Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0541800 | OGI:07058990 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:21407942-21411687 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGGCTCGTGTGGCCAAGCTCTTGACCACTTATCACAAAATGACAATATATACAGTTTCAAGTTCCAACTCGAAACAAAAACAAGCAACAAGCCAACTACACTAGCGATGGCAAGCTCTGCTTTAGGCCCTGCTACCTGGGAGACAATTGTGTCACGGTTTGAGAATAACCAGAGCTTCCATCGGAGAAAGATGCTACTGGAATATGAACTACAGGGGCCGGCAGAGTGCTAGTAGCATCGCTATTAAGTAAAACCATGACATCGGCCATTGTTGGACGATCTATAGGGTTCTGCTGGACACACAGGAGACCAATGTTAACACATTTTAGCACCTCGCCTTCAGGGTAGTTTCTTCCCAAGGAGTGATCTATGATCTCCTTAATGTTTCCCTCTGCCCAGTGCCTCCATACCTAGTATTAGATACATAAATATCTTCAGTAATCAGTATGCATGGTTATATGTTAGAAAGTACTAAAAGTGCAAGTGGCAATCAATGGTGCATTAGTCTTGGTGAATTAGCAAAATATATACTCCCTCTTTTATTAATAAATAATATTGTTAACTTTTGACATAATGTTTGATTATTCGTCATATTTAAAAATTATATAAATATCATTTGTTCTGTTGTGACATGTTTTATCATTAAAAAAGCTTTACGTAAGACTTATACTTCAGCACATTTACACTAAGTTACGTCATCTATTTAGAAAATGGAGGTAGTATATACTTACTATGCTTATTATATCTTCGTTTGGCTCAAAGAAATAGGGCCCGTTGTTCCTTCTCCGGCCCGTCACGATCTCTATGACGAGAATGCCGAAGCTGAACACATCTGATTTCGTGGAGTACTGCCCATGCGTCACGTACTCAGGAGACATGTACCCACTGCATCAACATCCAACAAGAATAATCACATGGTTAGAATGAGAATTGCATAGTTAATTATTTTATTACATATATATTTATGAACTAATTACAATGTCCCAACGATGCGGTTTGTAATCTCTCGAGTCTGGTCTTGTCCGAAGAGCCTAGCAAGTCCAAAGTCCCCAATCTTTGGGTTCATGTCTGCGTCTAGCAAGATGTTGCTCGCCTTCATGTCTCGGTGTACGATCTTTTTCTGGGAGTCCTGATGGAGATATTGAAGGCCCCGAGCAATGCCTTCAATGATCCTAAATCGTGTAGTCCAATCTAGCTGTCTCCTTTTCTCTTCATCTAATTAGCATGAATCATGTTCATTGCAGAAACATGAAAAGATGGTAACATATCTAAATTCAGGGGTGATATCAGTAGTACCAAAAAGAAAGGTGTCGAGACTTTTGTTGGGCATGTACTCGTAGACGAGCATCCTCTCTCCCTCTTCTAGGCAAAACCCCACAAGCTGCACAAGATTCTTGTGATGAAGTTTGGCCACCAAAACTAGCTCGTTTTTCACCTCTTCCAACCCTTGGTTTGAACCCTTCGCTAGCCTCTTCACTGCTACGTCTTGTCTGAAAAGAAGCCCCTGAAAAATTTGGTTTAATACCTTCTTACATGGAGATATGGATAGAAAAAACTGAATTTTGAATGGCTTAAAAGCTTGGTGCTGTAACTAATTTACAATATTAGGCGATCTTGAATGATATTTGCCAAATAGTATTAATTAATTAAATTATCAAAGTAACAATTAAGGATCAGTACACTCATAGTAAAAAGTTATCATTTCATATTTTTACCATGCTTAATTCGCCCCGTGAAATAAAAAATTATTTCCTCAAAAGAACACATAAAAGGTTACTTCCATACCTTATAAACAGCACCGAATCCCCCTTCGCCGAGTTTCATGCTTTCATTGAAATTATCCGTCGCTACTTGCAGTGATGCCAGAGATAGCAGGGTTGACTTGACACTTTCGAAGTCCTCAGCTGCATCAGCTGTCAAATTTTCATGAATTTGATAAACTGTTAATGAATACGGATGATTAACAATGTATAGTGGAATTTGATAAGAATTTTATGCCAATGATGAGAAGGATCACTCACGTCCGGTGAAATGCTCTGCTTTCCCTCGTCTTCTCTTCTTGCGTATATTCCACAAGAGGATGGAAACTGCAGCTACGATTGCAACTGCCACTATCGGCAAGACGATTTCCAGAATTTTGTTTGCTGAATTATTCTTGACTGCATTTTGGAGGGAAAATAATCAGTTCAAGTATTCAAAACAGAGCACCTGTTTTCTTGTCTGAGCAGCTGATTATTGAGCTACCAGCTGCTCAACGAACAAAATTGACTTTCTCTTCGCAGTGGCGGATCCTTCATGGGTCTATGGGGGTCTCGAGCCCTCCATTACCCGTGTCGTAACCATAGGAGCCCCCACGAAGACCCCACTAAAATTTTTTATCATACATTAATTAGAAGATGGGTTTATAATTTTTGTATAGTTTGTTCAGACCCTCATATTAATTCTTTCTGGATCCGTCTCTGTCTCTTCGTGTGCCAATTTATGATTTTTCTAAGACTCAATGAAAACAATGAGCTATGAAGATAGTCATCGTTAATTGACATACTACTAATATATATACGTGACATGATGTAATACAGCATTTGCCATGCTAAACTATGGGTCTTGACTGTCTGCGCGGTGATTATCTGACATAACACCAAGAATGTGACGAGTAACAAAAGTCAGACTTATCAGTTCAAAAGTAATCCGGTATAACATAAACAATGCAGAAATCCATGAACCATAAAAAAGTATAATGACTTATATTTTCTCATATTTGCAGTAAATTTGAACCCAGCAAATTTTCAAATATCATGTTTAAAAATTAACGATATCTTATATTTAAAAATGGAGGGAGTATATGTTATCGAAATGACGCGGTATTGTCACCTCCCGTAGTGCCCGGCGCAGCATCCGGCGACGCCGCCGCCGCCGCCGGCGAGAGGCCGTCGGCCCACAGCTTCAGCATCGGGGCTCCGGTGTAGAACTTGTCCTGGGATACCTCCGACCTCAAGCTGCACCTCGTGCCGACGATCCTCGCCCCCACCGTGGTCCGCGGGAACGTCTTCCACCACCTGGCGACGAGGTCCTCGAGGCAGCTCCGGCACAGCGCCGGCGACAGGTCCGGCGTGCACTGCGCCGCCGAGTAGATGTTCGGGAACCCCGGGTCGGCGCCCACCCGCTGCCCCGTGGCGAACAGCCTCGTGGTGTTCACTACCGCGTACATCAGGGTGGCGCTGAGGAGTTCCGTGACGGCGCGGTCGTAGCCGGCGACGTCGGCGGTGGTGACGTTGTCGCTGTTCATGAGCGGCGCCTGGCCGGAGTTGTTGGCGGAGGCGAGGAAGTCGCCGGCCGCCGAGAAGCGGGTGTAGCACTGGTTGTAGACGAGGATGGCGTCCCTGGTGCGGTTGCACGCCGGGGCGACGTCCTGGCCGGCCCTGGTGCCGCAGTCGTAGCAGTCGGAGGAGCTCACGTCGCCGCGGCAGAGGATGAGGCCGTAGACGGCGTCCGGGGCGGCGCCGAGCGCGCCGGCGGCGAAGAGAGTGGGCGACGTGGAGGCGTTCTGCTGGAGGGCGGCGATGAGGCTCTGGAGGTTGGTGTCGTAGGTGCTGTTCGCCGTGTACGTGCCGCCGCCGCCGCCTCCGCGGCGGCCGCAGAGCTGCCACGGCTGGCCGGCGGCGAGCGGGAGCGCGGCGGCCGCGAAGAGGAGAACGGCGAACGTGGAGCGCCGCCGCATGGCGCCCGTGGACGCAGCTGTCACAGTC
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| CDS seq | ATGCGGCGGCGCTCCACGTTCGCCGTTCTCCTCTTCGCGGCCGCCGCGCTCCCGCTCGCCGCCGGCCAGCCGTGGCAGCTCTGCGGCCGCCGCGGAGGCGGCGGCGGCGGCACGTACACGGCGAACAGCACCTACGACACCAACCTCCAGAGCCTCATCGCCGCCCTCCAGCAGAACGCCTCCACGTCGCCCACTCTCTTCGCCGCCGGCGCGCTCGGCGCCGCCCCGGACGCCGTCTACGGCCTCATCCTCTGCCGCGGCGACGTGAGCTCCTCCGACTGCTACGACTGCGGCACCAGGGCCGGCCAGGACGTCGCCCCGGCGTGCAACCGCACCAGGGACGCCATCCTCGTCTACAACCAGTGCTACACCCGCTTCTCGGCGGCCGGCGACTTCCTCGCCTCCGCCAACAACTCCGGCCAGGCGCCGCTCATGAACAGCGACAACGTCACCACCGCCGACGTCGCCGGCTACGACCGCGCCGTCACGGAACTCCTCAGCGCCACCCTGATGTACGCGGTAGTGAACACCACGAGGCTGTTCGCCACGGGGCAGCGGGTGGGCGCCGACCCGGGGTTCCCGAACATCTACTCGGCGGCGCAGTGCACGCCGGACCTGTCGCCGGCGCTGTGCCGGAGCTGCCTCGAGGACCTCGTCGCCAGGTGGTGGAAGACGTTCCCGCGGACCACGGTGGGGGCGAGGATCGTCGGCACGAGGTGCAGCTTGAGGTCGGAGGTATCCCAGGACAAGTTCTACACCGGAGCCCCGATGCTGAAGCTGTGGGCCGACGGCCTCTCGCCGGCGGCGGCGGCGGCGTCGCCGGATGCTGCGCCGGGCACTACGGGAGTCAAGAATAATTCAGCAAACAAAATTCTGGAAATCGTCTTGCCGATAGTGGCAGTTGCAATCGTAGCTGCAGTTTCCATCCTCTTGTGGAATATACGCAAGAAGAGAAGACGAGGGAAAGCAGAGCATTTCACCGGACCTGATGCAGCTGAGGACTTCGAAAGTGTCAAGTCAACCCTGCTATCTCTGGCATCACTGCAAGTAGCGACGGATAATTTCAATGAAAGCATGAAACTCGGCGAAGGGGGATTCGGTGCTGTTTATAAGGGGCTTCTTTTCAGACAAGACGTAGCAGTGAAGAGGCTAGCGAAGGGTTCAAACCAAGGGTTGGAAGAGGTGAAAAACGAGCTAGTTTTGGTGGCCAAACTTCATCACAAGAATCTTGTGCAGCTTGTGGGGTTTTGCCTAGAAGAGGGAGAGAGGATGCTCGTCTACGAGTACATGCCCAACAAAAGTCTCGACACCTTTCTTTTTGATGAAGAGAAAAGGAGACAGCTAGATTGGACTACACGATTTAGGATCATTGAAGGCATTGCTCGGGGCCTTCAATATCTCCATCAGGACTCCCAGAAAAAGATCGTACACCGAGACATGAAGGCGAGCAACATCTTGCTAGACGCAGACATGAACCCAAAGATTGGGGACTTTGGACTTGCTAGGCTCTTCGGACAAGACCAGACTCGAGAGATTACAAACCGCATCGTTGGGACATTTGGGTACATGTCTCCTGAGTACGTGACGCATGGGCAGTACTCCACGAAATCAGATGTGTTCAGCTTCGGCATTCTCGTCATAGAGATCGTGACGGGCCGGAGAAGGAACAACGGGCCCTATTTCTTTGAGCCAAACGAAGATATAATAAGCATAGTATGGAGGCACTGGGCAGAGGGAAACATTAAGGAGATCATAGATCACTCCTTGGGAAGAAACTACCCTGAAGGCGAGGTGCTAAAATGTGTTAACATTGGTCTCCTGTGTGTCCAGCAGAACCCTATAGATCGTCCAACAATGGCCGATGTCATGGTTTTACTTAATAGCGATGCTACTAGCACTCTGCCGGCCCCTGTAGTTCATATTCCAGTAGCATCTTTCTCCGATGGAAGCTCTGGTTATTCTCAAACCGTGACACAATTGTCTCCCAGGTAG
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| Protein seq | MRRRSTFAVLLFAAAALPLAAGQPWQLCGRRGGGGGGTYTANSTYDTNLQSLIAALQQNASTSPTLFAAGALGAAPDAVYGLILCRGDVSSSDCYDCGTRAGQDVAPACNRTRDAILVYNQCYTRFSAAGDFLASANNSGQAPLMNSDNVTTADVAGYDRAVTELLSATLMYAVVNTTRLFATGQRVGADPGFPNIYSAAQCTPDLSPALCRSCLEDLVARWWKTFPRTTVGARIVGTRCSLRSEVSQDKFYTGAPMLKLWADGLSPAAAAASPDAAPGTTGVKNNSANKILEIVLPIVAVAIVAAVSILLWNIRKKRRRGKAEHFTGPDAAEDFESVKSTLLSLASLQVATDNFNESMKLGEGGFGAVYKGLLFRQDVAVKRLAKGSNQGLEEVKNELVLVAKLHHKNLVQLVGFCLEEGERMLVYEYMPNKSLDTFLFDEEKRRQLDWTTRFRIIEGIARGLQYLHQDSQKKIVHRDMKASNILLDADMNPKIGDFGLARLFGQDQTREITNRIVGTFGYMSPEYVTHGQYSTKSDVFSFGILVIEIVTGRRRNNGPYFFEPNEDIISIVWRHWAEGNIKEIIDHSLGRNYPEGEVLKCVNIGLLCVQQNPIDRPTMADVMVLLNSDATSTLPAPVVHIPVASFSDGSSGYSQTVTQLSPR |
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| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0541800 | OsNip_07t0541800-01 | Chr07 | 21407942 | 21411687 | - | RAP2018-11-26 | ||
| CDS seq | ATGCGGCGGCGCTCCACGTTCGCCGTTCTCCTCTTCGCGGCCGCCGCGCTCCCGCTCGCCGCCGGCCAGCCGTGGCAGCTCTGCGGCCGCCGCGGAGGCGGCGGCGGCGGCACGTACACGGCGAACAGCACCTACGACACCAACCTCCAGAGCCTCATCGCCGCCCTCCAGCAGAACGCCTCCACGTCGCCCACTCTCTTCGCCGCCGGCGCGCTCGGCGCCGCCCCGGACGCCGTCTACGGCCTCATCCTCTGCCGCGGCGACGTGAGCTCCTCCGACTGCTACGACTGCGGCACCAGGGCCGGCCAGGACGTCGCCCCGGCGTGCAACCGCACCAGGGACGCCATCCTCGTCTACAACCAGTGCTACACCCGCTTCTCGGCGGCCGGCGACTTCCTCGCCTCCGCCAACAACTCCGGCCAGGCGCCGCTCATGAACAGCGACAACGTCACCACCGCCGACGTCGCCGGCTACGACCGCGCCGTCACGGAACTCCTCAGCGCCACCCTGATGTACGCGGTAGTGAACACCACGAGGCTGTTCGCCACGGGGCAGCGGGTGGGCGCCGACCCGGGGTTCCCGAACATCTACTCGGCGGCGCAGTGCACGCCGGACCTGTCGCCGGCGCTGTGCCGGAGCTGCCTCGAGGACCTCGTCGCCAGGTGGTGGAAGACGTTCCCGCGGACCACGGTGGGGGCGAGGATCGTCGGCACGAGGTGCAGCTTGAGGTCGGAGGTATCCCAGGACAAGTTCTACACCGGAGCCCCGATGCTGAAGCTGTGGGCCGACGGCCTCTCGCCGGCGGCGGCGGCGGCGTCGCCGGATGCTGCGCCGGGCACTACGGGAGTCAAGAATAATTCAGCAAACAAAATTCTGGAAATCGTCTTGCCGATAGTGGCAGTTGCAATCGTAGCTGCAGTTTCCATCCTCTTGTGGAATATACGCAAGAAGAGAAGACGAGGGAAAGCAGAGCATTTCACCGGACCTGATGCAGCTGAGGACTTCGAAAGTGTCAAGTCAACCCTGCTATCTCTGGCATCACTGCAAGTAGCGACGGATAATTTCAATGAAAGCATGAAACTCGGCGAAGGGGGATTCGGTGCTGTTTATAAGGGGCTTCTTTTCAGACAAGACGTAGCAGTGAAGAGGCTAGCGAAGGGTTCAAACCAAGGGTTGGAAGAGGTGAAAAACGAGCTAGTTTTGGTGGCCAAACTTCATCACAAGAATCTTGTGCAGCTTGTGGGGTTTTGCCTAGAAGAGGGAGAGAGGATGCTCGTCTACGAGTACATGCCCAACAAAAGTCTCGACACCTTTCTTTTTGATGAAGAGAAAAGGAGACAGCTAGATTGGACTACACGATTTAGGATCATTGAAGGCATTGCTCGGGGCCTTCAATATCTCCATCAGGACTCCCAGAAAAAGATCGTACACCGAGACATGAAGGCGAGCAACATCTTGCTAGACGCAGACATGAACCCAAAGATTGGGGACTTTGGACTTGCTAGGCTCTTCGGACAAGACCAGACTCGAGAGATTACAAACCGCATCGTTGGGACATTTGGGTACATGTCTCCTGAGTACGTGACGCATGGGCAGTACTCCACGAAATCAGATGTGTTCAGCTTCGGCATTCTCGTCATAGAGATCGTGACGGGCCGGAGAAGGAACAACGGGCCCTATTTCTTTGAGCCAAACGAAGATATAATAAGCATAGTATGGAGGCACTGGGCAGAGGGAAACATTAAGGAGATCATAGATCACTCCTTGGGAAGAAACTACCCTGAAGGCGAGGTGCTAAAATGTGTTAACATTGGTCTCCTGTGTGTCCAGCAGAACCCTATAGATCGTCCAACAATGGCCGATGTCATGGTTTTACTTAATAGCGATGCTACTAGCACTCTGCCGGCCCCTGTAGTTCATATTCCAGTAGCATCTTTCTCCGATGGAAGCTCTGGTTATTCTCAAACCGTGACACAATTGTCTCCCAGGTAG
