Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_06g0707733 | OGI:06083830 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr06:29927274-29931821 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAGTACTTTCTGTCTTGGATGATCGGAATGGTTCCTCTTAGCTTACGGCACTGTCTTTTGAGCTCCTCGTTTTTGCTCTCACTGACATCTAATACTTTTAGTGATCTCGGAAGACCGCCCTTGGGCAGCAAACGGATGGCTGGACACAAGGCGATCTCTAATCTCTTGAGGCGGGTGAGCCTGTGTAGCCCTGTTGGGAGGAATCGCAGCTTCGAGTAACACCAAAATCGGAGGTCCTGGAGAGAGGAGAGGAGCAGAAGGGCCGCGTTTTGCCCCTTGGTGAAGTGCTCCACCTCGTCGTTCCAGCCAATGGTTAGCTCGGTGAGTGAGGAAGCGAGAATGTTGCAGACAGGGGCAACAAGGAGCCATGTGATGTCATCCGTTTTTAGTTGCAATAATAGCGAGAGGTCGGATCCGACGAAGAAGTTGGGGGACCTCCGGACATCTAGCTCTTTGAGTTGGCCATGGGCGATGAGAGAACTCAAGCCATCAGCTCTTAAATCCCCAAAGTCCCATATGGCTAACTTAGCAAGAGAATTGAGGTTAGAGAGGGGTGACAGAGTATTCATCCCACTCATATAACTAAGAAACAGTTCTTGCAGGGAGGACGGAAATGGGGAATGATGCGAGGAGGACGAGTAGGAGGACAAGAAATTGGGGCAATTCCATATATTCAAATTTTTTATGGAGTGCAGACCTTGTAATCCTTCTCCTACGCCTCTGAGGCCTCCTGCCGTGTCAAATACTAATGCCAGCTCTGACATTTCCCCGATAGTCAAATACTGAAGTTGCTGAGGTAAGAGCAGCAGCCCTCCATCTGCGGCTGCTTTCTCATCCTCCTCTCCTGGTTCTTGCTGCTCCTGTCCGAGACATTCATCCTCCAACTTACTACCAGCAGACGGCAATGACGATGCTGACATTGCTGTCATCCCCTGCTTCGCCACACCAAGCCCTCTTATATTCTCACATCCCCTTATTACAAACATTGAGAGCTTGGGGAAATGGGATGACAACAGTGTCAATTCCTTCCCGCTACAACTACAGTTAAAGATCCTAAGTTTCTCAACAGGAAATTGGTATCTGACAGTGTTCTCGGCTTTGTCCTGCAACAAGACATTACTCAAGTCTTGCATACAGAGCATCCTCAATGATGACAGACTCTGTAGGTGTTCCAATGGCAAAGGAGGGCACTTTGTCAACGTCAACTCTTTTAGCTCAGTTAGATTACTGAACACCAATAACCTCCAGAATGCACTATCTAGATTGTCGTCCTTTCCCTTAACTAGCAAGCATAATTCAGATTGGTTATTTGTTGAGTAATCCAACTGCTGAAAATCCGATCCCACTTCTTCAATATAAGCATGGCATGGACAGCTTGTCCAAGGAATGGGAGGCAATGATGACAACTTTTGACAATTTACAATCTCAAGCTTCTTTAGTGTAGGGAATTGGGTCAGGTTTGTCCCTTGTTCTGGCCGAGAGCAAGTGGTGGGATGTGAAAATGGCAACTCCATCAGTTCAGGGCAATCTCTTACGATGAGCACCTCTAGCAGGGAGAACACATGGCAAGCATCATTTCCAGCCCATTTTGACAATCTTGGTATGGCAACTAGCTCCAACCTTTTTAAATTCGGAAAGCTCCGATCTGTTGTACAATCCAAGGATTTATGACCATGCTCATTAACCAATGACAACTCCCCTATAGGCGGGAAATTGTTCCAGTCGACACAATTCAGACGAAGAGATTTCAAACCTTTCATGGACAAGTTAACACCCAACCATGATGGGCAAGTGGCGCCACCATGCCCATTAATGTGTAGCTCCAGGAGATTGCTATGTGGTTTAAGATTTTCCAGGATATGTTCTTCTTGTGAAGGATCATTTGTCGAACGCTTAATATCCCAATCTAATATTAGCTTGTGTAAGCGACTTTTGTTTAAAAGTTCTGCCTCCTTTGCTGCCTTCACATTTTCAAGATTATAGATGCCCAATGATCCTTTTAGGTCTTCCAACTGCCCTAGTTGTCTTAATGCAAATGCCTCAACCTGTCTTTTGACTTCAAATCTCCTTAGTTCTTGTAAACATTTCAGCTTTCCCACACTAGTAATGTCGGAGTGGAGATTATCGTATGGGACAAGAAAATGCCGTAGCCTTACAAGATTATTCATGTCTCTTGGTAAACCAAAGTGACCCCTGCATTGTTGTAAATCAAGGATCCTTAAGTGATAAAATCTTGAAATGGTATTGGGTAGACTCATTTCTGGGAAATATCCCTTATTAATCCTTAAGTAGCGCAAATGAATAAGATTTGAAAAGTTGTGCAACATATTTTCCACCACGTAAGATGGTGCATACAACAAGACGACGCGGAGTGCTTTTGCTTTGCTTAACAAATTACCAAGAGGAATGACAAAGCTTCCATGGTATTGTCCAAATAGCATCACAGAGTGAAGCTTTTCAATATCCAATTGCTTATGCAGTGTGCTGAAATCCTTCTTGATGTTTTCAAAAGTCACTCTATCATTTACATCCACATCATCTATCACAATAGACAAGTGCCGTATAGATGGTGGAACTTGAATAGATCTCACATTAGAACTACTTATAGCAAGACATTCATATGATGAAACCTTCAATGCTAACTCATGCAGCAAATCAGGCATAACGTAGTAAGGAGACCCATCATTTTGTTCATCTTTTTTGAAAAATCCATAACTAACCAAGTCATTCAAATAGTTCAATCCTATGTCTTCGGTTCTTGTATTTTGATCATGTGAATGCAAAATGTCTAGTCCTATCCATAAGTGAATCAATTGCTCACTGTCAAAGATGTAATCTTCAGGGAACAAAGCACAATATGTAAAACATTGTTGTAGATGGAAAGGGAGATAGTCATAGCTAAGCTTTAATGCCGGCATAATATCATTCTTACCAGTTTGTAATTCCCATTCTTTACTATCTAGGATTCCTGTCCAATGATCAATATCAAGGTGCTTTCTCAACAATCTTCCTACAGTTTTTGCCGCCAAAGGGGAGCCCTTCAATTTTTTGGCTATCATTTTTCCAGTCTCTTGTAAGTTACCATGATCATTTACTGTTTTCTCATCGCCAAAAGCATATGCTTTGAATAATTCCCAAAACATTTTAGGTTCCAGCCCTTCCAATTGTATTGAACAATTAGTTGTTTTAACCATTTCCGCAACCGCTGGAAAACGAGTGGTGACTACAATTATGTTTCCCTTTGATTGTGCTTTTTTGAGGGGTGCTAATAGCTGCTTCCACTCATCCTCATAAACCAAATTCCATATATCATCCAGGACAAGCAAAAATCTCTTTGATTTCAACCTTTGCTCAATCAAATCATCCGGCCAACCAGAGTTCTCTTCATTGACTTTTGGTATCGACTTGGCAATCTCCTCTTTCAATCTATACACATTGAAATTGAGAGAGACACAAACCCAAATATTAACATCAAAATGGTTTTGTACTTCTTTGTATATTTGCTGAGTGAGAGTTGTCTTTCCTATCCCTCCTGGACCAACAATTGGAATGACGGTTAGGTCCACGTCACAGTAATCACCCTCAATAACGTCATTGATAATTGTACTTTTCTCACCCTCCCTCCCATAAAATTTAGGTTCTATGAAATCTGAAGTGGTCACAGGACGATTCATAGCAATGCTGCTTGGAAGAACAACTGCATGCCCCATTTTCCCAGAGAACTCAGAATTCAGACTCATTGCAATGCACTGGCCAATGCTGCGGTTTGATTCCAGCAACTCCAGGTTAAGGATGGTGGCGACCTTGGCACAGACTGGTTTTAGCTGCTCGACGATGTGCTTCATTCTTGTCGACAGATCCACCCTATCAAACTTCAGCTTTGGTGTTTTCGTGGTGTGCTCTATGTGCAATGCTTTGCAGGGATAAGCGCAGCAGAGGAACCGGCTTCTTTCTGTAGAAATGTTTCAACGGTGATGAAGGTGTCACAGCCGTCATGTTCAGTTACAAAAGAGAGGCGTGGAAGGTGTTTTATATTATCGATGAGATAGATAGTAAGTAGTACCTCGAGCATTGGAAAAGAGCTTGTGAATACAGCCGCTGCCTGCAAGTGCCTCCTCATCATTGGCATGGCGACTCTCTTCCCCATTATCTCCGCATGAGCACGCCTTCTTCTTGATGTTTCTGACTGTGTGGCGTGTGTTGAGCACGAGTCCTTGGAGACAGCCCTTGGCGTGCTCTTCGGCGGCCTCATAGGTGCCATCAAGCTCGTCCTGGATACGGAAGTAGTCGAGCTCGTCCAGCACATCCTCGGCGTTGTAGGCGAGGCCACGGAGCTCCAGGAGCAGCTGCTGCAGCGCGGGGTTGCTGGTCTCTCTGCCGCGGGCATTGTGCAGCATCCCCTGCGCGTAGAGCAGCTCCGTCTTGATGGCGCCGATGTTGGGGCCGAGCTCCGTGCTAGCGGCCCACGCCTCCACGAGCCCTCCGGACAGCGGGCTCAGCGCCTTGCCGACCACCCACCGCGCCGCGTTCACGGCCACCGACTCCAT
