Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_06g0698859 | OGI:06082340 | 15/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr06:29357590-29364555 | ||||||||
| Gene Symbol | DLN175, OsDLN175, Du13 | ||||||||||
| DNA seq | CATATAAAGTCTCAAAAATTACATTTTATCAAACTGCGTTCAACACTTCTTGGGACTACAAGTGCACGTGGTGCACAGTTCAATAACAGATGTTGCCATTTGAAATTACAACAGTAGTTTCTGACGCATTACACCTCAAAAAATGCTCTATTGTTCATGACATCCCCTATGTCTGAAAAAGAATACATCACCAACCTAGACTAGACCGGAGATGCTAGAGTTGTGATTGGCAAATTACAATTACACCAGGGCAAGCTCTACAAACTTCTGTAGTCAAGAACGGTAACTTCCTCGTCCGGAGCATCAAGGTCATTGTAACTGCAGAAGAATCGTCATCATGGATGGGTTAAGTTGCCGGTTGTAAAATATAGTACAATGGCACAGTAAATCAACATACTATTTTTGCCTCTATGATAATAAAGACAGTATGGTTAAGCCCTCGAGTAGAAGTAATCATATACAAACTAAAGCAAGGTGTAAGGCTTGGTGGCAAGCCCTAGGTGGCCAAATTGTTGGTCAGAATGTGGCATAATCAAGCCAATCCAAGCAAAATAGGAGAATAGACATCATGGAATTCAATGGTATGAATGAATAATTACTAACCTTCGCAAACGGCGAGGATCTTGACGAAAAGATGGAGGCATGGTTATAATTGGCGCAGGACCACCCATCATTGGTCCAAGCACTCCTGGGTTGGCATGAGGAGGTCCGTTTGGTTCAAATGGAGGTGGCGGCCCTTGCTCTCTCAGCATATGCATGGCTATTTCTGGAGGTGCAGGAACAAATGGACCCAAAGGACTGAAAATAAAACCAGCCACGCTCATTAGCAGTCTTTTATACTATCAGAACAAAAATTGAAATCATATCTTCTCACAGCACCTACCCAGCACCAGGAATAGGCATCAAAATTGGCGGAGCGGGAAGTTCAGGAACAAAAGGAGCATTTGGACCTCGCCCACGGAAAGCATCAAACATCTGATCATCAGCGCCATCAAGACTTGGAGAACGATCACCTCTACCATATCTGCTTCCATCTCTCTCTGCCCTATCATATTCTCTACGATTGGCACGGTCATATCTCAGACGATTATCCATACCAGGTCTCTGTCTTGATTTGTCCTGCAAATCAGAAGTATAAATATTTGTCAAGGATTTCAATGAATCCATGTAACTGCAGTTTCCACCTGCACTCAATGTATTTATCCATTAATGATACTTAGAGAAGTGTCAGCTAAATTCTTCAGTAGGGTATTGACCCATCACTAAAAGCTTTAGTCAGATTCCTTCCACTGATTCTGTCCAGGCCTGATCATTCCCTCAAATAAGCCAACCCTCCTTTAACTCTCACGTCACCGGTTAGGCCACATAAGTGACTGTCTGACTGATACCGTATAGTTCATCTAATGTAGGCTTAGCACCTAAAAGGAAAAATCTGTAGAAGGAACAAAGGGGTGGAATGGTATATGGTCCATGTGTACACAAACTAGTAACCAAAAGGCACAGGCATACAAATTATTCTTAAAAGGGAGCTGGGGTTTACTGACAAATGAAAAAGAAACAACCTACAGGAAGCAGCTGGGATAAAAGCAAAAGCAAATTTTATTTGAAGTTCTTTTTTGCAGGGAACTTTTATTCGAAGTTATAATGTAACATGTGTATAGCACATATGTGATATACTGGTATGTAATTATGCATGGAATTCACTTGTAGAATTGTTCTGTTTTATTTAAGCAAGTAATAGAGTATGAGGTTCTTACTGGTGCAGACTGTTGCATAACTGGAGTTCCACCAGGTGCATTAGGATCACTGTTCATAAAGAAACATCCAGATCAGTAACACCTCCTTAAAAAAAAGTAGCACAGGCAGAAAATCATATGTACATACTTCATGTAATTTTGGAAATAGAGATCCTCTCGGACTTTGGAAGTCAACTCTAACACAAGCTCTGGATGCTTCAGCCTCAAATGCTTGTGAACGAACTCAGGAGCATGGAAAAGTTTCGTACAACCCTTAGCTCCACAGCCATATTTCCAACCATATTTTTCATCCCTTATCTTCCTGACATAAGGTTCCAGAACTTCCACAGCTGCTGCATCGATTTTGTCCTTGGCTGCTAATATTACCATGGGGTCCTGACCTCTCAGCCTTTCTTGCCAGAAAGTATCCACCTTCTTTTCCCAGTCAGCGGCATTAATATTGGTTGTATTAGACGTCTTATTGTCTGCTCTGACATGGCGACTGCCTTTTGCTTCATTTGTCTCAGACATGCCATAGTAATCAACACCATGAATACGCCATAAATAGGTAAGAAGAGTATCTAGGAGCTCAACACCTTCAAGGCCTTTGACAGTGGTTAAGCCTCGGATTATAATTATAGGCCCCATAGATCCAATATGAGACTTGTCTACATCTGATTTGTCATGATCGCCACTTGATAGGATATTCCCCACAATACCCTTCTCAGTGTCAAGCTTACGCACAAGGGCTAGAGCTTGTTCAATGTCAACTTGAACCCGTCGAGATTCAGAGCTAACTGGATGAGCCACGGGAGCACCAGAAAGAGGGTCTGTTTCTTTTGAGGAACCCCTGCCATGCTTTCTTCTCTTGTCACTGTCTCCATCATCATCAGAATTTCCATCACTGCCACTTGCTGCAGCCGCAGTTATTCCAGGGCCACTGCTCAGTAAAAAATCAAGGTATAAACAAGAAGTCCAGAAGATCATCATAACACAAGCTGTGCAGATATAACTCACAGGTCCAGAGTTCCATTTTGCAAATCATGAAAGAAATCCTTTGCTGTTGCCTTACAACTATCATTCCTCCTGCATTATATGGAAAAGTTGCAGTTAGACGAAACTACAACATTTATAACTCTAACATAACAGTAGTACTAGGGATTTAAATTGTAATATCTGCAGTTTTGTGATAACTTCGAAATCAAATATGTAGTTTTGTGATACAGCGCCTTAAATCTATACTTTTGTGATAATTTGGTCAAAGCACCTGTAGTTTTCTGAAATTTACTTAACAAAAATGTAAAAGGAGTTAAGATGAGCAGTATAAAGGGTATTGTTCTGCAAGAAAATTTTTTCCACAACATAATAATGTTTATGAATGCATAAGGGAACAGGCTCAATAAAAAGGAATTCAACTCCACCTGTCAATAACAGATGACAAGTTGGTCGGATGGTACTTGTCTTTCAACCTGCAAGTGAAAGCAAATGAAATGTCAGTTAAAGCAAGTGGACCATTTTTGTTCCTAGTTGTGTACAGCTAAATCATTTTGACTTACCGATCATCATTCTTGTTAAGGTCAAAATAAGCACGTTTTTGAGTAGTGATGTACTCTGTCCTGTATTCTTGATACCTTTTTAAACAGACATAGCCCATCAATACTAAAAAGGTAGCACAAAGATATAATCAGTAAGTGTTGTGCATTTACCGTTTCTCAGCTTCAGCAGGTGAAATATCATCCTCAAGAACTTGGATGAACTGTTTGTAAGTCATCAGTCCTTCCCTGAAAAGATGCATAATCATATAAGATAACAGAAATACACTAAGAGAAACTCATGAAACTATATCCCAATCCTCTGCTCAATATGTTAGAACGGTTAGCTCGTCAAAATGAATGGAGGGAACAATATTTGAAAACAAGTTTAAATGTGACAACAGTTCAGATTTCTTTAATCTGCAATAGAAGTTTTCATAAATCTGTTTCAACAGTTCAAAGATCAGTTTAAAAGGTATGCATGTTGAATATTTTTTTACAAATAACAAAAAAGAAGGCAATCCACCTCTCCCTACAGAGATGTCATCTAACATGTGGCCTTCATATGAACTGCCACTCATTACAATGTTTTATGCAAATCGGTCACCAGGAACAACTGCATTGGTCGGGCAAAAGATTCTCCTAATTAAAAAAAATCCTGACCAATAACTAACTAAATATTATCTTCCTTAGCAACATGGTCTACCTTCTCTAACATTTCATGTTCTTCCTAACTAAGACACCTTAAGCACACAATAACACTCAATGATAAATGTAAATGTGACATACACATAACTAGAGGAAACAACTGAATAAACATTTGCTAATTACATGCGTTGCCACCAAAAGTATTATCAGCATAGAATAATTGTTATTTCTTAAAAACTTGAAGAAGTCATTACAACCATGTGATGGTTGATGGGGTATACCAATAACTTCTGCCCATCCATCAGCTGATTCCAATTACTATCTTTCCGCTATTGTTTTTGTCCAAGAAAATTCTAGAATTCCTTCAGATGACAACTACGGGAAGCAAAGATAAGGAGAACGAATCTAATTTCTCAATGCCAGCAACCAAATCCAAGAAAAGACCCTCAGGTTTATTAATAGCATCACTAAAATAAAAGGCTACAATTCAACAGAATACAAAATTGATTAGCAAGCCCAGTATTATAGAGAATTAACACTAAAAACACTAAATTATAATTTTCTAATGAAAAGCCCAAGCATCAACTACTCCTAACAAGCGTGATCATGCTTCAATGATTTCATGTTACATAGGAAGCAATTCATCCATTTCGTTCCTCTGAACAAGTATCATAAATTGATGAACATATTTCAGCAACTAAATAGTGGCAAAAGAAGATATACAAGAGAAGAAAACAAGAATCCCTCACCTTTTTCCTGTTAACAATGTTAACACAATCTAACAGTCTACCATCAATAGGACAAAAATGCATAGTGTTAACATGATAACATCTACTTATGCAAATTAGCATTGGAAGTGTTGTGTTCCATGGAGTTATCAATGTATATTTAAGATAACATGGTATAGAATTAAAAAAAAGAAAGAAAAAGAAATCCACTACTAGAGATTCAAATAAAGCCTCTGAGCCTTTGTTTGTTGTTAACAGATAAAGAATATTCCCATCAGATTCTCCATTTGATTGTATCCAAAAGCATATGCTTCTTATGCCTTCAAGGTGTAGCTGAATATCTGGGTGGTATAGCTTACATATAACTGGGAAGAGTCCTTTTGTGGTGGCACTAACTGTAAATTGAGCTGGCTTGCTGGTGGCTAATAACAGTAACAAGGTTCCGGAGTATGTAGTGCTGCAGTAAAGGATTTCAAGCTGATAGCTTAACTACAGGCTCACAGTTCTCAAAGAATCAGTCAGATTTCAAACATCAAATTTGGAGAATTTTCTGAGAAGATTCTCTATCTGTTAACGATGCCTTACAGCATCTAGCATAGAAGGCTTAATTTGCATTTCCCAATAGTAGTGGCAATTAGCTCCAGTATTGTCGATCGCTACATAGTTACAGTACCCAGGAGACAACATCAAAGTGCCTAACAATCAGAAAGAGTAAACATGGTAAAGGAATAAGTACCTTTGGGTAATTCCAGGACCATCATTGGATGCCCCAAACCCTGAATCGGCCCAATCTGACATTGAAATCGAATTGTCAGAACATATTCACAAGTATCAAGAATCTATGTTCTAAATGAGGAGTGTAAGTGCTAGCTAAAGTAAAAAAAAACAGCCATGCATATACTTTGTCTTCATCCCGACTAGAATGATTCGAAGCAGGAACAAATTAGAAGATAGTGGTAAAATTCTTACTACAACTATAACACACCAAACAAATCAAAGAGCTAATAGCCCTAACACCCAACATCTACAGATCTGAAATCCTGAACCTCCCTGCCATAAATATTTAACATTTAGGACAAGATTTGGTCAAAATTTAAAATTACAACCATCAATTTTGTAGTAGAAATAAGTTTATAAAATCTAATAACTTTTTATATTATGATAGTACTTTTCAAGGAAAATCTATATACAACATTTTATTTTGTTTTAAAACTAAGCATTTGGGAAATTACAGTCGGAATTTTGAAAATTCAACCGAATTTTGTTCTAAACGTCAAATATTTATGACCGCAGGGAGTACATTAGCAAGTGCTAACAAAGCAAGGTTGCTAATGTTTACCAAGTAGAACAGCCCCATGCTGTTCACTTGAATTCAGTAAACTCATACTGACTATGGAGCAAAGGATCTGATAGTTTTCACTAAACTATGTTGTAGATCATCAAAACCAATCTAATTTGGTGGGGAACTAACTACAGGCAAATAATCAATTTCCCTCATACCATTTGGGGTTCGCTCATGCTGTGCTACTCAAACAGCTTACTTCTGAGATCGAAACGAAACTTTGCCCGAGGAGAAGAATCCTCACCTGCTGCGCGATTTTGATACCTGCCATGGTATCGGTCATCATCATACCCACCTCTGCCTCCACCACGCTCGTGGTCATATCCATACCTACCCAACACATCACCCAAGCACACGCGATGAAACCGCAGAGCCTCGAAGAACTAACCACCAATCCAGTACAGATTTCGACCAAATGACCAAGAAGAAACCCCTCACCTCCTGTCGCCGTACCCGTACCGCGGCGGCGGGCTCCCACGGCCGCCACGGCGGTCGTACCCGTCGTCCCGCCGCGACCTCTTGAACGGCGGCGAAGGGGATCTCCTCGACGGGGAGTGGCGGCGGCCACTCCGATACGGCGGGGGGCTGGAACTACCCCCACCCCGGCCACCGCCTCCTCCCCGGTGGTGGTTGTCGCGGTAGCGCTCGGGGCGCGACGAGCCGAGCGGCGGGGGCGGCGGGAGGGAGGGCGGCGGGGGAGGCGGCGGTGGCGAGCGGCTCCGCTTGCGGGTGGCCGCCGGCTGCGGCGGGCCACCGGGGGGCGGGGGCGGGAGCGGCGGCGAGCGGCCCTCCGGGCTGTCGGGCGGAGGCGGCGGCGGGCGGCGCGCGCGGGGGGCCTCGGTGGAGGCGGGGTCGATGACGTCAGCCATGGGGGGGAGCGTCGCGGTGGGGTTAGGGTTTGGGAGTGAGGAAGCGAATCGCGCACAGCTTGAGGAGGGGGGAGAGAGAGAGGGTAGGCTAGGCTGCGGGCTGCGGCGCAC
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| CDS seq | ATGGCTGACGTCATCGACCCCGCCTCCACCGAGGCCCCCCGCGCGCGCCGCCCGCCGCCGCCTCCGCCCGACAGCCCGGAGGGCCGCTCGCCGCCGCTCCCGCCCCCGCCCCCCGGTGGCCCGCCGCAGCCGGCGGCCACCCGCAAGCGGAGCCGCTCGCCACCGCCGCCTCCCCCGCCGCCCTCCCTCCCGCCGCCCCCGCCGCTCGGCTCGTCGCGCCCCGAGCGCTACCGCGACAACCACCACCGGGGAGGAGGCGGTGGCCGGGGTGGGGGTAGTTCCAGCCCCCCGCCGTATCGGAGTGGCCGCCGCCACTCCCCGTCGAGGAGATCCCCTTCGCCGCCGTTCAAGAGGTCGCGGCGGGACGACGGGTACGACCGCCGTGGCGGCCGTGGGAGCCCGCCGCCGCGGTACGGGTACGGCGACAGGAGGTATGGATATGACCACGAGCGTGGTGGAGGCAGAGGTGGGTATGATGATGACCGATACCATGGCAGGTATCAAAATCGCGCAGCAGATTGGGCCGATTCAGGGTTTGGGGCATCCAATGATGGTCCTGGAATTACCCAAAGGGAAGGACTGATGACTTACAAACAGTTCATCCAAGTTCTTGAGGATGATATTTCACCTGCTGAAGCTGAGAAACGGTATCAAGAATACAGGACAGAGTACATCACTACTCAAAAACGTGCTTATTTTGACCTTAACAAGAATGATGATCGGTTGAAAGACAAGTACCATCCGACCAACTTGTCATCTGTTATTGACAGGAGGAATGATAGTTGTAAGGCAACAGCAAAGGATTTCTTTCATGATTTGCAAAATGGAACTCTGGACCTTGGCCCTGGAATAACTGCGGCTGCAGCAAGTGGCAGTGATGGAAATTCTGATGATGATGGAGACAGTGACAAGAGAAGAAAGCATGGCAGGGGTTCCTCAAAAGAAACAGACCCTCTTTCTGGTGCTCCCGTGGCTCATCCAGTTAGCTCTGAATCTCGACGGGTTCAAGTTGACATTGAACAAGCTCTAGCCCTTGTGCGTAAGCTTGACACTGAGAAGGGTATTGTGGGGAATATCCTATCAAGTGGCGATCATGACAAATCAGATGTAGACAAGTCTCATATTGGATCTATGGGGCCTATAATTATAATCCGAGGCTTAACCACTGTCAAAGGCCTTGAAGGTGTTGAGCTCCTAGATACTCTTCTTACCTATTTATGGCGTATTCATGGTGTTGATTACTATGGCATGTCTGAGACAAATGAAGCAAAAGGCAGTCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTGGGAAAAGAAGGTGGATACTTTCTGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAATATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAGGAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAAACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGTGTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCCTAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAGACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTAGAGAATATGATAGGGCAGAGAGAGATGGAAGCAGATATGGTAGAGGTGATCGTTCTCCAAGTCTTGATGGCGCTGATGATCAGATGTTTGATGCTTTCCGTGGGCGAGGTCCAAATGCTCCTTTTGTTCCTGAACTTCCCGCTCCGCCAATTTTGATGCCTATTCCTGGTGCTGGTCCTTTGGGTCCATTTGTTCCTGCACCTCCAGAAATAGCCATGCATATGCTGAGAGAGCAAGGGCCGCCACCTCCATTTGAACCAAACGGACCTCCTCATGCCAACCCAGGAGTGCTTGGACCAATGATGGGTGGTCCTGCGCCAATTATAACCATGCCTCCATCTTTTCGTCAAGATCCTCGCCGTTTGCGAAGTTACAATGACCTTGATGCTCCGGACGAGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAG
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| Protein seq | MADVIDPASTEAPRARRPPPPPPDSPEGRSPPLPPPPPGGPPQPAATRKRSRSPPPPPPPPSLPPPPPLGSSRPERYRDNHHRGGGGGRGGGSSSPPPYRSGRRHSPSRRSPSPPFKRSRRDDGYDRRGGRGSPPPRYGYGDRRYGYDHERGGGRGGYDDDRYHGRYQNRAADWADSGFGASNDGPGITQREGLMTYKQFIQVLEDDISPAEAEKRYQEYRTEYITTQKRAYFDLNKNDDRLKDKYHPTNLSSVIDRRNDSCKATAKDFFHDLQNGTLDLGPGITAAAASGSDGNSDDDGDSDKRRKHGRGSSKETDPLSGAPVAHPVSSESRRVQVDIEQALALVRKLDTEKGIVGNILSSGDHDKSDVDKSHIGSMGPIIIIRGLTTVKGLEGVELLDTLLTYLWRIHGVDYYGMSETNEAKGSRHVRADNKTSNTTNINAADWEKKVDTFWQERLRGQDPMVILAAKDKIDAAAVEVLEPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLRLKHPELVLELTSKVREDLYFQNYMNDPNAPGGTPVMQQSAPDKSRQRPGMDNRLRYDRANRREYDRAERDGSRYGRGDRSPSLDGADDQMFDAFRGRGPNAPFVPELPAPPILMPIPGAGPLGPFVPAPPEIAMHMLREQGPPPPFEPNGPPHANPGVLGPMMGGPAPIITMPPSFRQDPRRLRSYNDLDAPDEEVTVLDYRSL |
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| Function | Serrate RNA effector molecule [UniProtKB/Swiss-Prot:Q9ZVD0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0698859 | OsNip_06t0698859-01 | Chr06 | 29357590 | 29364555 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCTGACGTCATCGACCCCGCCTCCACCGAGGCCCCCCGCGCGCGCCGCCCGCCGCCGCCTCCGCCCGACAGCCCGGAGGGCCGCTCGCCGCCGCTCCCGCCCCCGCCCCCCGGTGGCCCGCCGCAGCCGGCGGCCACCCGCAAGCGGAGCCGCTCGCCACCGCCGCCTCCCCCGCCGCCCTCCCTCCCGCCGCCCCCGCCGCTCGGCTCGTCGCGCCCCGAGCGCTACCGCGACAACCACCACCGGGGAGGAGGCGGTGGCCGGGGTGGGGGTAGTTCCAGCCCCCCGCCGTATCGGAGTGGCCGCCGCCACTCCCCGTCGAGGAGATCCCCTTCGCCGCCGTTCAAGAGGTCGCGGCGGGACGACGGGTACGACCGCCGTGGCGGCCGTGGGAGCCCGCCGCCGCGGTACGGGTACGGCGACAGGAGGTATGGATATGACCACGAGCGTGGTGGAGGCAGAGGTGGGTATGATGATGACCGATACCATGGCAGGTATCAAAATCGCGCAGCAGATTGGGCCGATTCAGGGTTTGGGGCATCCAATGATGGTCCTGGAATTACCCAAAGGGAAGGACTGATGACTTACAAACAGTTCATCCAAGTTCTTGAGGATGATATTTCACCTGCTGAAGCTGAGAAACGGTATCAAGAATACAGGACAGAGTACATCACTACTCAAAAACGTGCTTATTTTGACCTTAACAAGAATGATGATCGGTTGAAAGACAAGTACCATCCGACCAACTTGTCATCTGTTATTGACAGGAGGAATGATAGTTGTAAGGCAACAGCAAAGGATTTCTTTCATGATTTGCAAAATGGAACTCTGGACCTTGGCCCTGGAATAACTGCGGCTGCAGCAAGTGGCAGTGATGGAAATTCTGATGATGATGGAGACAGTGACAAGAGAAGAAAGCATGGCAGGGGTTCCTCAAAAGAAACAGACCCTCTTTCTGGTGCTCCCGTGGCTCATCCAGTTAGCTCTGAATCTCGACGGGTTCAAGTTGACATTGAACAAGCTCTAGCCCTTGTGCGTAAGCTTGACACTGAGAAGGGTATTGTGGGGAATATCCTATCAAGTGGCGATCATGACAAATCAGATGTAGACAAGTCTCATATTGGATCTATGGGGCCTATAATTATAATCCGAGGCTTAACCACTGTCAAAGGCCTTGAAGGTGTTGAGCTCCTAGATACTCTTCTTACCTATTTATGGCGTATTCATGGTGTTGATTACTATGGCATGTCTGAGACAAATGAAGCAAAAGGCAGTCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTGGGAAAAGAAGGTGGATACTTTCTGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAATATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAGGAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAAACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGTGTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCCTAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAGACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTAGAGAATATGATAGGGCAGAGAGAGATGGAAGCAGATATGGTAGAGGTGATCGTTCTCCAAGTCTTGATGGCGCTGATGATCAGATGTTTGATGCTTTCCGTGGGCGAGGTCCAAATGCTCCTTTTGTTCCTGAACTTCCCGCTCCGCCAATTTTGATGCCTATTCCTGGTGCTGGTCCTTTGGGTCCATTTGTTCCTGCACCTCCAGAAATAGCCATGCATATGCTGAGAGAGCAAGGGCCGCCACCTCCATTTGAACCAAACGGACCTCCTCATGCCAACCCAGGAGTGCTTGGACCAATGATGGGTGGTCCTGCGCCAATTATAACCATGCCTCCATCTTTTCGTCAAGATCCTCGCCGTTTGCGAAGTTACAATGACCTTGATGCTCCGGACGAGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAG
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| Protein seq | MADVIDPASTEAPRARRPPPPPPDSPEGRSPPLPPPPPGGPPQPAATRKRSRSPPPPPPPPSLPPPPPLGSSRPERYRDNHHRGGGGGRGGGSSSPPPYRSGRRHSPSRRSPSPPFKRSRRDDGYDRRGGRGSPPPRYGYGDRRYGYDHERGGGRGGYDDDRYHGRYQNRAADWADSGFGASNDGPGITQREGLMTYKQFIQVLEDDISPAEAEKRYQEYRTEYITTQKRAYFDLNKNDDRLKDKYHPTNLSSVIDRRNDSCKATAKDFFHDLQNGTLDLGPGITAAAASGSDGNSDDDGDSDKRRKHGRGSSKETDPLSGAPVAHPVSSESRRVQVDIEQALALVRKLDTEKGIVGNILSSGDHDKSDVDKSHIGSMGPIIIIRGLTTVKGLEGVELLDTLLTYLWRIHGVDYYGMSETNEAKGSRHVRADNKTSNTTNINAADWEKKVDTFWQERLRGQDPMVILAAKDKIDAAAVEVLEPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLRLKHPELVLELTSKVREDLYFQNYMNDPNAPGGTPVMQQSAPDKSRQRPGMDNRLRYDRANRREYDRAERDGSRYGRGDRSPSLDGADDQMFDAFRGRGPNAPFVPELPAPPILMPIPGAGPLGPFVPAPPEIAMHMLREQGPPPPFEPNGPPHANPGVLGPMMGGPAPIITMPPSFRQDPRRLRSYNDLDAPDEEVTVLDYRSL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.430704 | 3.467967 | 4.959918 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0149600 | RBH | 0.000000 | 0.100593 | 0.956584 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g48530 | RBH | 2.250899 | 2.353098 | 1.251566 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0698859 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0027870 | RBH | 0.865969 | 6.784420 | 7.764833 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0027690 | RBH | 0.650865 | 2.162211 | 2.752823 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0027820 | RBH | 1.528868 | 7.600095 | 10.518358 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0027410 | RBH | 0.294891 | 0.464753 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0027890 | RBH | 12.736323 | 12.347253 | 21.164974 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0461500 | SBH | 3.5206125 | 7.8294665 | 11.103255 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0027280 | RBH | 0.536927 | 0.637248 | 2.241537 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0445100 | RBH | 4.3876695 | 21.6064635 | 7.5086175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0027790 | RBH | 0.288354 | 0.311568 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0027860 | RBH | 1.295366 | 14.949087 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0027450 | RBH | 9.516879 | 15.778425 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0028090 | RBH | 0.869053 | 1.162520 | 1.409551 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0027730 | RBH | 0.401020 | 7.362138 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G027620 | RBH | 0.624851 | 5.091879 | 1.553994 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0027700 | RBH | 1.920692 | 19.345720 | 7.422769 |