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| Protein seq | MRRRSTFAVLLFAAAALPLAAGQPWQLCGRRGGGGGGTYTANSTYDTNLQSLIAALQQNASTSPTLFAAGALGAAPDAVYGLILCRGDVSSSDCYDCGTRAGQDVAPACNRTRDAILVYNQCYTRFSAAGDFLASANNSGQAPLMNSDNVTTADVAGYDRAVTELLSATLMYAVVNTTRLFATGQRVGADPGFPNIYSAAQCTPDLSPALCRSCLEDLVARWWKTFPRTTVGARIVGTRCSLRSEVSQDKFYTGAPMLKLWADGLSPAAAAASPDAAPGTTGVKNNSANKILEIVLPIVAVAIVAAVSILLWNIRKKRRRGKAEHFTGPDAAEDFESVKSTLLSLASLQVATDNFNESMKLGEGGFGAVYKGLLFRQDVAVKRLAKGSNQGLEEVKNELVLVAKLHHKNLVQLVGFCLEEGERMLVYEYMPNKSLDTFLFDEEKRRQLDWTTRFRIIEGIARGLQYLHQDSQKKIVHRDMKASNILLDADMNPKIGDFGLARLFGQDQTREITNRIVGTFGYMSPEYVTHGQYSTKSDVFSFGILVIEIVTGRRRNNGPYFFEPNEDIISIVWRHWAEGNIKEIIDHSLGRNYPEGEVLKCVNIGLLCVQQNPIDRPTMADVMVLLNSDATSTLPAPVVHIPVASFSDGSSGYSQTVTQLSPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35740 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0541800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018260 | RBH | 0.078265 | 0.449370 | 1.284169 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0018190 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0018190 | SBH | 0.0 | 26.989252 | 0.682892 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0018060 | SBH | 0.0 | 0.679471 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0018190 | RBH | 0.087802 | 5.833766 | 0.938656 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0351400 | SBH | 0.309316 | 19.3094625 | 2.687566 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018680 | RBH | 0.027168 | 0.262947 | 0.030122 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0361900 | RBH | 0.3760645 | 17.520449 | 0.218801 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017940 | SBH | 0.026354 | 0.135489 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0018110 | RBH | 0.0 | 12.922581 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0018010 | SBH | 0.0 | 12.870400 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018270 | RBH | 0.0 | 0.086985 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0018070 | RBH | 0.000000 | 3.457593 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017980 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0018050 | RBH | 1.373994 | 21.709854 | 0.0 |