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| CDS seq | ATGGAGTCGGTGGCCGTGAACGCGGCGCGGTGGGTGGTCGGCAAGGCGCTGAGCCCGCTGTCCGGAGGGCTCGTGGAGGCGTGGGCCGCTAGCACGGAGCTCGGCCCCAACATCGGCGCCATCAAGACGGAGCTGCTCTACGCGCAGGGGATGCTGCACAATGCCCGCGGCAGAGAGACCAGCAACCCCGCGCTGCAGCAGCTGCTCCTGGAGCTCCGTGGCCTCGCCTACAACGCCGAGGATGTGCTGGACGAGCTCGACTACTTCCGTATCCAGGACGAGCTTGATGGCACCTATGAGGCCGCCGAAGAGCACGCCAAGGGCTGTCTCCAAGGACTCGTGCTCAACACACGCCACACAGTCAGAAACATCAAGAAGAAGGCGTGCTCATGCGGAGATAATGGGGAAGAGAGTCGCCATGCCAATGATGAGGAGGCACTTGCAGGCAGCGGCTGTATTCACAAGCTCTTTTCCAATGCTCGAGAAAGAAGCCGGTTCCTCTGCTGCGCTTATCCCTGCAAAGCATTGCACATAGAGCACACCACGAAAACACCAAAGCTGAAGTTTGATAGGGTGGATCTGTCGACAAGAATGAAGCACATCGTCGAGCAGCTAAAACCAGTCTGTGCCAAGGTCGCCACCATCCTTAACCTGGAGTTGCTGGAATCAAACCGCAGCATTGGCCAGTGCATTGCAATGAGTCTGAATTCTGAGTTCTCTGGGAAAATGGGGCATGCAGTTGTTCTTCCAAGCAGCATTGCTATGAATCGTCCTGTGACCACTTCAGATTTCATAGAACCTAAATTTTATGGGAGGGAGGGTGAGAAAAGTACAATTATCAATGACGTTATTGAGGGTGATTACTGTGACGTGGACCTAACCGTCATTCCAATTGTTGGTCCAGGAGGGATAGGAAAGACAACTCTCACTCAGCAAATATACAAAGAAGTACAAAACCATTTTGATGTTAATATTTGGGTTTGTGTCTCTCTCAATTTCAATGTGTATAGATTGAAAGAGGAGATTGCCAAGTCGATACCAAAAGTCAATGAAGAGAACTCTGGTTGGCCGGATGATTTGATTGAGCAAAGGTTGAAATCAAAGAGATTTTTGCTTGTCCTGGATGATATATGGAATTTGGTTTATGAGGATGAGTGGAAGCAGCTATTAGCACCCCTCAAAAAAGCACAATCAAAGGGAAACATAATTGTAGTCACCACTCGTTTTCCAGCGGTTGCGGAAATGGTTAAAACAACTAATTGTTCAATACAATTGGAAGGGCTGGAACCTAAAATGTTTTGGGAATTATTCAAAGCATATGCTTTTGGCGATGAGAAAACAGTAAATGATCATGGTAACTTACAAGAGACTGGAAAAATGATAGCCAAAAAATTGAAGGGCTCCCCTTTGGCGGCAAAAACTGTAGGAAGATTGTTGAGAAAGCACCTTGATATTGATCATTGGACAGGAATCCTAGATAGTAAAGAATGGGAATTACAAACTGGTAAGAATGATATTATGCCGGCATTAAAGCTTAGCTATGACTATCTCCCTTTCCATCTACAACAATGTTTTACATATTGTGCTTTGTTCCCTGAAGATTACATCTTTGACAGTGAGCAATTGATTCACTTATGGATAGGACTAGACATTTTGCATTCACATGATCAAAATACAAGAACCGAAGACATAGGATTGAACTATTTGAATGACTTGGTTAGTTATGGATTTTTCAAAAAAGATGAACAAAATGATGGGTCTCCTTACTACGTTATGCCTGATTTGCTGCATGAGTTAGCATTGAAGGTTTCATCATATGAATGTCTTGCTATAAGTAGTTCTAATGTGAGATCTATTCAAGTTCCACCATCTATACGGCACTTGTCTATTGTGATAGATGATGTGGATGTAAATGATAGAGTGACTTTTGAAAACATCAAGAAGGATTTCAGCACACTGCATAAGCAATTGGATATTGAAAAGCTTCACTCTGTGATGCTATTTGGACAATACCATGGAAGCTTTGTCATTCCTCTTGGTAATTTGTTAAGCAAAGCAAAAGCACTCCGCGTCGTCTTGTTGTATGCACCATCTTACGTGGTGGAAAATATGTTGCACAACTTTTCAAATCTTATTCATTTGCGCTACTTAAGGATTAATAAGGGATATTTCCCAGAAATGAGTCTACCCAATACCATTTCAAGATTTTATCACTTAAGGATCCTTGATTTACAACAATGCAGGGGTCACTTTGGTTTACCAAGAGACATGAATAATCTTGTAAGGCTACGGCATTTTCTTGTCCCATACGATAATCTCCACTCCGACATTACTAGTGTGGGAAAGCTGAAATGTTTACAAGAACTAAGGAGATTTGAAGTCAAAAGACAGGTTGAGGCATTTGCATTAAGACAACTAGGGCAGTTGGAAGACCTAAAAGGATCATTGGGCATCTATAATCTTGAAAATGTGAAGGCAGCAAAGGAGGCAGAACTTTTAAACAAAAGTCGCTTACACAAGCTAATATTAGATTGGGATATTAAGCGTTCGACAAATGATCCTTCACAAGAAGAACATATCCTGGAAAATCTTAAACCACATAGCAATCTCCTGGAGCTACACATTAATGGGCATGGTGGCGCCACTTGCCCATCATGGTTGGGTGTTAACTTGTCCATGAAAGGTTTGAAATCTCTTCGTCTGAATTGTGTCGACTGGAACAATTTCCCGCCTATAGGGGAGTTGTCATTGGTTAATGAGCATGGTCATAAATCCTTGGATTGTACAACAGATCGGAGCTTTCCGAATTTAAAAAGGTTGGAGCTAGTTGCCATACCAAGATTGTCAAAATGGGCTGGAAATGATGCTTGCCATGTGTTCTCCCTGCTAGAGGTGCTCATCGTAAGAGATTGCCCTGAACTGATGGAGTTGCCATTTTCACATCCCACCACTTGCTCTCGGCCAGAACAAGGGACAAACCTGACCCAATTCCCTACACTAAAGAAGCTTGAGATTGTAAATTGTCAAAAGTTGTCATCATTGCCTCCCATTCCTTGGACAAGCTGTCCATGCCATGCTTATATTGAAGAAGTGGGATCGGATTTTCAGCAGTTGGATTACTCAACAAATAACCAATCTGAATTATGCTTGCTAGTTAAGGGAAAGGACGACAATCTAGATAGTGCATTCTGGAGGTTATTGGTGTTCAGTAATCTAACTGAGCTAAAAGAGTTGACGTTGACAAAGTGCCCTCCTTTGCCATTGGAACACCTACAGAGTCTGTCATCATTGAGGATGCTCTGTATGCAAGACTTGAGTAATGTCTTGTTGCAGGACAAAGCCGAGAACACTGTCAGATACCAATTTCCTGTTGAGAAACTTAGGATCTTTAACTGTAGTTGTAGCGGGAAGGAATTGACACTGTTGTCATCCCATTTCCCCAAGCTCTCAATGTTTGTAATAAGGGGATGTGAGAATATAAGAGGGCTTGGTGTGGCGAAGCAGGGGATGACAGCAATGTCAGCATCGTCATTGCCGTCTGCTGGTAGTAAGTTGGAGGATGAATGTCTCGGACAGGAGCAGCAAGAACCAGGAGAGGAGGATGAGAAAGCAGCCGCAGATGGAGGGCTGCTGCTCTTACCTCAGCAACTTCAGTATTTGACTATCGGGGAAATGTCAGAGCTGGCATTAGTATTTGACACGGCAGGAGGCCTCAGAGGCGTAGGAGAAGGATTACAAGGTCTGCACTCCATAAAAAATTTGAATATATGGAATTGCCCCAATTTCTTGTCCTCCTACTCGTCCTCCTCGCATCATTCCCCATTTCCGTCCTCCCTGCAAGAACTGTTTCTTAGTTATATGAGTGGGATGAATACTCTGTCACCCCTCTCTAACCTCAATTCTCTTGCTAAGTTAGCCATATGGGACTTTGGGGATTTAAGAGCTGATGGCTTGAGTTCTCTCATCGCCCATGGCCAACTCAAAGAGCTAGATGTCCGGAGGTCCCCCAACTTCTTCGTCGGATCCGACCTCTCGCTATTATTGCAACTAAAAACGGATGACATCACATGGCTCCTTGTTGCCCCTGTCTGCAACATTCTCGCTTCCTCACTCACCGAGCTAACCATTGGCTGGAACGACGAGGTGGAGCACTTCACCAAGGGGCAAAACGCGGCCCTTCTGCTCCTCTCCTCTCTCCAGGACCTCCGATTTTGGTGTTACTCGAAGCTGCGATTCCTCCCAACAGGGCTACACAGGCTCACCCGCCTCAAGAGATTAGAGATCGCCTTGTGTCCAGCCATCCGTTTGCTGCCCAAGGGCGGTCTTCCGAGATCACTAAAAGTATTAGATGTCAGTGAGAGCAAAAACGAGGAGCTCAAAAGACAGTGCCGTAAGCTAAGAGGAACCATTCCGATCATCCAAGACAGAAAGTACTAA
