Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_06g0255300 | OGI:06022380 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr06:8063404-8067361 | ||||||||
| Gene Symbol | OsSYD, CHR720 | ||||||||||
| DNA seq | GATAGTCATTTGCCCGCTGCTTTACAATCAACTGAGTCAAGCCAGCCCACAGAACATGCTGCCCCCACACAAGATGATGGCAATGGTCTGCAATGTGAAGGTACTACTGTTGATGTGTCTGGTTCTAAGGAAGATATTATGGAAGTTGAGGAGAAGCTGATTGATGATATTTCCGGAAGCCCTTCTAGTCATTTGCCTGTTGCTTTAAAATCAACTGAGTCAAATCAGCCTGCAGAACATGCTGTCCCCGCAGAAGATGATGGCGATGGTCTGCAAAGCGAAGGTACCGCTGTTGATGTGGTTGATTCCAAGAAAGATGATATGGAAGTTGAAGAAAAGCAGATTGATATCTCTAGAGGCTCATCTAGCTTTCTGCCTGGCGCTTTAGAATCAGCTGAATTAAATCAACCTGCAGAACATACTGCCCCCACAGAAGATCATGGCAATTGTCTCCAAAGTGAAGGTACTGCTGTTGATGTGCCTTGTTCCAAGGAAGATAATATGGAAGTTGAAGACCAGTTTGACGGTATTTCTAGAGGCCCATCTAGCTTTTCTCCTGACACTCTAGAATCAGCTGAGTTAAATCAAGCTGCAGAACATGCTGCCCCCACAGAAGATGATGGCAATGGTCCGCAAAGTGAAGGCACTTCTGTTGATGTGGCTGGTTCTAAGGAGGACAATATAGAAGTCGAAGAGAAGATTGATGATATCTCTAGAGGCTCGTCTAGTCATTTGCCTGATGTTTTACAGTCGACTCCAAATCAGCGTGCAGAGCAAGAGTGTTTAGATAATAGTGATGACGTGAACACATCTGTTGTTTCCTCCCATGCCCCATTAAGTGGCCCCAAATTTACATGTGTGAAAGAACTTGAAAAGGCAGATGAAACCTTGGAAACGAGTGATGCCCAAGTAGCAGATGAAGTCTGTTTACAGACAAATGATGGTGCTCACAATATGGCTTCAGGAAGTTGTTCCACTTTAGAAGACAAAAACGAGGACAGTTCTGCCCAAATAGCTGATTGTGAAGATTTATTGCTAAGGAAAGGAACTACTGTTGATGACCTTGATGGCTGTGTCGAAGGTCACAGTGGCTTGTCCACCCATTCCAATGATGAAGTGCGCAACCTGGTAGAAATTGTCAAGGGTATGAATGATACTACTGCTGGCAGTGAAGTGCATGTGGATCCTGAAAGTCATGTATCTGATGAAGTGTCAATGCCAGTTGCACCATCAGAGCTCAAGGTAGAATTGAAGAACCAATCAGAACCTGCCTGTCAGTTTGGGGCAGTGATCGTCGAGGAATCAAATGTCAGCTTGGGCATTCAGACTCCTGCATTAGCTGAATCAGAAGAAATGACATCAGGAGGTTTCATGCACGGTATGCTCTTTTCTTTCAAAGTAGCACGGATGACTGTTATTCTTGATCCTTCAAATGTGTATCTTCCATGTTCTGCTAGAGTTCGAAGAACTGGAGGAGTGTATTCTTTTGTTTTTCCCTTTGGTTAGTACTGGCAGCTACTCAAGTGCAATTTTGCCTTTTCAGGTAAAGAAGTTTGTGCTTCAGAACAAACGAATATAGGTGCGGCTGCAGAACCTGCATCTACAAAAGGTTTGCTGGTTTAAAATTATGCACTATTGCAACCATTCCCTCTTAGATACTACCTCCGTCCCATATAAATTGCAATTCTAGCTAATTTAGGACATATTAGTAGGATTGAAAAATGACCACAATGACCTTATTTAATGAATCCAATAAATACACACATTCCATATATAAAATTGAGTAAAAGGAAATTTGAGACATCAAGTTAGAGATGTGATGGAAGGAATGGAGATTACGAGGAAATATGTTTTGATGTAATCAATTTGTTGGGTCCCACATTAGTAGAAATACAATTTTTATGGGACAATGGTTCAAAGGTAGAAATTCAATTTTTATGGGACGGAGGTAGTATATATTTTTTGTTCTGAACTTCTAAACTCTGACAAATATGCACACAAAAAAGTGGATGGCACATTGGCATTACACAAGTAGATTTGTCATCAAAAGTACTTCTAGACTACTAATATGTTTTTTACTTTTCCATACATATAATCTATACTACTTTAAAAGGTAGTAGTGGTGATGGCAGTAAATCTGTCTCCACTACCTCTATCACTAACGTATGGGCCCTATGTGTTGATGAAACTCCAATGCTCAATAAATTTAAACGATCCCCAAAATAACAATGTCTACACAAAATAATGTCCATATTATTTGGTAAGATCTTTACAATTATGTAGTGAAGGAATCAATATAGTTGAAGGGGTCAGAAAGAGCAGGTCTACATATTCTTTAAATGATGAGCGTGCAGTGCACATAGCATGATTTTTTTTTCAACGCATAGGCAATTTGCTAGTTAGAAAATAAATTGCAGATGGGTGTACGGGAGGCATTGTCTGAAAAGGCAATTAAAGGGGTACAGAGGTGGTAATTAATATATATGATCATGTTTACAATACTAAGTGTAGTTATTCATTAGTTTATCAATTTTCTATACAGATGATCATGATATGCATGAAGTTGATAAAGAGATTGTTCATTGTACAATATCTTCCCCCATAGGGGATCAGGAAAATCTGCAAGGTAACATTGATGGCAAGATGGACGTTGGCCTGGCGGCTTGCCAGACAGAGTCAGATTTTGTGAGTGGAAATGACCATTCTAGGGAGACTGATTTAGCAGGCAGCCAGGCACCTTATGATGCCTCGGATAAGGAAGATACTGCTGCTGATTTGATTGGTCCTAAGCAAGCCACTCTCGAGATCGAAAAAATGCAGATTGATGGTATTCCTGAAGGTCCTTCTAGCGTGCCTGCTGTTTTGCAGTTAACTGACTCAAATCAGCCAGCAGAACAAGAGAGATTAGAGAATAGTGACTCTAAATTTGCATCAACAAAGGACCAGGGCAGAGTGGATGGAACTTCCAATTTGAGTGGAGGTGATAATGCAAAGTGTAGTCTTACCAATGATGATTCTCAAACTGTGAATCTAGTAGGATATTCACCATCAGAAGACTCGAATGATGATGATTCTGTCCAAGCAGCTGATAGTGATGGCGTTCTGGGAAATAAAGAAGGTACTGATGATGTTATCTCTGCTGCATGTACCGATGATGTATCCATGCTGAAGACTGAATCAATAGATCGTCATGGTTCTGACGAAGTTGATCATTCCACTGCCCCGTCTGCTGCCATCAAACAAGAGAGTGGTACTGAAGTTACGTGTGACGCTTCTGTTCCTGTTTCTGAAAGCTCTATATCAAAGGAAATCGGTACATCGCCTGAGTGTGATGATGATCAAGTGGCTACAGCAGCACCTCATCCACCAACGCCATTATCTGATGCTACTGATGTATCTGCTGATGTGCAAATCCCAGCAGGAATATCGGAGGCAAAGCTAGAGCAGCCGAACGAAACGACTAGCCCGTCGGGTGCTGCTACTGAAGAAAATAATACTGTCGTGAGCACTCAGATTCCAACATTAGCTGAATCAGAAGATAGAACACCCGCCGATACTGCTATTCAAGGTACTCCATACAATGTTCTTCTCTATCCAGATTAGTGTATGCTCTTTGCTGTTATTTTCTGTACGGTGGCTCACATTACTCCCGCACATTATGTGTTCCCTTAGGTACTGAGGTTGACAGCGCTGAGCCAGCATCTGTAAGTGATGACGAAAACAAGGTTACAGCAGCTGATGATAGTGCACTCCCGTCTACTGGGCCAGAGGATACAGCGGACGATAAAATTGATAGCAGCGCTGATGCTAGTGAGAAGTAGGTTATGACAGACTGAGTATGTAAATGATCTCTCTCAAACCTAGTTGTAAATGTTACTGCTGAACTGATACAGCCCAACTACTATAGTGCCTTAGTTATAATTATTATTGCATCTTTTGCTAATATTATGTTAATTCC
