Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0535800 | OGI:07058620 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:21045118-21050483 | ||||||||
| Gene Symbol | Gnk2RLK-5 | ||||||||||
| DNA seq | TACGGAGAAAGCTGAGAAAGAAACACGCACTAATCAAACAATCTCTTCTTCTTCTTCTTCTTCTTCTGTTCACAAGCAATCAGAAAAGAAGAGGACACGCCATGTCCCTTCTCGTCGTCTTGTTCTTCTTCTTCCTCTCGCCGCCGCTCGCCGCCGCCGCCGCCTACACGGAGTACTCGTGCAATGGCACCCGGGGCAACTTCACGGAGGGGAGCGCGTTCGGGCTCAACCTGGAGCTCCTCGCGGCGGAGCTCCCCGCCAACGCGTCGTCGTCGCGGTCGCTGTTCGCGTCGGCGGCCGTGGGCGCCGCCGCGGCGCCGGAGGACAGGGTGTTCGGCCTGGCGCTGTGCCGCGGCGACATGAGGGACGCCGCCGCGTGCGCGGGGTGCGTCTCCGGCGCGTTCCAGCGCCTCCGCGCGCTCTGCGGCCGGGACCGCGACGCGACGTACTACCACGACCTGTGCGTGGTGCGCTACTCCGGCGACGACTTCCTGTCGCGGCCGGACGACAACTCGCCGGTGATCAACGCGCTGGACGCGAACGCGTCCACCTACTACGGGTGGGACGGGCGGAACGCGACGACGCGGAGCTTCTTCCTGTCGCTGGTGGGGACGCTGTTCGGGGAGATGGCCATGTACGGGTCGTACAACTCGTCGGCGCGGCGGTACGCGAGCGCCGTGATGTATGTGAACCCGCAGCTGCCGACGGTGTACGGGCTGGCGCAGTGCACGCCGGACCTGTCGCCGGCGCAGTGCTGGCACTGCTTCCAGGGGCTCCAGGAGCAGAACCGGCAGTGGTACGACGGCCGGCAGGGCGGCCGGATCCTCGGCGTCCGGTGCAACTTCCGGTACGAGAGCTACCAGTTCTACGCCGGCACGCCGGACGTCAGGATCGGCCTGCAAGACGTCGCACCCTCACCAACCGCAAACAATGGTAACAACCAACACATATGCTACACACACGATCATTTCTTCTCCTCCGAATAAATTTGCTCAAAAGCTATAGTTGGAGCTTAACTACTATTGTTGTACGTTGTTATAAATGTTAAACTTTTGACCATATTGATTGTGTTTTTTTTTTGGAATTATTGGAGCTTAGATTGAAGGAAGGGTCCATATCAATTAAAACTTGCTAGTAGTAATTATTAATTTTGAATTTGGGGGTTACGTTTATATACTATTAATAAGAGATTTCATGATTGTCCAGCTTATATGCATGGTATTAATTTTAATGTCATCTTTTTATTTAACTCAAATTCTGAATACAATCTATGGCATGATAATATAATCCACCTAATCAACAACCAGATCTTTCATTTTAACATGAGAGATCTCATAGTGCTTAATTAGTATAAGGTGTAAACAGATAGATTTGTTACATAGGGGCTGTTCAGATTATATCATTTTCAATCATAATATTTTTTTCGGTAAAGTTACTTAAAAAATGCCTATATTTAGTTGTTGCCAAACATTGGTAAATATATAAAAAATCCTGCTAAAATTTTAGTAATATTGTCAACTTGCCAAAAATATCAAATTTTGGTAAAATTTATTTTGACTACGATCTGAACGCCCCATAAATTTGTTTGAATTGGCAAAGACAAATCATATTATTATTACTATTACTGTCATGTTTGGTTGTGAGCTCACAATGGTCAAATACGTAACCACTTAATGGTGGTGTTTTCTGTCAGTGCATTATCTTTTCTACAAATAACATTGAAACAATCTCTGTATGATCACTACTAATTTTCTTCTTTATTTATGCAGGAACCAACCACAGGAAGACCTTAGTTATCGTTCTATCCGTGTCAATCACGGTCTTCTGTTTCATGCTGGTCGGCTGCCTCCTACTGATAAAAAAACTACGGAAAGGAGACGGTAACAACACGATGCCACTAACTCCCTCTCATAATGAACATCATTTTCTCCCTCCATTTCAGCATCACAAAGTTCTTAATTAATCAACCAAACCACAAATGTCCAATCCATCATTGATCACAGGGAGGAAGTCGAATCGGCAGCTGGAAGCACATTCCAGGAACAGCTCCAAGACAGAGGAGGCACTGAAGCTGTGGAGGACCGAGGAGAGCAGCACCGATTTCACGCTCTACGACTTCGGCGATCTTGCCGCTGCCACGGACAACTTCTCTGAAGATCACAGGCTCGGCACAGGCGGATTTGGACCTGTCTACAGGGCAAGTTATCTGAAACTCCTATAATTTTTGTTTTTACAGTCGATTTTTGACCAAAATGTGTGAATGGTTGTCGCTATATATGCTAATAATCTGCGGCATCATAGTTGCTGTCCCTATTGTTTAGCAGTCAATGTTGACGAAAATGCGGATGACTTGGTGATGCTAACATGCATGATTATTATTTGCTTTGTCTGTTCGTGTTTTCAGGGTGAGTTGTCTGATGGAGCCGAGATTGCGGTGAAGAGGCTGGCAGCGCAGTCCGGGCAGGGGCTGAAGGAATTCAAGAACGAGATCCAGCTCATTGCCAAGCTGCAGCACACCAACCTCGTCAGGCTCGTTGGCTGCTGTGTTCAGGAGGAGGAGAAGATGCTGGTCTACGAGTACATGCCCAACAGAAGCCTGGACTTCTTCATCTTCGGTATTATTCTCTCTTTTTGTTCAATACAATCTTCGTCCAAAATTATACTTAACAATTTACAATTTAGACATACAGTTGTGTAGATTCATATCTATAAATGCTTATATTTCGGAACGGATGGAGTAGACAGGGGCGGAGCTAAAATTTTCTCAAGCTTAGGACTAAATTAGTGTAATTTTCATATGTTCGTCGAATACTAATATTTGAGATATGAAATTGAGTTTTTTTATAGATTAAAAACTTTTTATCATTTTCATAACTATGCGATTAATTAAAAACAATAACACAAAAGCAAATGCCCTGAATATATAACAGGTAAAAAGGGAAAAGACAATTACTTTTGTTTGTAGTCCACTTGATCAAACAGCGTGTCAAACTGCTGTTAAAAAAAATCAACGTGCCAAAATTTCAAAAGACTATGTTACCGTCGACGTTTTACTCATCTTCCGATTTTCCTAATCCTTTCTATCTTTTTCAAGTACGGTTTAGGAAAGAAAATGTATATTGCCAAATGGTTTCCATATCCAAATGGTTTCCATATCCAAATGGTTTCCTAATTAAACAAGTAAAAAAAAGTGAAATGGATTACTTCTGAACGACTTTGTTACCGTCAACGTTTTACTAATCTTCGATAATGTTTTCACGCATGTAGACCAGGAGCAAGGGCCATTGCTGGACTGGAAGAAACGGCTGCACATAATCGAGGGCGTCGTGCAGGGGCTCCTCTACCTTCACAAGCACTCACGTGTACGCATCATCCACCGCGATCTCAAGGCCAGCAACATACTCCTCGACAAGGACCTCAATCCTAAGATCTCCGACTTCGGCATGGCCAGGATCTTCGGCTCCAACATGACTGAAGCCAACACCAACAGAGTCGTCGGCACCTAGTAAGAAAAAGAATAATGATATATATCGTAGCAATACTTATCATTTTAATTACACTCCTATTTTAAATTACTTAGCATTTTAATTTTTTTTAAGTTCAAACATTCGTAAATTTAACCATCAATTACTAAAACATTATAAAGTTTAGCATCATAATATTTATGTTTTTATTCACCATGAGATGTAATTTTTATAATATATAATTGACATGTTACTAATTAAACTATATAAACACTTAAAATGACTTTAAATAAACTAAAGTAACAAGTAAATTAAAACGGAGAGAGTACTGGTAATCTGGTATTAAGTTTTAGCATGTCAACTGGCTGGGCAAATTGATTAATAGCCGTGATGTTTTCCTTCAGGTGTTTGTACCTTTATTTTTGGAGGATAAGATCAGGTACCTGCAGTACTGTACTTACTAGCTAGTGGTATTGATTGTTGTTTTGGTGTTCACGTGTGCAGTGGATACATGGCTCCTGAGTACGCATCGGAGGGCATTTTCTCGGTCAAGTCCGACGTGTTCAGCTTCGGCGTGCTGCTGCTGGAGATCGTCAGCGGCAAGAGGAACAGCGGCCACCAGCACTACGGCGAATTCGTCAACCTCCTCGGATACGTACGTTTTTACGTTGTTTTTTCTATCTTAATTTCTTTTTCTCTCTCGCTGAAATAATGGCGTGTTACTATTCTAGTACGACCTTTTTGTGTGTGTGTTCTTAATCAAAACCGTACTTGTCGTCCGTGGATTAATAAATGGGCACGCGGCTTATCCTGTACAATTATCAATTATGTCGAAACGTTTTCACGTCTACACTGTAGCTACGTTTGACTTACGCTAGCTAGCAACATGATTAGTCATCACTAACGAGGATTAATAAATTGGTTGATCAACTTGGCATCTTTTTCAATAACTTTATCGTGCTCTCTACTGTTACAATTATATTCCGATTATATATATTATCATCAGCTGATTCTTCTATAATATAATCTGAGCTATTAATTTATGAATTCCAATACTAATAATTAAAAGATGTACTATAAATAAATACTACTATCTATTAGAATATAAAAGATTTATATATTTCAAACATAGAGTTTTTTTAAAAAATATATTATTATTTTTTGTCAGGCGTGGCAGCTGTGGAGAGAAGAGAGAGGGTGCGAGCTGATCGACCCGACGCTGGGCGAGTGCAGCGGCAGCGAGGCGGCGGCCATAATCCGGTGCGTGAAGGTGGCGTTGCTGTGCGTGCAGGACAACGCGACGGACCGGCCGACGATGACGGACGTGGCGGCGATGCTCGGCAGCGACGGCGTCCCCCTGCCGGACCCGCTGCCGCCGCCGCACTACCAGCTGAGGGTCTCCGGCGACGACTACGACGACGGCGGCCGCGGGTCGCCGGCCGGCGGCGGCTTCCGGCCGTCGCGGTGGCGCTTCACCGACTCGTGCAGCACCAACGACGTCACCATCACCACCATCGAGGAAGGGAGATAATAGCGGTCGATCGATCTCACCGGCATTTCGATCATTACGTTTACGCGTTCGCTGGCTGGCCTTCACATGTGGCCAACGCGTCCTTTTCGTGAGACATCTGTGAGTGAGTGTACTCCACTTGTGGTCGATCGAAGTCGAAGATAGGCAGGGCGCAACAGTGGTGGTTGGCATGGTTGCATCACCGTATGGATGTTACGTCGTTGTACAGAGACAACTCGTATATGGGGATGAGTACCTGAGCGGCTGAGCCAACAAAGAGGGTGTTTTTTTTTTTTCTTTTGTACAACTTTTGTGTGAAGAGTGTACGACTAAAGCTGGTACGTACAGTGTTTGTTGATGGATGAAAAGAAAGTACAAGGATGGTTGGATGC
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| CDS seq | ATGTCCCTTCTCGTCGTCTTGTTCTTCTTCTTCCTCTCGCCGCCGCTCGCCGCCGCCGCCGCCTACACGGAGTACTCGTGCAATGGCACCCGGGGCAACTTCACGGAGGGGAGCGCGTTCGGGCTCAACCTGGAGCTCCTCGCGGCGGAGCTCCCCGCCAACGCGTCGTCGTCGCGGTCGCTGTTCGCGTCGGCGGCCGTGGGCGCCGCCGCGGCGCCGGAGGACAGGGTGTTCGGCCTGGCGCTGTGCCGCGGCGACATGAGGGACGCCGCCGCGTGCGCGGGGTGCGTCTCCGGCGCGTTCCAGCGCCTCCGCGCGCTCTGCGGCCGGGACCGCGACGCGACGTACTACCACGACCTGTGCGTGGTGCGCTACTCCGGCGACGACTTCCTGTCGCGGCCGGACGACAACTCGCCGGTGATCAACGCGCTGGACGCGAACGCGTCCACCTACTACGGGTGGGACGGGCGGAACGCGACGACGCGGAGCTTCTTCCTGTCGCTGGTGGGGACGCTGTTCGGGGAGATGGCCATGTACGGGTCGTACAACTCGTCGGCGCGGCGGTACGCGAGCGCCGTGATGTATGTGAACCCGCAGCTGCCGACGGTGTACGGGCTGGCGCAGTGCACGCCGGACCTGTCGCCGGCGCAGTGCTGGCACTGCTTCCAGGGGCTCCAGGAGCAGAACCGGCAGTGGTACGACGGCCGGCAGGGCGGCCGGATCCTCGGCGTCCGGTGCAACTTCCGGTACGAGAGCTACCAGTTCTACGCCGGCACGCCGGACGTCAGGATCGGCCTGCAAGACGTCGCACCCTCACCAACCGCAAACAATGGAACCAACCACAGGAAGACCTTAGTTATCGTTCTATCCGTGTCAATCACGGTCTTCTGTTTCATGCTGGTCGGCTGCCTCCTACTGATAAAAAAACTACGGAAAGGAGACGGGAGGAAGTCGAATCGGCAGCTGGAAGCACATTCCAGGAACAGCTCCAAGACAGAGGAGGCACTGAAGCTGTGGAGGACCGAGGAGAGCAGCACCGATTTCACGCTCTACGACTTCGGCGATCTTGCCGCTGCCACGGACAACTTCTCTGAAGATCACAGGCTCGGCACAGGCGGATTTGGACCTGTCTACAGGGGTGAGTTGTCTGATGGAGCCGAGATTGCGGTGAAGAGGCTGGCAGCGCAGTCCGGGCAGGGGCTGAAGGAATTCAAGAACGAGATCCAGCTCATTGCCAAGCTGCAGCACACCAACCTCGTCAGGCTCGTTGGCTGCTGTGTTCAGGAGGAGGAGAAGATGCTGGTCTACGAGTACATGCCCAACAGAAGCCTGGACTTCTTCATCTTCGACCAGGAGCAAGGGCCATTGCTGGACTGGAAGAAACGGCTGCACATAATCGAGGGCGTCGTGCAGGGGCTCCTCTACCTTCACAAGCACTCACGTGTACGCATCATCCACCGCGATCTCAAGGCCAGCAACATACTCCTCGACAAGGACCTCAATCCTAAGATCTCCGACTTCGGCATGGCCAGGATCTTCGGCTCCAACATGACTGAAGCCAACACCAACAGAGTCGTCGGCACCTATGGATACATGGCTCCTGAGTACGCATCGGAGGGCATTTTCTCGGTCAAGTCCGACGTGTTCAGCTTCGGCGTGCTGCTGCTGGAGATCGTCAGCGGCAAGAGGAACAGCGGCCACCAGCACTACGGCGAATTCGTCAACCTCCTCGGATACGTACGTTTTTACGTTGTTTTTTCTATCTTAATTTCTTTTTCTCTCTCGCTGAAATAA
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| Protein seq | MSLLVVLFFFFLSPPLAAAAAYTEYSCNGTRGNFTEGSAFGLNLELLAAELPANASSSRSLFASAAVGAAAAPEDRVFGLALCRGDMRDAAACAGCVSGAFQRLRALCGRDRDATYYHDLCVVRYSGDDFLSRPDDNSPVINALDANASTYYGWDGRNATTRSFFLSLVGTLFGEMAMYGSYNSSARRYASAVMYVNPQLPTVYGLAQCTPDLSPAQCWHCFQGLQEQNRQWYDGRQGGRILGVRCNFRYESYQFYAGTPDVRIGLQDVAPSPTANNGTNHRKTLVIVLSVSITVFCFMLVGCLLLIKKLRKGDGRKSNRQLEAHSRNSSKTEEALKLWRTEESSTDFTLYDFGDLAAATDNFSEDHRLGTGGFGPVYRGELSDGAEIAVKRLAAQSGQGLKEFKNEIQLIAKLQHTNLVRLVGCCVQEEEKMLVYEYMPNRSLDFFIFDQEQGPLLDWKKRLHIIEGVVQGLLYLHKHSRVRIIHRDLKASNILLDKDLNPKISDFGMARIFGSNMTEANTNRVVGTYGYMAPEYASEGIFSVKSDVFSFGVLLLEIVSGKRNSGHQHYGEFVNLLGYVRFYVVFSILISFSLSLK |
