGGTGGTTGCCGCACTGCTCGCAGGTGGCGCAGGGAACGTAGGTGACGGTGCTCCCGGAGTCCACGATCAGCGCGAACTCCTGCGAAGGCGTCCCGATGTACAGCCTCGTCGTGTAATACCTAAACCAGCACGAACAACACGCGGCGACATCCAGCCTCAGATCCAACCACGCAACCCCCCCAAGAAAAAAAAATTTGGGGGAAATTATCGAGAGAGAGAGAGCGGAGGGCAAAAAACGAACTGTACCGACCCGTTGGTGAGGAGATCATCGTGGAGGCGCATGCGGGCGTTGGGGTTGTGTCCATCGCCGAGGCCGCGCCTGGCCGAGGAGGCGGGGAGGCGGGTGGCGTTGGGGTAGGCGAGCGTGAGCGGGAGCACCAGCGGCGGCCGCGCGGGGCCGGCCCGATCGGGGGATCCCGCGGCGGCGGCGGCGGCGGAAGCGATGAGGAGGAGGAGGACCACCGCGGCGGCGAAGGGCACGAGCGAGCCGAGCCGACGCGACCGGCGACTCGCCATGGCGAGGACTCGTCGCGCCGAGCCGAGGAGGAGGAAGGAAGGGG
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| CDS seq | ATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACCCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAACGGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGATCCACGATTCCAACCTGATCTCTCCAGTACATATTCACCAGTAAAATGCAATGTTGATTGTACTTGTGATAATGAGAGGAGTCAATGCACTTATGAGAGGCAGTATGCTGAAATGAGCTCCAGCAGTGGTGTGCTTGGCGAGGACATTATGTCATTTGGCAAAGAAAGTGAACTTAAGCCACAGCGTGCTGTTTTTGGCTGTGAAAACACCGAAACAGGAGATTTGTTCAGTCAACATGCTGATGGTATTATGGGGCTGGGCCGTGGTCAACTTAGCATAATGGATCAGCTTGTTGAGAAGGGTGTCATTAGTGATTCATTCTCTCTGTGCTATGGTGGAATGGATGTTGGTGGTGGTACTATGGTACTTGGTGGGATGCCTGCTCCTCCTGACATGGTTTTCTCTCATTCAAACCCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCATTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAA
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| Protein seq | MASRRSRRLGSLVPFAAAVVLLLLIASAAAAAAGSPDRAGPARPPLVLPLTLAYPNATRLPASSARRGLGDGHNPNARMRLHDDLLTNGYYTTRLYIGTPSQEFALIVDSGSTVTYVPCATCEQCGNHQDPRFQPDLSSTYSPVKCNVDCTCDNERSQCTYERQYAEMSSSSGVLGEDIMSFGKESELKPQRAVFGCENTETGDLFSQHADGIMGLGRGQLSIMDQLVEKGVISDSFSLCYGGMDVGGGTMVLGGMPAPPDMVFSHSNPVRSPYYNIELKEIHVAGKALRLDPKIFNSKHGTVLDSGTTYAYLPEQAFVAFKDAVTNKVNSLKKIRGPDPNYKDICFAGAGRNVSQLSEVFPDVDMVFGNGQKLSLSPENYLFRHSKVEGAYCLGVFQNGKDPTTLLGGIVVRNTLVTYDRHNEKIGFWKTNCSELWERLHISEVPSSAPSDSEGDMAPAPAPSGLPEFDVGLITVDMSINVTYPNLKPHLHELAELIAKELDIDSRQVRVMNVTSQGNSTLIRWGIFPAGPSNSMTNTTAMGIIYRLTQHHVQLPENLGSYQLLEWNVQPLSKRSWFRDHVVSILLGILLVVLLTLSALLVLIVWRKKFRGQAAYRPVDSAVPEQELQPL |
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| Function | Aspartic proteinase-like protein 2 [UniProtKB/Swiss-Prot:Q9S9K4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0592200 | OsNip_07t0592200-02 | Chr07 | 24129716 | 24137321 