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| CDS seq | GATAGTCATTTGCCCGCTGCTTTACAATCAACTGAGTCAAGCCAGCCCACAGAACATGCTGCCCCCACACAAGATGATGGCAATGGTCTGCAATGTGAAGGTACTACTGTTGATGTGTCTGGTTCTAAGGAAGATATTATGGAAGTTGAGGAGAAGCTGATTGATGATATTTCCGGAAGCCCTTCTAGTCATTTGCCTGTTGCTTTAAAATCAACTGAGTCAAATCAGCCTGCAGAACATGCTGTCCCCGCAGAAGATGATGGCGATGGTCTGCAAAGCGAAGGTACCGCTGTTGATGTGGTTGATTCCAAGAAAGATGATATGGAAGTTGAAGAAAAGCAGATTGATATCTCTAGAGGCTCATCTAGCTTTCTGCCTGGCGCTTTAGAATCAGCTGAATTAAATCAACCTGCAGAACATACTGCCCCCACAGAAGATCATGGCAATTGTCTCCAAAGTGAAGGTACTGCTGTTGATGTGCCTTGTTCCAAGGAAGATAATATGGAAGTTGAAGACCAGTTTGACGGTATTTCTAGAGGCCCATCTAGCTTTTCTCCTGACACTCTAGAATCAGCTGAGTTAAATCAAGCTGCAGAACATGCTGCCCCCACAGAAGATGATGGCAATGGTCCGCAAAGTGAAGGCACTTCTGTTGATGTGGCTGGTTCTAAGGAGGACAATATAGAAGTCGAAGAGAAGATTGATGATATCTCTAGAGGCTCGTCTAGTCATTTGCCTGATGTTTTACAGTCGACTCCAAATCAGCGTGCAGAGCAAGAGTGTTTAGATAATAGTGATGACGTGAACACATCTGTTGTTTCCTCCCATGCCCCATTAAGTGGCCCCAAATTTACATGTGTGAAAGAACTTGAAAAGGCAGATGAAACCTTGGAAACGAGTGATGCCCAAGTAGCAGATGAAGTCTGTTTACAGACAAATGATGGTGCTCACAATATGGCTTCAGGAAGTTGTTCCACTTTAGAAGACAAAAACGAGGACAGTTCTGCCCAAATAGCTGATTGTGAAGATTTATTGCTAAGGAAAGGAACTACTGTTGATGACCTTGATGGCTGTGTCGAAGGTCACAGTGGCTTGTCCACCCATTCCAATGATGAAGTGCGCAACCTGGTAGAAATTGTCAAGGGTATGAATGATACTACTGCTGGCAGTGAAGTGCATGTGGATCCTGAAAGTCATGTATCTGATGAAGTGTCAATGCCAGTTGCACCATCAGAGCTCAAGGTAGAATTGAAGAACCAATCAGAACCTGCCTGTCAGTTTGGGGCAGTGATCGTCGAGGAATCAAATGTCAGCTTGGGCATTCAGACTCCTGCATTAGCTGAATCAGAAGAAATGACATCAGGAGGTTTCATGCACGGTAAAGAAGTTTGTGCTTCAGAACAAACGAATATAGGTGCGGCTGCAGAACCTGCATCTACAAAAGATGATCATGATATGCATGAAGTTGATAAAGAGATTGTTCATTGTACAATATCTTCCCCCATAGGGGATCAGGAAAATCTGCAAGGTAACATTGATGGCAAGATGGACGTTGGCCTGGCGGCTTGCCAGACAGAGTCAGATTTTGTGAGTGGAAATGACCATTCTAGGGAGACTGATTTAGCAGGCAGCCAGGCACCTTATGATGCCTCGGATAAGGAAGATACTGCTGCTGATTTGATTGGTCCTAAGCAAGCCACTCTCGAGATCGAAAAAATGCAGATTGATGGTATTCCTGAAGGTCCTTCTAGCGTGCCTGCTGTTTTGCAGTTAACTGACTCAAATCAGCCAGCAGAACAAGAGAGATTAGAGAATAGTGACTCTAAATTTGCATCAACAAAGGACCAGGGCAGAGTGGATGGAACTTCCAATTTGAGTGGAGGTGATAATGCAAAGTGTAGTCTTACCAATGATGATTCTCAAACTGTGAATCTAGTAGGATATTCACCATCAGAAGACTCGAATGATGATGATTCTGTCCAAGCAGCTGATAGTGATGGCGTTCTGGGAAATAAAGAAGGTACTGATGATGTTATCTCTGCTGCATGTACCGATGATGTATCCATGCTGAAGACTGAATCAATAGATCGTCATGGTTCTGACGAAGTTGATCATTCCACTGCCCCGTCTGCTGCCATCAAACAAGAGAGTGGTACTGAAGTTACGTGTGACGCTTCTGTTCCTGTTTCTGAAAGCTCTATATCAAAGGAAATCGGTACATCGCCTGAGTGTGATGATGATCAAGTGGCTACAGCAGCACCTCATCCACCAACGCCATTATCTGATGCTACTGATGTATCTGCTGATGTGCAAATCCCAGCAGGAATATCGGAGGCAAAGCTAGAGCAGCCGAACGAAACGACTAGCCCGTCGGGTGCTGCTACTGAAGAAAATAATACTGTCGTGAGCACTCAGATTCCAACATTAGCTGAATCAGAAGATAGAACACCCGCCGATACTGCTATTCAAGGTACTGAGGTTGACAGCGCTGAGCCAGCATCTGTAAGTGATGACGAAAACAAGGTTACAGCAGCTGATGATAGTGCACTCCCGTCTACTGGGCCAGAGGATACAGCGGACGATAAAATTGATAGCAGCGCTGATGCTAGTGAGAAGTAG
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| Protein seq | DSHLPAALQSTESSQPTEHAAPTQDDGNGLQCEGTTVDVSGSKEDIMEVEEKLIDDISGSPSSHLPVALKSTESNQPAEHAVPAEDDGDGLQSEGTAVDVVDSKKDDMEVEEKQIDISRGSSSFLPGALESAELNQPAEHTAPTEDHGNCLQSEGTAVDVPCSKEDNMEVEDQFDGISRGPSSFSPDTLESAELNQAAEHAAPTEDDGNGPQSEGTSVDVAGSKEDNIEVEEKIDDISRGSSSHLPDVLQSTPNQRAEQECLDNSDDVNTSVVSSHAPLSGPKFTCVKELEKADETLETSDAQVADEVCLQTNDGAHNMASGSCSTLEDKNEDSSAQIADCEDLLLRKGTTVDDLDGCVEGHSGLSTHSNDEVRNLVEIVKGMNDTTAGSEVHVDPESHVSDEVSMPVAPSELKVELKNQSEPACQFGAVIVEESNVSLGIQTPALAESEEMTSGGFMHGKEVCASEQTNIGAAAEPASTKDDHDMHEVDKEIVHCTISSPIGDQENLQGNIDGKMDVGLAACQTESDFVSGNDHSRETDLAGSQAPYDASDKEDTAADLIGPKQATLEIEKMQIDGIPEGPSSVPAVLQLTDSNQPAEQERLENSDSKFASTKDQGRVDGTSNLSGGDNAKCSLTNDDSQTVNLVGYSPSEDSNDDDSVQAADSDGVLGNKEGTDDVISAACTDDVSMLKTESIDRHGSDEVDHSTAPSAAIKQESGTEVTCDASVPVSESSISKEIGTSPECDDDQVATAAPHPPTPLSDATDVSADVQIPAGISEAKLEQPNETTSPSGAATEENNTVVSTQIPTLAESEDRTPADTAIQGTEVDSAEPASVSDDENKVTAADDSALPSTGPEDTADDKIDSSADASEK |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0255300 | OsNip_06t0255300-01 | Chr06 | 8063404 | 8067361 | + | RAP2018-11-26 | ||
| CDS seq | GATAGTCATTTGCCCGCTGCTTTACAATCAACTGAGTCAAGCCAGCCCACAGAACATGCTGCCCCCACACAAGATGATGGCAATGGTCTGCAATGTGAAGGTACTACTGTTGATGTGTCTGGTTCTAAGGAAGATATTATGGAAGTTGAGGAGAAGCTGATTGATGATATTTCCGGAAGCCCTTCTAGTCATTTGCCTGTTGCTTTAAAATCAACTGAGTCAAATCAGCCTGCAGAACATGCTGTCCCCGCAGAAGATGATGGCGATGGTCTGCAAAGCGAAGGTACCGCTGTTGATGTGGTTGATTCCAAGAAAGATGATATGGAAGTTGAAGAAAAGCAGATTGATATCTCTAGAGGCTCATCTAGCTTTCTGCCTGGCGCTTTAGAATCAGCTGAATTAAATCAACCTGCAGAACATACTGCCCCCACAGAAGATCATGGCAATTGTCTCCAAAGTGAAGGTACTGCTGTTGATGTGCCTTGTTCCAAGGAAGATAATATGGAAGTTGAAGACCAGTTTGACGGTATTTCTAGAGGCCCATCTAGCTTTTCTCCTGACACTCTAGAATCAGCTGAGTTAAATCAAGCTGCAGAACATGCTGCCCCCACAGAAGATGATGGCAATGGTCCGCAAAGTGAAGGCACTTCTGTTGATGTGGCTGGTTCTAAGGAGGACAATATAGAAGTCGAAGAGAAGATTGATGATATCTCTAGAGGCTCGTCTAGTCATTTGCCTGATGTTTTACAGTCGACTCCAAATCAGCGTGCAGAGCAAGAGTGTTTAGATAATAGTGATGACGTGAACACATCTGTTGTTTCCTCCCATGCCCCATTAAGTGGCCCCAAATTTACATGTGTGAAAGAACTTGAAAAGGCAGATGAAACCTTGGAAACGAGTGATGCCCAAGTAGCAGATGAAGTCTGTTTACAGACAAATGATGGTGCTCACAATATGGCTTCAGGAAGTTGTTCCACTTTAGAAGACAAAAACGAGGACAGTTCTGCCCAAATAGCTGATTGTGAAGATTTATTGCTAAGGAAAGGAACTACTGTTGATGACCTTGATGGCTGTGTCGAAGGTCACAGTGGCTTGTCCACCCATTCCAATGATGAAGTGCGCAACCTGGTAGAAATTGTCAAGGGTATGAATGATACTACTGCTGGCAGTGAAGTGCATGTGGATCCTGAAAGTCATGTATCTGATGAAGTGTCAATGCCAGTTGCACCATCAGAGCTCAAGGTAGAATTGAAGAACCAATCAGAACCTGCCTGTCAGTTTGGGGCAGTGATCGTCGAGGAATCAAATGTCAGCTTGGGCATTCAGACTCCTGCATTAGCTGAATCAGAAGAAATGACATCAGGAGGTTTCATGCACGGTAAAGAAGTTTGTGCTTCAGAACAAACGAATATAGGTGCGGCTGCAGAACCTGCATCTACAAAAGATGATCATGATATGCATGAAGTTGATAAAGAGATTGTTCATTGTACAATATCTTCCCCCATAGGGGATCAGGAAAATCTGCAAGGTAACATTGATGGCAAGATGGACGTTGGCCTGGCGGCTTGCCAGACAGAGTCAGATTTTGTGAGTGGAAATGACCATTCTAGGGAGACTGATTTAGCAGGCAGCCAGGCACCTTATGATGCCTCGGATAAGGAAGATACTGCTGCTGATTTGATTGGTCCTAAGCAAGCCACTCTCGAGATCGAAAAAATGCAGATTGATGGTATTCCTGAAGGTCCTTCTAGCGTGCCTGCTGTTTTGCAGTTAACTGACTCAAATCAGCCAGCAGAACAAGAGAGATTAGAGAATAGTGACTCTAAATTTGCATCAACAAAGGACCAGGGCAGAGTGGATGGAACTTCCAATTTGAGTGGAGGTGATAATGCAAAGTGTAGTCTTACCAATGATGATTCTCAAACTGTGAATCTAGTAGGATATTCACCATCAGAAGACTCGAATGATGATGATTCTGTCCAAGCAGCTGATAGTGATGGCGTTCTGGGAAATAAAGAAGGTACTGATGATGTTATCTCTGCTGCATGTACCGATGATGTATCCATGCTGAAGACTGAATCAATAGATCGTCATGGTTCTGACGAAGTTGATCATTCCACTGCCCCGTCTGCTGCCATCAAACAAGAGAGTGGTACTGAAGTTACGTGTGACGCTTCTGTTCCTGTTTCTGAAAGCTCTATATCAAAGGAAATCGGTACATCGCCTGAGTGTGATGATGATCAAGTGGCTACAGCAGCACCTCATCCACCAACGCCATTATCTGATGCTACTGATGTATCTGCTGATGTGCAAATCCCAGCAGGAATATCGGAGGCAAAGCTAGAGCAGCCGAACGAAACGACTAGCCCGTCGGGTGCTGCTACTGAAGAAAATAATACTGTCGTGAGCACTCAGATTCCAACATTAGCTGAATCAGAAGATAGAACACCCGCCGATACTGCTATTCAAGGTACTGAGGTTGACAGCGCTGAGCCAGCATCTGTAAGTGATGACGAAAACAAGGTTACAGCAGCTGATGATAGTGCACTCCCGTCTACTGGGCCAGAGGATACAGCGGACGATAAAATTGATAGCAGCGCTGATGCTAGTGAGAAGTAG