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| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0535800 | OsNip_07t0535800-01 | Chr07 | 21045118 | 21049397 | + | RAP2018-11-26 | ||
| CDS seq | ATGTCCCTTCTCGTCGTCTTGTTCTTCTTCTTCCTCTCGCCGCCGCTCGCCGCCGCCGCCGCCTACACGGAGTACTCGTGCAATGGCACCCGGGGCAACTTCACGGAGGGGAGCGCGTTCGGGCTCAACCTGGAGCTCCTCGCGGCGGAGCTCCCCGCCAACGCGTCGTCGTCGCGGTCGCTGTTCGCGTCGGCGGCCGTGGGCGCCGCCGCGGCGCCGGAGGACAGGGTGTTCGGCCTGGCGCTGTGCCGCGGCGACATGAGGGACGCCGCCGCGTGCGCGGGGTGCGTCTCCGGCGCGTTCCAGCGCCTCCGCGCGCTCTGCGGCCGGGACCGCGACGCGACGTACTACCACGACCTGTGCGTGGTGCGCTACTCCGGCGACGACTTCCTGTCGCGGCCGGACGACAACTCGCCGGTGATCAACGCGCTGGACGCGAACGCGTCCACCTACTACGGGTGGGACGGGCGGAACGCGACGACGCGGAGCTTCTTCCTGTCGCTGGTGGGGACGCTGTTCGGGGAGATGGCCATGTACGGGTCGTACAACTCGTCGGCGCGGCGGTACGCGAGCGCCGTGATGTATGTGAACCCGCAGCTGCCGACGGTGTACGGGCTGGCGCAGTGCACGCCGGACCTGTCGCCGGCGCAGTGCTGGCACTGCTTCCAGGGGCTCCAGGAGCAGAACCGGCAGTGGTACGACGGCCGGCAGGGCGGCCGGATCCTCGGCGTCCGGTGCAACTTCCGGTACGAGAGCTACCAGTTCTACGCCGGCACGCCGGACGTCAGGATCGGCCTGCAAGACGTCGCACCCTCACCAACCGCAAACAATGGAACCAACCACAGGAAGACCTTAGTTATCGTTCTATCCGTGTCAATCACGGTCTTCTGTTTCATGCTGGTCGGCTGCCTCCTACTGATAAAAAAACTACGGAAAGGAGACGGGAGGAAGTCGAATCGGCAGCTGGAAGCACATTCCAGGAACAGCTCCAAGACAGAGGAGGCACTGAAGCTGTGGAGGACCGAGGAGAGCAGCACCGATTTCACGCTCTACGACTTCGGCGATCTTGCCGCTGCCACGGACAACTTCTCTGAAGATCACAGGCTCGGCACAGGCGGATTTGGACCTGTCTACAGGGGTGAGTTGTCTGATGGAGCCGAGATTGCGGTGAAGAGGCTGGCAGCGCAGTCCGGGCAGGGGCTGAAGGAATTCAAGAACGAGATCCAGCTCATTGCCAAGCTGCAGCACACCAACCTCGTCAGGCTCGTTGGCTGCTGTGTTCAGGAGGAGGAGAAGATGCTGGTCTACGAGTACATGCCCAACAGAAGCCTGGACTTCTTCATCTTCGACCAGGAGCAAGGGCCATTGCTGGACTGGAAGAAACGGCTGCACATAATCGAGGGCGTCGTGCAGGGGCTCCTCTACCTTCACAAGCACTCACGTGTACGCATCATCCACCGCGATCTCAAGGCCAGCAACATACTCCTCGACAAGGACCTCAATCCTAAGATCTCCGACTTCGGCATGGCCAGGATCTTCGGCTCCAACATGACTGAAGCCAACACCAACAGAGTCGTCGGCACCTATGGATACATGGCTCCTGAGTACGCATCGGAGGGCATTTTCTCGGTCAAGTCCGACGTGTTCAGCTTCGGCGTGCTGCTGCTGGAGATCGTCAGCGGCAAGAGGAACAGCGGCCACCAGCACTACGGCGAATTCGTCAACCTCCTCGGATACGTACGTTTTTACGTTGTTTTTTCTATCTTAATTTCTTTTTCTCTCTCGCTGAAATAA