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| Protein seq | MESVAVNAARWVVGKALSPLSGGLVEAWAASTELGPNIGAIKTELLYAQGMLHNARGRETSNPALQQLLLELRGLAYNAEDVLDELDYFRIQDELDGTYEAAEEHAKGCLQGLVLNTRHTVRNIKKKACSCGDNGEESRHANDEEALAGSGCIHKLFSNARERSRFLCCAYPCKALHIEHTTKTPKLKFDRVDLSTRMKHIVEQLKPVCAKVATILNLELLESNRSIGQCIAMSLNSEFSGKMGHAVVLPSSIAMNRPVTTSDFIEPKFYGREGEKSTIINDVIEGDYCDVDLTVIPIVGPGGIGKTTLTQQIYKEVQNHFDVNIWVCVSLNFNVYRLKEEIAKSIPKVNEENSGWPDDLIEQRLKSKRFLLVLDDIWNLVYEDEWKQLLAPLKKAQSKGNIIVVTTRFPAVAEMVKTTNCSIQLEGLEPKMFWELFKAYAFGDEKTVNDHGNLQETGKMIAKKLKGSPLAAKTVGRLLRKHLDIDHWTGILDSKEWELQTGKNDIMPALKLSYDYLPFHLQQCFTYCALFPEDYIFDSEQLIHLWIGLDILHSHDQNTRTEDIGLNYLNDLVSYGFFKKDEQNDGSPYYVMPDLLHELALKVSSYECLAISSSNVRSIQVPPSIRHLSIVIDDVDVNDRVTFENIKKDFSTLHKQLDIEKLHSVMLFGQYHGSFVIPLGNLLSKAKALRVVLLYAPSYVVENMLHNFSNLIHLRYLRINKGYFPEMSLPNTISRFYHLRILDLQQCRGHFGLPRDMNNLVRLRHFLVPYDNLHSDITSVGKLKCLQELRRFEVKRQVEAFALRQLGQLEDLKGSLGIYNLENVKAAKEAELLNKSRLHKLILDWDIKRSTNDPSQEEHILENLKPHSNLLELHINGHGGATCPSWLGVNLSMKGLKSLRLNCVDWNNFPPIGELSLVNEHGHKSLDCTTDRSFPNLKRLELVAIPRLSKWAGNDACHVFSLLEVLIVRDCPELMELPFSHPTTCSRPEQGTNLTQFPTLKKLEIVNCQKLSSLPPIPWTSCPCHAYIEEVGSDFQQLDYSTNNQSELCLLVKGKDDNLDSAFWRLLVFSNLTELKELTLTKCPPLPLEHLQSLSSLRMLCMQDLSNVLLQDKAENTVRYQFPVEKLRIFNCSCSGKELTLLSSHFPKLSMFVIRGCENIRGLGVAKQGMTAMSASSLPSAGSKLEDECLGQEQQEPGEEDEKAAADGGLLLLPQQLQYLTIGEMSELALVFDTAGGLRGVGEGLQGLHSIKNLNIWNCPNFLSSYSSSSHHSPFPSSLQELFLSYMSGMNTLSPLSNLNSLAKLAIWDFGDLRADGLSSLIAHGQLKELDVRRSPNFFVGSDLSLLLQLKTDDITWLLVAPVCNILASSLTELTIGWNDEVEHFTKGQNAALLLLSSLQDLRFWCYSKLRFLPTGLHRLTRLKRLEIALCPAIRLLPKGGLPRSLKVLDVSESKNEELKRQCRKLRGTIPIIQDRKY |
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| Function | Putative disease resistance protein RGA1 [UniProtKB/Swiss-Prot:Q7XA42] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0707733 | OsNip_06t0707733-00 | Chr06 | 29927274 | 29931821 | - | RAP2018-11-26 | ||
| CDS seq | ATGGAGTCGGTGGCCGTGAACGCGGCGCGGTGGGTGGTCGGCAAGGCGCTGAGCCCGCTGTCCGGAGGGCTCGTGGAGGCGTGGGCCGCTAGCACGGAGCTCGGCCCCAACATCGGCGCCATCAAGACGGAGCTGCTCTACGCGCAGGGGATGCTGCACAATGCCCGCGGCAGAGAGACCAGCAACCCCGCGCTGCAGCAGCTGCTCCTGGAGCTCCGTGGCCTCGCCTACAACGCCGAGGATGTGCTGGACGAGCTCGACTACTTCCGTATCCAGGACGAGCTTGATGGCACCTATGAGGCCGCCGAAGAGCACGCCAAGGGCTGTCTCCAAGGACTCGTGCTCAACACACGCCACACAGTCAGAAACATCAAGAAGAAGGCGTGCTCATGCGGAGATAATGGGGAAGAGAGTCGCCATGCCAATGATGAGGAGGCACTTGCAGGCAGCGGCTGTATTCACAAGCTCTTTTCCAATGCTCGAGAAAGAAGCCGGTTCCTCTGCTGCGCTTATCCCTGCAAAGCATTGCACATAGAGCACACCACGAAAACACCAAAGCTGAAGTTTGATAGGGTGGATCTGTCGACAAGAATGAAGCACATCGTCGAGCAGCTAAAACCAGTCTGTGCCAAGGTCGCCACCATCCTTAACCTGGAGTTGCTGGAATCAAACCGCAGCATTGGCCAGTGCATTGCAATGAGTCTGAATTCTGAGTTCTCTGGGAAAATGGGGCATGCAGTTGTTCTTCCAAGCAGCATTGCTATGAATCGTCCTGTGACCACTTCAGATTTCATAGAACCTAAATTTTATGGGAGGGAGGGTGAGAAAAGTACAATTATCAATGACGTTATTGAGGGTGATTACTGTGACGTGGACCTAACCGTCATTCCAATTGTTGGTCCAGGAGGGATAGGAAAGACAACTCTCACTCAGCAAATATACAAAGAAGTACAAAACCATTTTGATGTTAATATTTGGGTTTGTGTCTCTCTCAATTTCAATGTGTATAGATTGAAAGAGGAGATTGCCAAGTCGATACCAAAAGTCAATGAAGAGAACTCTGGTTGGCCGGATGATTTGATTGAGCAAAGGTTGAAATCAAAGAGATTTTTGCTTGTCCTGGATGATATATGGAATTTGGTTTATGAGGATGAGTGGAAGCAGCTATTAGCACCCCTCAAAAAAGCACAATCAAAGGGAAACATAATTGTAGTCACCACTCGTTTTCCAGCGGTTGCGGAAATGGTTAAAACAACTAATTGTTCAATACAATTGGAAGGGCTGGAACCTAAAATGTTTTGGGAATTATTCAAAGCATATGCTTTTGGCGATGAGAAAACAGTAAATGATCATGGTAACTTACAAGAGACTGGAAAAATGATAGCCAAAAAATTGAAGGGCTCCCCTTTGGCGGCAAAAACTGTAGGAAGATTGTTGAGAAAGCACCTTGATATTGATCATTGGACAGGAATCCTAGATAGTAAAGAATGGGAATTACAAACTGGTAAGAATGATATTATGCCGGCATTAAAGCTTAGCTATGACTATCTCCCTTTCCATCTACAACAATGTTTTACATATTGTGCTTTGTTCCCTGAAGATTACATCTTTGACAGTGAGCAATTGATTCACTTATGGATAGGACTAGACATTTTGCATTCACATGATCAAAATACAAGAACCGAAGACATAGGATTGAACTATTTGAATGACTTGGTTAGTTATGGATTTTTCAAAAAAGATGAACAAAATGATGGGTCTCCTTACTACGTTATGCCTGATTTGCTGCATGAGTTAGCATTGAAGGTTTCATCATATGAATGTCTTGCTATAAGTAGTTCTAATGTGAGATCTATTCAAGTTCCACCATCTATACGGCACTTGTCTATTGTGATAGATGATGTGGATGTAAATGATAGAGTGACTTTTGAAAACATCAAGAAGGATTTCAGCACACTGCATAAGCAATTGGATATTGAAAAGCTTCACTCTGTGATGCTATTTGGACAATACCATGGAAGCTTTGTCATTCCTCTTGGTAATTTGTTAAGCAAAGCAAAAGCACTCCGCGTCGTCTTGTTGTATGCACCATCTTACGTGGTGGAAAATATGTTGCACAACTTTTCAAATCTTATTCATTTGCGCTACTTAAGGATTAATAAGGGATATTTCCCAGAAATGAGTCTACCCAATACCATTTCAAGATTTTATCACTTAAGGATCCTTGATTTACAACAATGCAGGGGTCACTTTGGTTTACCAAGAGACATGAATAATCTTGTAAGGCTACGGCATTTTCTTGTCCCATACGATAATCTCCACTCCGACATTACTAGTGTGGGAAAGCTGAAATGTTTACAAGAACTAAGGAGATTTGAAGTCAAAAGACAGGTTGAGGCATTTGCATTAAGACAACTAGGGCAGTTGGAAGACCTAAAAGGATCATTGGGCATCTATAATCTTGAAAATGTGAAGGCAGCAAAGGAGGCAGAACTTTTAAACAAAAGTCGCTTACACAAGCTAATATTAGATTGGGATATTAAGCGTTCGACAAATGATCCTTCACAAGAAGAACATATCCTGGAAAATCTTAAACCACATAGCAATCTCCTGGAGCTACACATTAATGGGCATGGTGGCGCCACTTGCCCATCATGGTTGGGTGTTAACTTGTCCATGAAAGGTTTGAAATCTCTTCGTCTGAATTGTGTCGACTGGAACAATTTCCCGCCTATAGGGGAGTTGTCATTGGTTAATGAGCATGGTCATAAATCCTTGGATTGTACAACAGATCGGAGCTTTCCGAATTTAAAAAGGTTGGAGCTAGTTGCCATACCAAGATTGTCAAAATGGGCTGGAAATGATGCTTGCCATGTGTTCTCCCTGCTAGAGGTGCTCATCGTAAGAGATTGCCCTGAACTGATGGAGTTGCCATTTTCACATCCCACCACTTGCTCTCGGCCAGAACAAGGGACAAACCTGACCCAATTCCCTACACTAAAGAAGCTTGAGATTGTAAATTGTCAAAAGTTGTCATCATTGCCTCCCATTCCTTGGACAAGCTGTCCATGCCATGCTTATATTGAAGAAGTGGGATCGGATTTTCAGCAGTTGGATTACTCAACAAATAACCAATCTGAATTATGCTTGCTAGTTAAGGGAAAGGACGACAATCTAGATAGTGCATTCTGGAGGTTATTGGTGTTCAGTAATCTAACTGAGCTAAAAGAGTTGACGTTGACAAAGTGCCCTCCTTTGCCATTGGAACACCTACAGAGTCTGTCATCATTGAGGATGCTCTGTATGCAAGACTTGAGTAATGTCTTGTTGCAGGACAAAGCCGAGAACACTGTCAGATACCAATTTCCTGTTGAGAAACTTAGGATCTTTAACTGTAGTTGTAGCGGGAAGGAATTGACACTGTTGTCATCCCATTTCCCCAAGCTCTCAATGTTTGTAATAAGGGGATGTGAGAATATAAGAGGGCTTGGTGTGGCGAAGCAGGGGATGACAGCAATGTCAGCATCGTCATTGCCGTCTGCTGGTAGTAAGTTGGAGGATGAATGTCTCGGACAGGAGCAGCAAGAACCAGGAGAGGAGGATGAGAAAGCAGCCGCAGATGGAGGGCTGCTGCTCTTACCTCAGCAACTTCAGTATTTGACTATCGGGGAAATGTCAGAGCTGGCATTAGTATTTGACACGGCAGGAGGCCTCAGAGGCGTAGGAGAAGGATTACAAGGTCTGCACTCCATAAAAAATTTGAATATATGGAATTGCCCCAATTTCTTGTCCTCCTACTCGTCCTCCTCGCATCATTCCCCATTTCCGTCCTCCCTGCAAGAACTGTTTCTTAGTTATATGAGTGGGATGAATACTCTGTCACCCCTCTCTAACCTCAATTCTCTTGCTAAGTTAGCCATATGGGACTTTGGGGATTTAAGAGCTGATGGCTTGAGTTCTCTCATCGCCCATGGCCAACTCAAAGAGCTAGATGTCCGGAGGTCCCCCAACTTCTTCGTCGGATCCGACCTCTCGCTATTATTGCAACTAAAAACGGATGACATCACATGGCTCCTTGTTGCCCCTGTCTGCAACATTCTCGCTTCCTCACTCACCGAGCTAACCATTGGCTGGAACGACGAGGTGGAGCACTTCACCAAGGGGCAAAACGCGGCCCTTCTGCTCCTCTCCTCTCTCCAGGACCTCCGATTTTGGTGTTACTCGAAGCTGCGATTCCTCCCAACAGGGCTACACAGGCTCACCCGCCTCAAGAGATTAGAGATCGCCTTGTGTCCAGCCATCCGTTTGCTGCCCAAGGGCGGTCTTCCGAGATCACTAAAAGTATTAGATGTCAGTGAGAGCAAAAACGAGGAGCTCAAAAGACAGTGCCGTAAGCTAAGAGGAACCATTCCGATCATCCAAGACAGAAAGTACTAA
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| Protein seq | MESVAVNAARWVVGKALSPLSGGLVEAWAASTELGPNIGAIKTELLYAQGMLHNARGRETSNPALQQLLLELRGLAYNAEDVLDELDYFRIQDELDGTYEAAEEHAKGCLQGLVLNTRHTVRNIKKKACSCGDNGEESRHANDEEALAGSGCIHKLFSNARERSRFLCCAYPCKALHIEHTTKTPKLKFDRVDLSTRMKHIVEQLKPVCAKVATILNLELLESNRSIGQCIAMSLNSEFSGKMGHAVVLPSSIAMNRPVTTSDFIEPKFYGREGEKSTIINDVIEGDYCDVDLTVIPIVGPGGIGKTTLTQQIYKEVQNHFDVNIWVCVSLNFNVYRLKEEIAKSIPKVNEENSGWPDDLIEQRLKSKRFLLVLDDIWNLVYEDEWKQLLAPLKKAQSKGNIIVVTTRFPAVAEMVKTTNCSIQLEGLEPKMFWELFKAYAFGDEKTVNDHGNLQETGKMIAKKLKGSPLAAKTVGRLLRKHLDIDHWTGILDSKEWELQTGKNDIMPALKLSYDYLPFHLQQCFTYCALFPEDYIFDSEQLIHLWIGLDILHSHDQNTRTEDIGLNYLNDLVSYGFFKKDEQNDGSPYYVMPDLLHELALKVSSYECLAISSSNVRSIQVPPSIRHLSIVIDDVDVNDRVTFENIKKDFSTLHKQLDIEKLHSVMLFGQYHGSFVIPLGNLLSKAKALRVVLLYAPSYVVENMLHNFSNLIHLRYLRINKGYFPEMSLPNTISRFYHLRILDLQQCRGHFGLPRDMNNLVRLRHFLVPYDNLHSDITSVGKLKCLQELRRFEVKRQVEAFALRQLGQLEDLKGSLGIYNLENVKAAKEAELLNKSRLHKLILDWDIKRSTNDPSQEEHILENLKPHSNLLELHINGHGGATCPSWLGVNLSMKGLKSLRLNCVDWNNFPPIGELSLVNEHGHKSLDCTTDRSFPNLKRLELVAIPRLSKWAGNDACHVFSLLEVLIVRDCPELMELPFSHPTTCSRPEQGTNLTQFPTLKKLEIVNCQKLSSLPPIPWTSCPCHAYIEEVGSDFQQLDYSTNNQSELCLLVKGKDDNLDSAFWRLLVFSNLTELKELTLTKCPPLPLEHLQSLSSLRMLCMQDLSNVLLQDKAENTVRYQFPVEKLRIFNCSCSGKELTLLSSHFPKLSMFVIRGCENIRGLGVAKQGMTAMSASSLPSAGSKLEDECLGQEQQEPGEEDEKAAADGGLLLLPQQLQYLTIGEMSELALVFDTAGGLRGVGEGLQGLHSIKNLNIWNCPNFLSSYSSSSHHSPFPSSLQELFLSYMSGMNTLSPLSNLNSLAKLAIWDFGDLRADGLSSLIAHGQLKELDVRRSPNFFVGSDLSLLLQLKTDDITWLLVAPVCNILASSLTELTIGWNDEVEHFTKGQNAALLLLSSLQDLRFWCYSKLRFLPTGLHRLTRLKRLEIALCPAIRLLPKGGLPRSLKVLDVSESKNEELKRQCRKLRGTIPIIQDRKY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.055025 | 0.112858 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0707400 | RBH | 0.086837 | 0.370352 | 2.594791 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g49390 | RBH | 0.034197 | 0.069759 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0707733 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0028570 | SBH | 0.084716 | 4.095639 | 0.822216 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0028420 | SBH | 0.131943 | 2.062640 | 0.458835 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0028540 | SBH | 0.385063 | 3.068441 | 1.279304 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0028110 | SBH | 0.0 | 0.038639 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0028610 | SBH | 0.648563 | 2.141125 | 0.771367 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0470800 | SBH | 2.747615 | 6.718786 | 2.863707 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0027970 | SBH | 0.020327 | 0.197924 | 0.188771 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0454100 | SBH | 2.514463 | 3.8350455 | 3.8373615 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0028510 | SBH | 0.0 | 0.094116 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0028580 | SBH | 0.097557 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0028150 | SBH | 0.0 | 2.933720 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0028810 | SBH | 0.057146 | 0.088962 | 0.035567 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0028440 | SBH | 0.036604 | 0.309617 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G028310 | SBH | 0.066538 | 0.405067 | 0.188567 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0028420 | SBH | 0.000000 | 2.451127 | 1.274637 |