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGAGTCGCCGGTCGCGTCGGCTCGGCTCGCTCGTGCCCTTCGCCGCCGCGGTGGTCCTCCTCCTCCTCATCGCTTCCGCCGCCGCCGCCGCCGCGGGATCCCCCGATCGGGCCGGCCCCGCGCGGCCGCCGCTGGTGCTCCCGCTCACGCTCGCCTACCCCAACGCCACCCGCCTCCCCGCCTCCTCGGCCAGGCGCGGCCTCGGCGATGGACACAACCCCAACGCCCGCATGCGCCTCCACGATGATCTCCTCACCAACGGGTATTACACGACGAGGCTGTACATCGGGACGCCTTCGCAGGAGTTCGCGCTGATCGTGGACTCCGGGAGCACCGTCACCTACGTTCCCTGCGCCACCTGCGAGCAGTGCGGCAACCACCAGGATCCACGATTCCAACCTGATCTCTCCAGTACATATTCACCAGTAAAATGCAATGTTGATTGTACTTGTGATAATGAGAGGAGTCAATGCACTTATGAGAGGCAGTATGCTGAAATGAGCTCCAGCAGTGGTGTGCTTGGCGAGGACATTATGTCATTTGGCAAAGAAAGTGAACTTAAGCCACAGCGTGCTGTTTTTGGCTGTGAAAACACCGAAACAGGAGATTTGTTCAGTCAACATGCTGATGGTATTATGGGGCTGGGCCGTGGTCAACTTAGCATAATGGATCAGCTTGTTGAGAAGGGTGTCATTAGTGATTCATTCTCTCTGTGCTATGGTGGAATGGATGTTGGTGGTGGTACTATGGTACTTGGTGGGATGCCTGCTCCTCCTGACATGGTTTTCTCTCATTCAAACCCTGTCCGCAGCCCGTATTACAACATTGAGTTAAAGGAAATACATGTTGCCGGAAAGGCATTGCGGTTAGACCCAAAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAA
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| Protein seq | MASRRSRRLGSLVPFAAAVVLLLLIASAAAAAAGSPDRAGPARPPLVLPLTLAYPNATRLPASSARRGLGDGHNPNARMRLHDDLLTNGYYTTRLYIGTPSQEFALIVDSGSTVTYVPCATCEQCGNHQDPRFQPDLSSTYSPVKCNVDCTCDNERSQCTYERQYAEMSSSSGVLGEDIMSFGKESELKPQRAVFGCENTETGDLFSQHADGIMGLGRGQLSIMDQLVEKGVISDSFSLCYGGMDVGGGTMVLGGMPAPPDMVFSHSNPVRSPYYNIELKEIHVAGKALRLDPKIFNSKHGTVLDSGTTYAYLPEQAFVAFKDAVTNKVNSLKKIRGPDPNYKDICFAGAGRNVSQLSEVFPDVDMVFGNGQKLSLSPENYLFRHSKVEGAYCLGVFQNGKDPTTLLGGIVVRNTLVTYDRHNEKIGFWKTNCSELWERLHISEVPSSAPSDSEGDMAPAPAPSGLPEFDVGLITVDMSINVTYPNLKPHLHELAELIAKELDIDSRQVRVMNVTSQGNSTLIRWGIFPAGPSNSMTNTTAMGIIYRLTQHHVQLPENLGSYQLLEWNVQPLSKRSWFRDHVVSILLGILLVVLLTLSALLVLIVWRKKFRGQAAYRPVDSAVPEQELQPL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0592200 | OsNip_07t0592200-03 | Chr07 | 24129717 | 24134715 | - | RAP2018-11-26 | ||
| CDS seq | AAGATATTCAACAGCAAACATGGCACTGTCTTAGATAGTGGAACCACATATGCTTACCTGCCTGAACAAGCATTTGTTGCATTTAAAGATGCTGTGACAAATAAAGTAAATTCTCTGAAGAAAATCCGTGGCCCAGATCCAAATTATAAAGACATCTGCTTTGCAGGTGCTGGAAGGAACGTCTCCCAATTATCAGAGGTATTTCCAGATGTTGACATGGTATTTGGAAATGGGCAGAAGCTTTCGCTTTCACCTGAAAACTATTTGTTCCGGCATTCGAAGGTTGAAGGGGCTTATTGCTTGGGTGTGTTTCAGAATGGAAAAGATCCGACAACACTATTAGGGGGAATTGTTGTCCGTAATACTCTTGTAACCTATGACCGTCACAATGAGAAGATTGGCTTTTGGAAAACTAACTGTTCAGAGTTGTGGGAGAGGCTCCATATTAGTGAAGTTCCTTCATCAGCACCTTCAGATTCAGAGGGAGATATGGCACCAGCTCCTGCTCCTAGTGGTTTGCCTGAATTTGATGTTGGCCTAATCACTGTTGATATGTCCATAAATGTTACTTATCCAAACCTGAAACCTCACCTCCATGAGCTGGCTGAGCTTATAGCTAAAGAGCTGGACATTGACTCCCGTCAGGTTCGAGTTATGAATGTTACAAGCCAAGGAAACTCTACTCTAATCAGATGGGGGATTTTTCCAGCTGGACCTTCTAATTCTATGACTAATACAACAGCAATGGGTATCATTTATCGGTTGACCCAACATCACGTCCAGTTGCCTGAAAATCTTGGCAGTTATCAGTTACTTGAATGGAATGTGCAGCCTTTATCCAAGAGGTCATGGTTCCGAGATCATGTAGTCTCTATACTGCTTGGAATTTTGCTAGTTGTTTTGCTGACTTTATCGGCCCTTTTAGTACTGATTGTCTGGAGAAAGAAATTTAGAGGTCAAGCGGCATATAGACCTGTGGATTCAGCAGTTCCTGAGCAAGAGCTCCAACCGCTATAA
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| Protein seq | KIFNSKHGTVLDSGTTYAYLPEQAFVAFKDAVTNKVNSLKKIRGPDPNYKDICFAGAGRNVSQLSEVFPDVDMVFGNGQKLSLSPENYLFRHSKVEGAYCLGVFQNGKDPTTLLGGIVVRNTLVTYDRHNEKIGFWKTNCSELWERLHISEVPSSAPSDSEGDMAPAPAPSGLPEFDVGLITVDMSINVTYPNLKPHLHELAELIAKELDIDSRQVRVMNVTSQGNSTLIRWGIFPAGPSNSMTNTTAMGIIYRLTQHHVQLPENLGSYQLLEWNVQPLSKRSWFRDHVVSILLGILLVVLLTLSALLVLIVWRKKFRGQAAYRPVDSAVPEQELQPL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.979341 | 4.068587 | 8.205966 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g40260 | RBH | 2.082072 | 2.028298 | 1.181314 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0592200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0021750 | RBH | 0.941294 | 35.591457 | 10.994616 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0021780 | RBH | 0.364641 | 3.044229 | 3.924079 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0021670 | RBH | 4.927240 | 19.143105 | 13.235367 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0021550 | RBH | 0.340644 | 0.499480 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0021630 | RBH | 7.843323 | 38.419525 | 21.341681 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0395700 | RBH | 7.330792 | 30.6257915 | 17.8548645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0022070 | RBH | 0.290422 | 1.858746 | 1.986608 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0408600 | RBH | 4.99554 | 16.137861 | 12.4236135 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0021370 | RBH | 0.375391 | 0.421251 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0021520 | RBH | 0.856820 | 18.427402 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0021420 | RBH | 7.428251 | 49.513481 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0021660 | RBH | 1.366776 | 3.401944 | 2.763049 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0021400 | RBH | 0.824790 | 25.796654 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G021290 | RBH | 1.811266 | 5.121201 | 3.429488 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0021360 | RBH | 2.560266 | 53.642525 | 14.937389 |