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| Protein seq | MSLLVVLFFFFLSPPLAAAAAYTEYSCNGTRGNFTEGSAFGLNLELLAAELPANASSSRSLFASAAVGAAAAPEDRVFGLALCRGDMRDAAACAGCVSGAFQRLRALCGRDRDATYYHDLCVVRYSGDDFLSRPDDNSPVINALDANASTYYGWDGRNATTRSFFLSLVGTLFGEMAMYGSYNSSARRYASAVMYVNPQLPTVYGLAQCTPDLSPAQCWHCFQGLQEQNRQWYDGRQGGRILGVRCNFRYESYQFYAGTPDVRIGLQDVAPSPTANNGTNHRKTLVIVLSVSITVFCFMLVGCLLLIKKLRKGDGRKSNRQLEAHSRNSSKTEEALKLWRTEESSTDFTLYDFGDLAAATDNFSEDHRLGTGGFGPVYRGELSDGAEIAVKRLAAQSGQGLKEFKNEIQLIAKLQHTNLVRLVGCCVQEEEKMLVYEYMPNRSLDFFIFDQEQGPLLDWKKRLHIIEGVVQGLLYLHKHSRVRIIHRDLKASNILLDKDLNPKISDFGMARIFGSNMTEANTNRVVGTYGYMAPEYASEGIFSVKSDVFSFGVLLLEIVSGKRNSGHQHYGEFVNLLGYVRFYVVFSILISFSLSLK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0535800 | OsNip_07t0535800-02 | Chr07 | 21045119 | 21050483 | + | IsoSeq | ||
| CDS seq | ACGGAGAAAGCTGAGAAAGAAACACGCACTAATCAAACAATCTCTTCTTCTTCTTCTTCTTCTTCTGTTCACAAGCAATCAGAAAAGAAGAGGACACGCCATGTCCCTTCTCGTCGTCTTGTTCTTCTTCTTCCTCTCGCCGCCGCTCGCCGCCGCCGCCGCCTACACGGAGTACTCGTGCAATGGCACCCGGGGCAACTTCACGGAGGGGAGCGCGTTCGGGCTCAACCTGGAGCTCCTCGCGGCGGAGCTCCCCGCCAACGCGTCGTCGTCGCGGTCGCTGTTCGCGTCGGCGGCCGTGGGCGCCGCCGCGGCGCCGGAGGACAGGGTGTTCGGCCTGGCGCTGTGCCGCGGCGACATGAGGGACGCCGCCGCGTGCGCGGGGTGCGTCTCCGGCGCGTTCCAGCGCCTCCGCGCGCTCTGCGGCCGGGACCGCGACGCGACGTACTACCACGACCTGTGCGTGGTGCGCTACTCCGGCGACGACTTCCTGTCGCGGCCGGACGACAACTCGCCGGTGATCAACGCGCTGGACGCGAACGCGTCCACCTACTACGGGTGGGACGGGCGGAACGCGACGACGCGGAGCTTCTTCCTGTCGCTGGTGGGGACGCTGTTCGGGGAGATGGCCATGTACGGGTCGTACAACTCGTCGGCGCGGCGGTACGCGAGCGCCGTGATGTATGTGAACCCGCAGCTGCCGACGGTGTACGGGCTGGCGCAGTGCACGCCGGACCTGTCGCCGGCGCAGTGCTGGCACTGCTTCCAGGGGCTCCAGGAGCAGAACCGGCAGTGGTACGACGGCCGGCAGGGCGGCCGGATCCTCGGCGTCCGGTGCAACTTCCGGTACGAGAGCTACCAGTTCTACGCCGGCACGCCGGACGTCAGGATCGGCCTGCAAGACGTCGCACCCTCACCAACCGCAAACAATGGAACCAACCACAGGAAGACCTTAGTTATCGTTCTATCCGTGTCAATCACGGTCTTCTGTTTCATGCTGGTCGGCTGCCTCCTACTGATAAAAAAACTACGGAAAGGAGACGGGAGGAAGTCGAATCGGCAGCTGGAAGCACATTCCAGGAACAGCTCCAAGACAGAGGAGGCACTGAAGCTGTGGAGGACCGAGGAGAGCAGCACCGATTTCACGCTCTACGACTTCGGCGATCTTGCCGCTGCCACGGACAACTT