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| Protein seq | DSHLPAALQSTESSQPTEHAAPTQDDGNGLQCEGTTVDVSGSKEDIMEVEEKLIDDISGSPSSHLPVALKSTESNQPAEHAVPAEDDGDGLQSEGTAVDVVDSKKDDMEVEEKQIDISRGSSSFLPGALESAELNQPAEHTAPTEDHGNCLQSEGTAVDVPCSKEDNMEVEDQFDGISRGPSSFSPDTLESAELNQAAEHAAPTEDDGNGPQSEGTSVDVAGSKEDNIEVEEKIDDISRGSSSHLPDVLQSTPNQRAEQECLDNSDDVNTSVVSSHAPLSGPKFTCVKELEKADETLETSDAQVADEVCLQTNDGAHNMASGSCSTLEDKNEDSSAQIADCEDLLLRKGTTVDDLDGCVEGHSGLSTHSNDEVRNLVEIVKGMNDTTAGSEVHVDPESHVSDEVSMPVAPSELKVELKNQSEPACQFGAVIVEESNVSLGIQTPALAESEEMTSGGFMHGKEVCASEQTNIGAAAEPASTKDDHDMHEVDKEIVHCTISSPIGDQENLQGNIDGKMDVGLAACQTESDFVSGNDHSRETDLAGSQAPYDASDKEDTAADLIGPKQATLEIEKMQIDGIPEGPSSVPAVLQLTDSNQPAEQERLENSDSKFASTKDQGRVDGTSNLSGGDNAKCSLTNDDSQTVNLVGYSPSEDSNDDDSVQAADSDGVLGNKEGTDDVISAACTDDVSMLKTESIDRHGSDEVDHSTAPSAAIKQESGTEVTCDASVPVSESSISKEIGTSPECDDDQVATAAPHPPTPLSDATDVSADVQIPAGISEAKLEQPNETTSPSGAATEENNTVVSTQIPTLAESEDRTPADTAIQGTEVDSAEPASVSDDENKVTAADDSALPSTGPEDTADDKIDSSADASEK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0255300 | OsNip_06t0255300-02 | Chr06 | 8065972 | 8067344 | + | RAP2018-11-26 | ||
| CDS seq | AAAGAGATTGTTCATTGTACAATATCTTCCCCCATAGGGGATCAGGAAAATCTGCAAGGTAACATTGATGGCAAGATGGACGTTGGCCTGGCGGCTTGCCAGACAGAGTCAGATTTTGTGAGTGGAAATGACCATTCTAGGGAGACTGATTTAGCAGGCAGCCAGGCACCTTATGATGCCTCGGATAAGGAAGATACTGCTGCTGATTTGATTGGTCCTAAGCAAGCCACTCTCGAGATCGAAAAAATGCAGATTGATGGTATTCCTGAAGGTCCTTCTAGCGTGCCTGCTGTTTTGCAGTTAACTGACTCAAATCAGCCAGCAGAACAAGAGAGATTAGAGAATAGTGACTCTAAATTTGCATCAACAAAGGACCAGGGCAGAGTGGATGGAACTTCCAATTTGAGTGGAGGTGATAATGCAAAGTGTAGTCTTACCAATGATGATTCTCAAACTGTGAATCTAGTAGGATATTCACCATCAGAAGACTCGAATGATGATGATTCTGTCCAAGCAGCTGATAGTGATGGCGTTCTGGGAAATAAAGAAGGTACTGATGATGTTATCTCTGCTGCATGTACCGATGATGTATCCATGCTGAAGACTGAATCAATAGATCGTCATGGTTCTGACGAAGTTGATCATTCCACTGCCCCGTCTGCTGCCATCAAACAAGAGAGTGGTACTGAAGTTACGTGTGACGCTTCTGTTCCTGTTTCTGAAAGCTCTATATCAAAGGAAATCGGTACATCGCCTGAGTGTGATGATGATCAAGTGGCTACAGCAGCACCTCATCCACCAACGCCATTATCTGATGCTACTGATGTATCTGCTGATGTGCAAATCCCAGCAGGAATATCGGAGGCAAAGCTAGAGCAGCCGAACGAAACGACTAGCCCGTCGGGTGCTGCTACTGAAGAAAATAATACTGTCGTGAGCACTCAGATTCCAACATTAGCTGAATCAGAAGATAGAACACCCGCCGATACTGCTATTCAAGGTACTGAGGTTGACAGCGCTGAGCCAGCATCTGTAAGTGATGACGAAAACAAGGTTACAGCAGCTGATGATAGTGCACTCCCGTCTACTGGGCCAGAGGATACAGCGGACGATAAAATTGATAGCAGCGCTGATGCTAGTGAGAAGTAG
