Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_06g0498150 | OGI:06037390 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr06:17470732-17471497 | ||||||||
| Gene Symbol | OsEnS-86, EnS-86, MEG3 | ||||||||||
| DNA seq | TATATGTATATATTATCCAAATTAACCATTTGCTAAGCATTATGCTTGACTCAAATGTATAGACAATAAAGCCACTGATGATATGACGAGATAGCAAGATTGGTATTCCCTCCGTCCCAAAATAAACCAACCTGGTACTAGGATGTGTCACATGCTTAGTAGGTTGGTTTATTTTGGAATGAAGGGAGTAGGTATTAATAAAATTATAATACATAACTTTCATAGAAGAAACTAAAAATACTTACAATAACTACTGGAATTCAAATATCCATTTCCACATATGGTTATAATTACTATTAAGCAAGCCATGCATGCTTATTCCATTTATTGCTAGTTTCATAGGATCCATACATCTTCACTGCATATATACCTTCAATTATCATACTCGTTTTTCACCATTGCTACCATGCTTTTTGGAATCCTTTTTATCATCACCATTCTTTTGACCACTACTTTCACCCTTCTCAGAGTCCTCTTCATCGCTTAGCTCCTTAGAGCACTGATGCTTGGCCTGATTGTGAATATTGTGTGATTCCTCCATCACTGTCATCTTCTGTGGTTCCTCCCTAAGTGGTTGTCTTCCCGTTGTGTTTTCTCCACGGGACACTATAGTCTCCTCCTTGAAGTCTACAACAGCGAAGTCCTCCGGAATTAGAGATGGAACTCTATGGTGCTTGGCCCTTGCTGGTCTATGGCCCCAATGGGACATCTTCGCTACAATTCTAATAATTGTGAATTATTTGCTGTATAATTGAATTGTGTTCTT
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| CDS seq | ATGTCCCATTGGGGCCATAGACCAGCAAGGGCCAAGCACCATAGAGTTCCATCTCTAATTCCGGAGGACTTCGCTGTTGTAGACTTCAAGGAGGAGACTATAGTGTCCCGTGGAGAAAACACAACGGGAAGACAACCACTTAGGGAGGAACCACAGAAGATGACAGTGATGGAGGAATCACACAATATTCACAATCAGGCCAAGCATCAGTGCTCTAAGGAGCTAAGCGATGAAGAGGACTCTGAGAAGGGTGAAAGTAGTGGTCAAAAGAATGGTGATGATAAAAAGGATTCCAAAAAGCATGGTAGCAATGGTGAAAAACGAGTATGA |
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| Protein seq | MSHWGHRPARAKHHRVPSLIPEDFAVVDFKEETIVSRGENTTGRQPLREEPQKMTVMEESHNIHNQAKHQCSKELSDEEDSEKGESSGQKNGDDKKDSKKHGSNGEKRV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0498150 | OsNip_06t0498150-01 | Chr06 | 17470732 | 17471497 | - | RAP2018-11-26 | ||
| CDS seq | ATGTCCCATTGGGGCCATAGACCAGCAAGGGCCAAGCACCATAGAGTTCCATCTCTAATTCCGGAGGACTTCGCTGTTGTAGACTTCAAGGAGGAGACTATAGTGTCCCGTGGAGAAAACACAACGGGAAGACAACCACTTAGGGAGGAACCACAGAAGATGACAGTGATGGAGGAATCACACAATATTCACAATCAGGCCAAGCATCAGTGCTCTAAGGAGCTAAGCGATGAAGAGGACTCTGAGAAGGGTGAAAGTAGTGGTCAAAAGAATGGTGATGATAAAAAGGATTCCAAAAAGCATGGTAGCAATGGTGAAAAACGAGTATGA
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| Protein seq | MSHWGHRPARAKHHRVPSLIPEDFAVVDFKEETIVSRGENTTGRQPLREEPQKMTVMEESHNIHNQAKHQCSKELSDEEDSEKGESSGQKNGDDKKDSKKHGSNGEKRV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g30280 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0498150 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0014090 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0013900 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0014040 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0013980 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0014070 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0216600 | RBH | 0 | 0 | 0.7690705 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0013570 | RBH | 0.064850 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0211500 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0014130 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0014020 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0013760 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0014350 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0013870 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G013740 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0014050 | RBH | 0.0 | 0.0 | 0.0 |