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| Protein seq | TEKAEKETRTNQTISSSSSSSSVHKQSEKKRTRHVPSRRLVLLLPLAAARRRRRLHGVLVQWHPGQLHGGERVRAQPGAPRGGAPRQRVVVAVAVRVGGRGRRRGAGGQGVRPGAVPRRHEGRRRVRGVRLRRVPAPPRALRPGPRRDVLPRPVRGALLRRRLPVAAGRQLAGDQRAGRERVHLLRVGRAERDDAELLPVAGGDAVRGDGHVRVVQLVGAAVRERRDVCEPAAADGVRAGAVHAGPVAGAVLALLPGAPGAEPAVVRRPAGRPDPRRPVQLPVRELPVLRRHAGRQDRPARRRTLTNRKQWNQPQEDLSYRSIRVNHGLLFHAGRLPPTDKKTTERRREEVESAAGSTFQEQLQDRGGTEAVEDRGEQHRFHALRLRRSCRCHGQL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.777753 | 0.202963 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0534700 | SBH | 0.693196 | 0.740099 | 0.261145 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35140 | RBH | 0.655188 | 0.206238 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0535800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0017930 | RBH | 0.181644 | 0.000000 | 0.607245 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017830 | RBH | 0.170847 | 0.416738 | 0.308468 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017790 | RBH | 0.000000 | 0.000000 | 1.224802 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017710 | RBH | 0.032530 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017840 | RBH | 3.500088 | 4.658581 | 2.608080 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0343300 | RBH | 0.668673 | 18.9310675 | 0.12266 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018320 | RBH | 0.149483 | 0.244548 | 0.106316 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358000 | RBH | 1.5613895 | 13.752878 | 0.0401975 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017580 | RBH | 0.071582 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017740 | RBH | 0.236388 | 2.909580 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017620 | SBH | 0.283242 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0017960 | RBH | 0.000000 | 0.103406 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017730 | RBH | 0.000000 | 1.803210 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017720 | RBH | 0.0 | 0.000000 | 0.384630 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017600 | RBH | 0.416314 | 0.000000 | 0.0 |