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| Protein seq | KEIVHCTISSPIGDQENLQGNIDGKMDVGLAACQTESDFVSGNDHSRETDLAGSQAPYDASDKEDTAADLIGPKQATLEIEKMQIDGIPEGPSSVPAVLQLTDSNQPAEQERLENSDSKFASTKDQGRVDGTSNLSGGDNAKCSLTNDDSQTVNLVGYSPSEDSNDDDSVQAADSDGVLGNKEGTDDVISAACTDDVSMLKTESIDRHGSDEVDHSTAPSAAIKQESGTEVTCDASVPVSESSISKEIGTSPECDDDQVATAAPHPPTPLSDATDVSADVQIPAGISEAKLEQPNETTSPSGAATEENNTVVSTQIPTLAESEDRTPADTAIQGTEVDSAEPASVSDDENKVTAADDSALPSTGPEDTADDKIDSSADASEK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 24.329025 | 20.524542 | 31.909119 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0255300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0010290 | RBH | 6.080438 | 75.541862 | 63.586163 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0010170 | RBH | 3.659543 | 28.165691 | 29.715464 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0010150 | RBH | 13.399948 | 65.769859 | 130.316605 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0010170 | SBH | 2.341082 | 1.971782 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0010250 | RBH | 51.388412 | 95.572693 | 134.819305 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0133000 | RBH | 40.8669815 | 152.2453155 | 114.8898695 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0009820 | RBH | 3.937860 | 6.254972 | 19.835175 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0136200 | SBH | 50.1005115 | 181.3404235 | 90.500805 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0010250 | SBH | 3.504740 | 2.080202 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0010100 | SBH | 7.516368 | 130.034805 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0010130 | RBH | 41.545937 | 214.846817 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0010290 | RBH | 4.486175 | 5.206415 | 6.574339 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0010030 | RBH | 3.081915 | 83.114510 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G009950 | RBH | 4.385936 | 37.315823 | 21.959597 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0010250 | RBH | 12.336181 | 134.019485 | 49.353424 |
